BAC Information

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BAC

Clone NameB6Ng01-214K05
Chromosome7 (Build37)
Map Location 90,393,871 - 90,395,037
singlet/doubletsinglet
Overlap genenone
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214K05.bB6Ng01-214K05.g
ACCGA031835GA031836
length1,1811,255
definitionB6Ng01-214K05.b B6Ng01-214K05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gattcttttgaatgcaaaggaagccttgctgaaacaaaatggatatcagc
catcttgctattacccagtttaggagcatttggtgtcagtgagcagaact
ctattcatcaagtcaggagtatgccttgtcagagagagagtggtgagctc
agtctattgctgtgcaatcagtgtgagtggaaatgtgttccctgactggt
gttactcaagaaacttgatgagaataaactttcaagtgatacctgaatca
gagaatatttacaaggaaaaagtatgaatcggaaccacctttatcctgtg
aaatgtaaggttggcatcacagttgatctggaggaagagaaaatcgcctt
ggaactctgtattaagctaaagagtcttgtgaagaaaaaaaaaaataaca
gaatagatgcacttattgagtactgtgtacatcaaaggaaaattaaatgt
gtgcttaatggagacagaatctatttcttttaaggtagaatcctaggaca
aataaaatttaagaagtgtccttggaatatctggatcaagagggaaatac
agaaaaaatagaaacaagaaaaaagaactttaaaagatggaaaaatggat
gcatatccatagctttgtttacattgtccaaaatgcagaagcagtacaag
tgttgactgatggatggttgctgaggtacaaacaactcaacggaacagta
actagtcagctttaaaagcaaaggggttgctgacccaggctatggtatgg
gtgatccttgaggacagtgtgctgtgttaaataagtcagacatcagcaag
ccactgctgagtgactccattttatatgcagctcctagagctgccaactt
cacggaatcaggcactagaatggtggttgtcaggagctttcaagaggcag
gaatgaggacaattgttgaatgcgttatagacatcctgtttgtaaggtgg
ataagagtaattgcatcccaaggtacacatatgttgaccacatttcagat
attatatatttaaattacatttaaaaggatcttatattttggtccacacc
tgaaaaagaaatttgaaaattatcagacacccagaagctagaaattttgg
agaatggcttattcagcatagtaccaagttaacaggtagagcaaaatacc
atttttctcagcaagtttgtttaaattgatc
gaattcaaaaaggtggactccagaaaatcaaataaccccattaaaaaatg
gggctcagagctaaacaaagaattctcacctgaggaataccgaatggctg
agaaacacatgaaaagatgttcagcatccttaatcatcagggacatgcaa
atcaaaacaaccctgagattccatctcacaccagtcagaatggctaagat
caaaaattcaggtgacagcagatgctggcttgatgtggagaaagaggaac
actccttcattgttggtgggattacaagcttatacaaccactctggaaat
cagtctggtggtttctcagaaaattggacatggtactaccggaggatcct
gcaatacctctcctgggcatatatccagaagatgttcaaactagtaagaa
agaaacatgcttcactatgttcatagcagccttatttataatagccagaa
gctggcaagaacccagatgcccctcaacaaaggaatggatacaaaaatgt
ggtacatttacacaatggagtactactcagctgttaaaaagaatgaattt
atgaaattcctaggcaaatggttggacctggagggcattatcctgagtga
ggtaacccaatcacaaaagaactcaaatgatatgtactcactgataagtg
aatattagcccagaaacttagaatacccaatatataagttacaattttca
aaacacatgaaactcaagaagaacgaaaaccaaagtgtgggcactttgcc
ccttcttataattgggaataaaacacccatggaaggaggtacagagacaa
aatttggagctgcacaaaaggatggaccgtctagagactgccatatccag
ggatccatcccataatcatcctccaaacgttgacaccattgcatacacta
gcaagattgtgctgaaaggacccagatatagctgtctcttgtgagactat
gctggggcctagcaaacacataagtggatgctcaacagtcagctattggg
cagatcacaggccccaatggagggagctagaagaaaatacctaaggagct
caggattctgcaacccttataggtgcaacaacattatgaactaacccagt
accccagagcttcttgactctagctgcatatgtctcaaagatgtctattc
cggccatcactgagagagaagaaccattggactgcaactttattggccag
atacaggtacgccagtcccaaagtgtgaatgagtggtgtggctaagacgc
acata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90393871_90395037
seq2: B6Ng01-214K05.b_37_1216

seq1  ATTCTTTTGAATGCAAAGGAAGCCTTGCTGAAACAAAATGGATATCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTGAATGCAAAGGAAGCCTTGCTGAAACAAAATGGATATCAGCC  50

seq1  ATCTTGCTATTACCCAGTTTAGGAGCATTTGGTGTCAGTGAGCAGAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCTATTACCCAGTTTAGGAGCATTTGGTGTCAGTGAGCAGAACTC  100

seq1  TATTCATCAAGTCAGGAGTATGCCTTGTCAGAGAGAGAGTGGTGAGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATCAAGTCAGGAGTATGCCTTGTCAGAGAGAGAGTGGTGAGCTCA  150

seq1  GTCTATTGCTGTGCAATCAGTGTGAGTGGAAATGTGTTCCCTGACTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTGCTGTGCAATCAGTGTGAGTGGAAATGTGTTCCCTGACTGGTG  200

seq1  TTACTCAAGAAACTTGATGAGAATAAACTTTCAAGTGATACCTGAATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAAGAAACTTGATGAGAATAAACTTTCAAGTGATACCTGAATCAG  250

seq1  AGAATATTTACAAGGAAAAAGTATGAATCGGAACCACCTTTATCCTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTACAAGGAAAAAGTATGAATCGGAACCACCTTTATCCTGTGA  300

seq1  AATGTAAGGTTGGCATCACAGTTGATCTGGAGGAAGAGAAAATCGCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGGTTGGCATCACAGTTGATCTGGAGGAAGAGAAAATCGCCTTG  350

seq1  GAACTCTGTATTAAGCTAAAGAGTCTTGTGAAGAAAAAAAAAAATAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGTATTAAGCTAAAGAGTCTTGTGAAGAAAAAAAAAAATAACAG  400

seq1  AATAGATGCACTTATTGAGTACTGTGTACATCAAAGGAAAATTAAATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGCACTTATTGAGTACTGTGTACATCAAAGGAAAATTAAATGTG  450

seq1  TGCTTAATGGAGACAGAATCTATTTCTTTTAAGGTAGAATCCTAGGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAATGGAGACAGAATCTATTTCTTTTAAGGTAGAATCCTAGGACAA  500

seq1  ATAAAATTTAAGAAGTGTCCTTGGAATATCTGGATCAAGAGGGAAATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTTAAGAAGTGTCCTTGGAATATCTGGATCAAGAGGGAAATACA  550

seq1  GAAAAAATAGAAACAAGAAAAAAGAACTTTAAAAGATGGAAAAATGGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATAGAAACAAGAAAAAAGAACTTTAAAAGATGGAAAAATGGATG  600

seq1  CATATCCATAGCTTTGTTTACATTGTCCAAAATGCAGAAGCAGTACAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCATAGCTTTGTTTACATTGTCCAAAATGCAGAAGCAGTACAAGT  650

seq1  GTTGACTGATGGATGGTTGCTGAGGTACAAACAACTCAACGGAACAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTGATGGATGGTTGCTGAGGTACAAACAACTCAACGGAACAGTAA  700

seq1  CTAGTCAGCTTTAAAAGCAAAGGGGTTGCTGACCCAGGCTATGGTATGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCAGCTTTAAAAGCAAAGGGGTTGCTGACCCAGGCTATGGTATGGG  750

seq1  TGATCCTTGAGGACAGTGTGCTGTGTTAAATAAGTCAGACATCAGCAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTGAGGACAGTGTGCTGTGTTAAATAAGTCAGACATCAGCAAGC  800

seq1  CACTGCTGAGTGACTCCA-TTTATATGCAGCTCCTAGAGCTGCCAACTTC  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CACTGCTGAGTGACTCCATTTTATATGCAGCTCCTAGAGCTGCCAACTTC  850

seq1  ACGGAATCAGGCACTAGAATGGTGGTTGTCAGGAGC-TTCAAGAGGCAGG  898
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACGGAATCAGGCACTAGAATGGTGGTTGTCAGGAGCTTTCAAGAGGCAGG  900

seq1  AATGAGGACAATTGTTGAATGCGTTATAGACATCCTGTTTGTAAGGTGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGACAATTGTTGAATGCGTTATAGACATCCTGTTTGTAAGGTGGA  950

seq1  TAAGAGTAATTGCATCCCAAGGTACACATATG-TGACCACA-TTCAGATA  996
      |||||||||||||||||||||||||||||||| |||||||| ||||||||
seq2  TAAGAGTAATTGCATCCCAAGGTACACATATGTTGACCACATTTCAGATA  1000

seq1  -TATATATTTAAATACCATTTAAAA-GATC-TATATTTTG--TCACAACT  1041
       |||||||||||||  ||||||||| |||| |||||||||   |||| ||
seq2  TTATATATTTAAATTACATTTAAAAGGATCTTATATTTTGGTCCACACCT  1050

seq1  G--AAAGAAATTTGAAAATTATCAG-GACCCAGAAGCAGGAAATTTTTGA  1088
      |  ||||||||||||||||||||||  ||||||||||  |||||||| ||
seq2  GAAAAAGAAATTTGAAAATTATCAGACACCCAGAAGCTAGAAATTTTGGA  1100

seq1  GATAGCCTTTATTCAGCATAGTAACAAGTTAAACATGTAGAGCAACATAC  1138
      ||  | | ||||||||||||||| |||||| |||| ||||||||| ||||
seq2  GAATGGC-TTATTCAGCATAGTACCAAGTT-AACAGGTAGAGCAAAATAC  1148

seq1  CA--TTTCTCAGCAAAGTTG-TTAAATTGATC  1167
      ||  |||||||||||  ||| |||||||||||
seq2  CATTTTTCTCAGCAAGTTTGTTTAAATTGATC  1180