BAC Information

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BAC

Clone NameB6Ng01-215H05
Chromosome7 (Build37)
Map Location 49,726,263 - 49,727,432
singlet/doubletsinglet
Overlap genenone
Upstream geneEG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503
Downstream geneBC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215H05.b
ACCGA032416
length1,155
definitionB6Ng01-215H05.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtagcagtaatatattagtccagtttaattcccatagttgcat
ttttgtcatctggtaatttaaagagaatgaaacgaatacagaagtttaag
tgtattggttcctgaggtctaaaccatatgccaagaaatgataattagga
agccatcagtatatcttctgttcccactatccgctgggtacagttctgta
aaaaccgcaacaacattcaatataatgtagaggaggaggtttcttctaat
gcaaagacttttctgtattgaaaccaaagttagtcatctatcttgaataa
aacaggaagcagaggtcatggaagcaggtaagtgggaatgaaacaatatt
taatgtgatcagtctaaaggaaaagaatccaggcagatggtaaggttgaa
tggacctcttcactagctttggaagatcctttcacttagaatcatataat
caaaatgtactatagtatcctatggactaaaagatttttgctttatttca
tctgaatagtactaaattgacatatgggagtagcagtctgacaatttgtg
tttaggttattagttattaggtgttaaactacaagttcgtatttttctgt
ttcataccagtacttgttcttgagcacttttatttattaaaaatttcatt
attcattattgtatattctaacatattcttccttctagattctcttaagc
agccttttctcagatgtaagtttatgctctttatctcataaaaataattt
taagccttccgcaagggcaaattatcagctggtctgaagactccacagtc
tgaagtcctcacctgctacagccagggtcataggtatcccagggacacag
gaggcaggctccggacagaaacacacaagccagtaaacagcagagataac
cagatggtgagaggcaagtgaaggattgtaagtaatagaagccactatac
ttttgcaccatcagaactcccaccattcagggcccaaaacaccaaataga
aacaagagaacattcaagaatcaaaccgaaagccagttcttgagaaaatc
acaggatagatagacctagcaaaactaactaagggtacgaagacagtgtc
aggttaacaatcgaattgaaaaaaataagacggaaactgagaaaataaag
aaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_49726263_49727432
seq2: B6Ng01-215H05.b_38_1192 (reverse)

seq1  TTTTTTTTTATTTCCTCAGTTTCTGTTCTTATTTTTTTCATTTCTGATTT  50
      ||||| ||||||| ||||||||| | |||||||||||||| ||| ||  |
seq2  TTTTTCTTTATTTTCTCAGTTTCCG-TCTTATTTTTTTCAATTC-GA--T  46

seq1  TGTTAACTTGGACACTGTCTCTGTACCCTTTAGTTAGTTTTGCTAGGGTC  100
      ||||||| | ||||||||||  |||||| |||||||||||||||| ||||
seq2  TGTTAACCT-GACACTGTCTTCGTACCC-TTAGTTAGTTTTGCTA-GGTC  93

seq1  TTATCTATCTTGTTGATTTTCTCAAAGAACTGGCTTTTCGTTTTGATTCT  150
       |||||||| || |||||||||| |||||||||| ||||| |||||||| 
seq2  -TATCTATCCTG-TGATTTTCTC-AAGAACTGGC-TTTCGGTTTGATTC-  138

seq1  TTGAATTGTTCTCTTTGTTTCTATTTGGTTGTTTTTGGCCCTGAATGGTG  200
      ||||| ||||||| |||||||||||||| |||||| ||||||||||||||
seq2  TTGAA-TGTTCTC-TTGTTTCTATTTGG-TGTTTTGGGCCCTGAATGGTG  185

seq1  GGAGTTCTGATGGTGCAAAAGTATAGTGGCTTCTATTACTTACAATCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCTGATGGTGCAAAAGTATAGTGGCTTCTATTACTTACAATCCTT  235

seq1  CACTTGCCTCTCACCATCTGGTTATCTCTGCTGTTTACTGGCTTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCCTCTCACCATCTGGTTATCTCTGCTGTTTACTGGCTTGTGTGT  285

seq1  TTCTGTCCGGAGCCTGCCTCCTGTGTCCCTGGGATACCTATGACCCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCGGAGCCTGCCTCCTGTGTCCCTGGGATACCTATGACCCTGGC  335

seq1  TGTAGCAGGTGAGGACTTCAGACTGTGGAGTCTTCAGACCAGCTGATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAGGTGAGGACTTCAGACTGTGGAGTCTTCAGACCAGCTGATAAT  385

seq1  TTGCCCTTGCGGAAGGCTTAAAATTATTTTTATGAGATAAAGAGCATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTTGCGGAAGGCTTAAAATTATTTTTATGAGATAAAGAGCATAAA  435

seq1  CTTACATCTGAGAAAAGGCTGCTTAAGAGAATCTAGAAGGAAGAATATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATCTGAGAAAAGGCTGCTTAAGAGAATCTAGAAGGAAGAATATGT  485

seq1  TAGAATATACAATAATGAATAATGAAATTTTTAATAAATAAAAGTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATACAATAATGAATAATGAAATTTTTAATAAATAAAAGTGCTCA  535

seq1  AGAACAAGTACTGGTATGAAACAGAAAAATACGAACTTGTAGTTTAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGTACTGGTATGAAACAGAAAAATACGAACTTGTAGTTTAACAC  585

seq1  CTAATAACTAATAACCTAAACACAAATTGTCAGACTGCTACTCCCATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAACTAATAACCTAAACACAAATTGTCAGACTGCTACTCCCATATG  635

seq1  TCAATTTAGTACTATTCAGATGAAATAAAGCAAAAATCTTTTAGTCCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTAGTACTATTCAGATGAAATAAAGCAAAAATCTTTTAGTCCATA  685

seq1  GGATACTATAGTACATTTTGATTATATGATTCTAAGTGAAAGGATCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTATAGTACATTTTGATTATATGATTCTAAGTGAAAGGATCTTCC  735

seq1  AAAGCTAGTGAAGAGGTCCATTCAACCTTACCATCTGCCTGGATTCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGTGAAGAGGTCCATTCAACCTTACCATCTGCCTGGATTCTTTT  785

seq1  CCTTTAGACTGATCACATTAAATATTGTTTCATTCCCACTTACCTGCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGACTGATCACATTAAATATTGTTTCATTCCCACTTACCTGCTTC  835

seq1  CATGACCTCTGCTTCCTGTTTTATTCAAGATAGATGACTAACTTTGGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTCTGCTTCCTGTTTTATTCAAGATAGATGACTAACTTTGGTTT  885

seq1  CAATACAGAAAAGTCTTTGCATTAGAAGAAACCTCCTCCTCTACATTATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAGAAAAGTCTTTGCATTAGAAGAAACCTCCTCCTCTACATTATA  935

seq1  TTGAATGTTGTTGCGGTTTTTACAGAACTGTACCCAGCGGATAGTGGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGTTGTTGCGGTTTTTACAGAACTGTACCCAGCGGATAGTGGGAA  985

seq1  CAGAAGATATACTGATGGCTTCCTAATTATCATTTCTTGGCATATGGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGATATACTGATGGCTTCCTAATTATCATTTCTTGGCATATGGTTT  1035

seq1  AGACCTCAGGAACCAATACACTTAAACTTCTGTATTCGTTTCATTCTCTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCAGGAACCAATACACTTAAACTTCTGTATTCGTTTCATTCTCTT  1085

seq1  TAAATTACCAGATGACAAAAATGCAACTATGGGAATTAAACTGGACTAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACCAGATGACAAAAATGCAACTATGGGAATTAAACTGGACTAAT  1135

seq1  ATATTACTGCTACTGAATTC  1170
      ||||||||||||||||||||
seq2  ATATTACTGCTACTGAATTC  1155