BAC Information

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BAC

Clone NameB6Ng01-214P04
Chromosome7 (Build37)
Map Location 149,711,573 - 149,856,337
singlet/doubletdoublet
Overlap geneMrpl23, Nctc1, H19, Igf2, Igf2as
Upstream geneChid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3
Downstream geneIns2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214P04.bB6Ng01-214P04.g
ACCGA032057GA032058
length9111,066
definitionB6Ng01-214P04.b B6Ng01-214P04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,855,431 - 149,856,337)(149,711,573 - 149,712,634)
sequence
gaattctaaattgagtgtccatgaaacatgaggcgacaagatggcgctgt
gccacaaggatacaccacacccggaagaccttagaaagtaattttaatat
ttattttaaatccggaccctaatttgcataagccacgcccctttttacct
gtgccacgcccacagacattccagggtgtcaggtgactgccaggtgtcaa
tccagtgaagccccacccactctccacccctgcacatagtccctaccccc
tagctaacaggaagtgcttctagcttaattcaaacctgcatagacgcctt
cctgtctgtcaggcaggggccaaagccccaccctctaatgcccccatacc
ctagtgtgggaaagcgccatagccagctgccccataagtctttgcagtac
tttactggcatatcatttcccaaatttggagggggctggaagtgggcgtg
gaggggacgaggtgagggataaaagcgtggtgtcattcgagcaggtgcct
tactcagtggtggagagcagaagccacttctaggggctctgttatcatgc
acgctctaaaactccctctcaccgtctcttcagactcagactcagcccct
tccagccccgccgcaacatcgtcgccccggctggagggcccgggcaccac
aaccagagcaccccctgctttggagggggctgctaatattgacccagcca
gcggatcatcgtccgggcaatttcggaagagaatcttgggcaccagtgac
tccccggtccctcttttatccaccgtccgggaactttcaggaactacgaa
gcgacttagagtacaggtaactaattgatttccccttgttcatgcctttt
gtgtatgagtgaatgttgcagcttaaatattctggtgtgggcaggcggtt
ggggactggga
gaattcccaggcctcaggcaggaagggaacaaggtggagccccaagatac
tcgagtgaaagagctgagctgagggtctgaggaactgaggtaactgtagt
tcaagaaacagactccgagggggcagggcagtgctgcacagtgggagaac
ctggggcccagcaagcatggttggggccaacacaagcctgggaaacagac
ctctgtgtgctgcagattcccatgcccaggaatggtggctgttcccacca
gccagggcagagggctgcaggctcacaggtcttgggtctgggaaaccttg
cccaagtcttgaggacctttggccttgagctgaacattcttctagacctg
cctgtgagaaatcataaaaacaagacctgaaagatccaactcccccgctc
tgcgcccccctcctccctgcctctgtgtgtgtgtgttttgagatagggtt
acagcctgcctactcagtttctacactgctagagatcaaacccaggcttc
gtgtgtgttgggcatgcagtctatcaactacaaagctcaaaaatatttat
agaaatgtgaagatattgggcacttgctgaggcaaaactcaggatgtccg
gggtcccataaaacccatcaagcagaaacaaagcaagaaaggtagcacac
ggggtgggggtcaccaggccaaagcaaatgggaggaagctgaatgaaacc
ccaagatactcactgagacagactgcaggaggcacagctgtaaggccatg
gagggaaaaaaaaatgtcacaaagagatgaacacaaaagttcaaaatcaa
cgtgctgtggagcaaggagtggggcagccagttgggtagggggaccatgg
gacaaaatcaaccagctataaagttgtgtgggctgaacacgggtctgacc
accacaggaaggcagggtcactcagaacagaacatggtgcttagcatgca
tggggtcctgactccatctctagcaaaacaaactaatgggaattcgtcaa
acatcccaggtaagctgtaggctgcaaactgaactgggaatatgggcttc
caccattcgtacttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149855431_149856337
seq2: B6Ng01-214P04.b_45_955 (reverse)

seq1  TCCCAAGTCCCCAGCCACCTACCCACACCAGAATATTTAAACTGC-ACCT  49
      |||| |||||||| || ||| ||||||||||||||||||| |||| || |
seq2  TCCC-AGTCCCCAACCGCCTGCCCACACCAGAATATTTAAGCTGCAACAT  49

seq1  TCACTCATACACAAAAGGCATGAACAAGGGGAAATCAATTAGTTACCTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATACACAAAAGGCATGAACAAGGGGAAATCAATTAGTTACCTGT  99

seq1  ACTCT-AGTCGCTTCGTAGTTCCTG-AAGTTCCCGGACGGTGGAT-AAAG  146
      ||||| ||||||||||||||||||| ||||||||||||||||||| ||||
seq2  ACTCTAAGTCGCTTCGTAGTTCCTGAAAGTTCCCGGACGGTGGATAAAAG  149

seq1  A-GGACCGGGGAGTCACTGGTGCCCAAGATTCTCTTCCGAAATTGCCCGG  195
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCGGGGAGTCACTGGTGCCCAAGATTCTCTTCCGAAATTGCCCGG  199

seq1  ACGATGATCCGCTGGCTGGGTCAATATTAGCAGCCCCCTCCAAAGCAGGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGATCCGCTGGCTGGGTCAATATTAGCAGCCCCCTCCAAAGCAGGG  249

seq1  GGTGCTCTGGTTGTGGTGCCCGGGCCCTCCAGCCGGGGCGACGATGTTGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCTGGTTGTGGTGCCCGGGCCCTCCAGCCGGGGCGACGATGTTGC  299

seq1  GGCGGGGCTGGAAGGGGCTGAGTCTGAGTCTGAAGAGACGGTGAGAGGGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCTGGAAGGGGCTGAGTCTGAGTCTGAAGAGACGGTGAGAGGGA  349

seq1  GTTTTAGAGCGTGCATGATAACAGAGCCCCTAGAAGTGGCTTCTGCTCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAGCGTGCATGATAACAGAGCCCCTAGAAGTGGCTTCTGCTCTC  399

seq1  CACCACTGAGTAAGGCACCTGCTCGAATGACACCACGCTTTTATCCCTCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGAGTAAGGCACCTGCTCGAATGACACCACGCTTTTATCCCTCA  449

seq1  CCTCGTCCCCTCCACGCCCACTTCCAGCCCCCTCCAAATTTGGGAAATGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTCCCCTCCACGCCCACTTCCAGCCCCCTCCAAATTTGGGAAATGA  499

seq1  TATGCCAGTAAAGTACTGCAAAGACTTATGGGGCAGCTGGCTATGGCGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCAGTAAAGTACTGCAAAGACTTATGGGGCAGCTGGCTATGGCGCT  549

seq1  TTCCCACACTAGGGTATGGGGGCATTAGAGGGTGGGGCTTTGGCCCCTGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACACTAGGGTATGGGGGCATTAGAGGGTGGGGCTTTGGCCCCTGC  599

seq1  CTGACAGACAGGAAGGCGTCTATGCAGGTTTGAATTAAGCTAGAAGCACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGACAGGAAGGCGTCTATGCAGGTTTGAATTAAGCTAGAAGCACT  649

seq1  TCCTGTTAGCTAGGGGGTAGGGACTATGTGCAGGGGTGGAGAGTGGGTGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTAGCTAGGGGGTAGGGACTATGTGCAGGGGTGGAGAGTGGGTGG  699

seq1  GGCTTCACTGGATTGACACCTGGCAGTCACCTGACACCCTGGAATGTCTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCACTGGATTGACACCTGGCAGTCACCTGACACCCTGGAATGTCTG  749

seq1  TGGGCGTGGCACAGGTAAAAAGGGGCGTGGCTTATGCAAATTAGGGTCCG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGTGGCACAGGTAAAAAGGGGCGTGGCTTATGCAAATTAGGGTCCG  799

seq1  GATTTAAAATAAATATTAAAATTACTTTCTAAGGTCTTCCGGGTGTGGTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAAATAAATATTAAAATTACTTTCTAAGGTCTTCCGGGTGTGGTG  849

seq1  TATCCTTGTGGCACAGCGCCATCTTGTCGCCTCATGTTTCATGGACACTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTGTGGCACAGCGCCATCTTGTCGCCTCATGTTTCATGGACACTC  899

seq1  AATTTAGAATTC  907
      ||||||||||||
seq2  AATTTAGAATTC  911

seq1: chr7_149711573_149712634
seq2: B6Ng01-214P04.g_69_1134

seq1  GAATTCCCAGGCCTCAGGCAGGAAGGGAACAAGGTGGAGCCCCAAGATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGGCCTCAGGCAGGAAGGGAACAAGGTGGAGCCCCAAGATAC  50

seq1  TCGAGTGAAAGAGCTGAGCTGAGGGTCTGAGGAACTGAGGTAACTGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTGAAAGAGCTGAGCTGAGGGTCTGAGGAACTGAGGTAACTGTAGT  100

seq1  TCAAGAAACAGACTCCGAGGGGGCAGGGCAGTGCTGCACAGTGGGAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAACAGACTCCGAGGGGGCAGGGCAGTGCTGCACAGTGGGAGAAC  150

seq1  CTGGGGCCCAGCAAGCATGGTTGGGGCCAACACAAGCCTGGGAAACAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCCCAGCAAGCATGGTTGGGGCCAACACAAGCCTGGGAAACAGAC  200

seq1  CTCTGTGTGCTGCAGATTCCCATGCCCAGGAATGGTGGCTGTTCCCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTGCTGCAGATTCCCATGCCCAGGAATGGTGGCTGTTCCCACCA  250

seq1  GCCAGGGCAGAGGGCTGCAGGCTCACAGGTCTTGGGTCTGGGAAACCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCAGAGGGCTGCAGGCTCACAGGTCTTGGGTCTGGGAAACCTTG  300

seq1  CCCAAGTCTTGAGGACCTTTGGCCTTGAGCTGAACATTCTTCTAGACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTCTTGAGGACCTTTGGCCTTGAGCTGAACATTCTTCTAGACCTG  350

seq1  CCTGTGAGAAATCATAAAAACAAGACCTGAAAGATCCAACTCCCCCGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAGAAATCATAAAAACAAGACCTGAAAGATCCAACTCCCCCGCTC  400

seq1  TGCGCCCCCCTCCTCCCTGCCTCTGTGTGTGTGTGTTTTGAGATAGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCCCCCTCCTCCCTGCCTCTGTGTGTGTGTGTTTTGAGATAGGGTT  450

seq1  ACAGCCTGCCTACTCAGTTTCTACACTGCTAGAGATCAAACCCAGGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTGCCTACTCAGTTTCTACACTGCTAGAGATCAAACCCAGGCTTC  500

seq1  GTGTGTGTTGGGCATGCAGTCTATCAACTACAAAGCTCAAAAATATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTGGGCATGCAGTCTATCAACTACAAAGCTCAAAAATATTTAT  550

seq1  AGAAATGTGAAGATATTGGGCACTTGCTGAGGCAAAACTCAGGATGTCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTGAAGATATTGGGCACTTGCTGAGGCAAAACTCAGGATGTCCG  600

seq1  GGGTCCCATAAAACCCATCAAGCAGAAACAAAGCAAGAAAGGTAGCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCATAAAACCCATCAAGCAGAAACAAAGCAAGAAAGGTAGCACAC  650

seq1  GGGGTGGGGGTCACCAGGCCAAAGCAAATGGGAGGAAGCTGAATGAAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGTCACCAGGCCAAAGCAAATGGGAGGAAGCTGAATGAAACC  700

seq1  CCAAGATACTCACTGAGACAGACTGCAGGAGGCACAGCTGTAAGGCCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATACTCACTGAGACAGACTGCAGGAGGCACAGCTGTAAGGCCATG  750

seq1  GAGGGAAAAAAAAATGTCACAAAGAGATGAACACAAAAGTTC-AAATCAA  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAGGGAAAAAAAAATGTCACAAAGAGATGAACACAAAAGTTCAAAATCAA  800

seq1  CGTGCTGTGGAGCAGGGAGTGGGGCAGCCAGTTGGGTAGGGGGACCATGG  849
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CGTGCTGTGGAGCAAGGAGTGGGGCAGCCAGTTGGGTAGGGGGACCATGG  850

seq1  GACAAAA-CAAGCAGCTATAAAG-TGTGTGGGCTGAACACGGTCCTGACC  897
      ||||||| ||| ||||||||||| ||||||||||||||||||  ||||||
seq2  GACAAAATCAACCAGCTATAAAGTTGTGTGGGCTGAACACGGGTCTGACC  900

seq1  A-CACAGG-AGGCAGGGTCACTCAG-ACAGAACAT-GTGCTTAGCATGCA  943
      | |||||| |||||||||||||||| ||||||||| ||||||||||||||
seq2  ACCACAGGAAGGCAGGGTCACTCAGAACAGAACATGGTGCTTAGCATGCA  950

seq1  TGGGGTCCTGACTTCCATCTCTAGCAAAACAAAACTATGGG-ATTCGTCT  992
      |||||||||||| ||||||||||||||||||||   ||||| ||||||| 
seq2  TGGGGTCCTGAC-TCCATCTCTAGCAAAACAAACTAATGGGAATTCGTC-  998

seq1  AAACATCCCAGGTAAGCTGTAGGCTGCAAACTGGAGCTGGGGAATAT-GG  1041
      |||||||||||||||||||||||||||||||| || || |||||||| ||
seq2  AAACATCCCAGGTAAGCTGTAGGCTGCAAACT-GAACT-GGGAATATGGG  1046

seq1  CTTCAACCATTCAGTACTTGT  1062
      |||| ||||||| ||||||||
seq2  CTTCCACCATTC-GTACTTGT  1066