BAC Information

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BAC

Clone NameB6Ng01-216A04
Chromosome7 (Build37)
Map Location 115,224,340 - 115,432,043
singlet/doubletdoublet
Overlap geneOlfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490
Upstream geneOlfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480
Downstream geneLOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1, Stk33
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216A04.bB6Ng01-216A04.g
ACCGA032815GA032816
length6671,099
definitionB6Ng01-216A04.b B6Ng01-216A04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,431,377 - 115,432,043)(115,224,340 - 115,225,451)
sequence
gaattctcaagatatgagtcagtttgcttttaacagagtgaacacaggta
aacatagtattgcaggttgaatgtttatcctttggtctatataggcaatc
acattatttcatcccactgtatttcagttagaaaatgtcatattaggaaa
gaatttggcaattgtgtaaataagcacatactaatattataggaaatagt
attcacatatttgcaagtgatcagaatggtagtacaaaggacttgataaa
ggatggacctaattagtgtttaaagtatttaataaatttatcattgctcc
tcccatatataatttaagtatgaattatttattatttcttcccagttctt
gcaagaaatattatttgttttcataaaaactggtcttattttaatcaggt
tactggtagtctcggtaataaaaagctgaactgttgcctctcccaaatta
agatatgctcgtcaagagtatacatgagtgggtccatggctcccgctaca
catgtagtagaggtctgccttatctggcatcaatgggaggagaggtgttt
ggtcctatggaggttagttgccccaggaaagatggatgctgtaagggtga
gacccagagtggatgggtggagggagagcatcctcttagaggcaaagagg
aggggtatggagtggtg
gaattcattattttgggactaacagatagtgctacactacgtgctatctt
atttgtgttctttctaccggtttatatagtgactgtagtgggaaatatca
gtataatcctcctaattcggagcagcccacagcttcacacccccatgtac
ttgttcctcagccatctagcctttgtggacattggctactccacatcagt
cacacctataatgctcatcagtttcttaagagaagaaactactatccctc
tcgctggctgtgcagcccagcttggctctgatgtagcttttggaactacc
gagtgcttcctggtggccaccatggcttatgaccgctatgtggccatctg
ctcacccctgctctactccactcaaatgtccccagcaatctgctgcttcc
tgctcggggcatcctatttgggtggatgcatgaatgcttcatcattcaca
ggctgttttgtgaacctaaacttctgtggccccaacaaagtcaaccattt
tttctgtgatctcttcccacttgtgaaactgtcttgtggccatgcttata
ttgctgaaatatctccatccatctcttctgcctccgtccttgtgagcacg
ctctctacgatcattgtgtcttacatttacatcctgcactcaatcctaag
gatgcgctctgctgagggaaggaacaaggctttttccacctgcacgtccc
accttactgcagtcactttgttttacgggacagttctgtttgtgtatgtg
atgcccaagtccagctattcagctgaccaagtcaaagtggcctctgtggt
ctacacagtggtgatccccatgttgaaccctctgatctatagtttgagga
acaggaggtgaaggaggcaatgaaaaaattaatggcgagacacattggtt
cccttgagtaaatcaaaggaaaaaaaaaacaggctataaatcagtatttg
aggaacatggtgcttgatattttcatgttatttaccctaaacattagaat
agagagagctctataaatacagaaatttgactctttcactgggaagcttc
tcttgtgtcaatgcttatattggctggaaaatctacatccatttcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_115431377_115432043
seq2: B6Ng01-216A04.b_45_711 (reverse)

seq1  CACCACTCCATACCCCTCCTCTTTGCCTCTAAGAGGATGCTCTCCCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTCCATACCCCTCCTCTTTGCCTCTAAGAGGATGCTCTCCCTCCA  50

seq1  CCCATCCACTCTGGGTCTCACCCTTACAGCATCCATCTTTCCTGGGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCACTCTGGGTCTCACCCTTACAGCATCCATCTTTCCTGGGGCAA  100

seq1  CTAACCTCCATAGGACCAAACACCTCTCCTCCCATTGATGCCAGATAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTCCATAGGACCAAACACCTCTCCTCCCATTGATGCCAGATAAGG  150

seq1  CAGACCTCTACTACATGTGTAGCGGGAGCCATGGACCCACTCATGTATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTCTACTACATGTGTAGCGGGAGCCATGGACCCACTCATGTATAC  200

seq1  TCTTGACGAGCATATCTTAATTTGGGAGAGGCAACAGTTCAGCTTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACGAGCATATCTTAATTTGGGAGAGGCAACAGTTCAGCTTTTTAT  250

seq1  TACCGAGACTACCAGTAACCTGATTAAAATAAGACCAGTTTTTATGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGAGACTACCAGTAACCTGATTAAAATAAGACCAGTTTTTATGAAAA  300

seq1  CAAATAATATTTCTTGCAAGAACTGGGAAGAAATAATAAATAATTCATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATATTTCTTGCAAGAACTGGGAAGAAATAATAAATAATTCATAC  350

seq1  TTAAATTATATATGGGAGGAGCAATGATAAATTTATTAAATACTTTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATATATGGGAGGAGCAATGATAAATTTATTAAATACTTTAAAC  400

seq1  ACTAATTAGGTCCATCCTTTATCAAGTCCTTTGTACTACCATTCTGATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTAGGTCCATCCTTTATCAAGTCCTTTGTACTACCATTCTGATCA  450

seq1  CTTGCAAATATGTGAATACTATTTCCTATAATATTAGTATGTGCTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAATATGTGAATACTATTTCCTATAATATTAGTATGTGCTTATTT  500

seq1  ACACAATTGCCAAATTCTTTCCTAATATGACATTTTCTAACTGAAATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATTGCCAAATTCTTTCCTAATATGACATTTTCTAACTGAAATACA  550

seq1  GTGGGATGAAATAATGTGATTGCCTATATAGACCAAAGGATAAACATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATGAAATAATGTGATTGCCTATATAGACCAAAGGATAAACATTCA  600

seq1  ACCTGCAATACTATGTTTACCTGTGTTCACTCTGTTAAAAGCAAACTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCAATACTATGTTTACCTGTGTTCACTCTGTTAAAAGCAAACTGAC  650

seq1  TCATATCTTGAGAATTC  667
      |||||||||||||||||
seq2  TCATATCTTGAGAATTC  667

seq1: chr7_115224340_115225451
seq2: B6Ng01-216A04.g_67_1165

seq1  GAATTCATTATTTTGGGACTAACAGATAGTGCTACACTACGTGCTATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATTTTGGGACTAACAGATAGTGCTACACTACGTGCTATCTT  50

seq1  ATTTGTGTTCTTTCTACCGGTTTATATAGTGACTGTAGTGGGAAATATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTCTTTCTACCGGTTTATATAGTGACTGTAGTGGGAAATATCA  100

seq1  GTATAATCCTCCTAATTCGGAGCAGCCCACAGCTTCACACCCCCATGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATCCTCCTAATTCGGAGCAGCCCACAGCTTCACACCCCCATGTAC  150

seq1  TTGTTCCTCAGCCATCTAGCCTTTGTGGACATTGGCTACTCCACATCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTCAGCCATCTAGCCTTTGTGGACATTGGCTACTCCACATCAGT  200

seq1  CACACCTATAATGCTCATCAGTTTCTTAAGAGAAGAAACTACTATCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTATAATGCTCATCAGTTTCTTAAGAGAAGAAACTACTATCCCTC  250

seq1  TCGCTGGCTGTGCAGCCCAGCTTGGCTCTGATGTAGCTTTTGGAACTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGGCTGTGCAGCCCAGCTTGGCTCTGATGTAGCTTTTGGAACTACC  300

seq1  GAGTGCTTCCTGCTGGCCACCATGGCTTATGACCGCTATGTGGCCATCTG  350
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTTCCTGGTGGCCACCATGGCTTATGACCGCTATGTGGCCATCTG  350

seq1  CTCACCCCTGCTCTACTCCACTCAAATGTCCCCAGCAATCTGCTGCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCCTGCTCTACTCCACTCAAATGTCCCCAGCAATCTGCTGCTTCC  400

seq1  TGCTCGGGGCATCCTATTTGGGTGGATGCATGAATGCTTCATCATTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGGGGCATCCTATTTGGGTGGATGCATGAATGCTTCATCATTCACA  450

seq1  GGCTGTTTTGTGAACCTAAACTTCTGTGGCCCCAACAAAGTCAACCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTTTGTGAACCTAAACTTCTGTGGCCCCAACAAAGTCAACCATTT  500

seq1  TTTCTGTGATCTCTTCCCACTTGTGAAACTGTCTTGTGGCCATGCTTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGATCTCTTCCCACTTGTGAAACTGTCTTGTGGCCATGCTTATA  550

seq1  TTGCTGAAATATCTCCATCCATCTCTTCTGCCTCCGTCCTTGTGAGCACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAATATCTCCATCCATCTCTTCTGCCTCCGTCCTTGTGAGCACG  600

seq1  CTCTCTACGATCATTGTGTCTTACATTTACATCCTGCACTCAATCCTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTACGATCATTGTGTCTTACATTTACATCCTGCACTCAATCCTAAG  650

seq1  GATGCGCTCTGCTGAGGGAAGGAACAAGGCTTTTTCCACCTGCACGTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGCTCTGCTGAGGGAAGGAACAAGGCTTTTTCCACCTGCACGTCCC  700

seq1  ACCTTACTGCAGTCACTTTGTTTTACGGGACAGTTCTGTTTGTGTATGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACTGCAGTCACTTTGTTTTACGGGACAGTTCTGTTTGTGTATGTG  750

seq1  ATGCCCAAGTCCAGCTATTCAGCTGACCAAGTCAAAGTGGCCTCTGTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCAAGTCCAGCTATTCAGCTGACCAAGTCAAAGTGGCCTCTGTGGT  800

seq1  CTACACAGTGGTGATCCCCATGTTGAACCCTCTGATCTATAGTTTGAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGTGGTGATCCCCATGTTGAACCCTCTGATCTATAGTTTGAGGA  850

seq1  ACAAGGAGGTGAAGGAGGCAATGAAAAAATTAATGGCGAGAACACATTGG  900
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AC-AGGAGGTGAAGGAGGCAATGAAAAAATTAATGGCGAG-ACACATTGG  898

seq1  TTCCCTTGAAGTAAATCAAAAGGAAAAAAAAAAACAAGGCTAATAAAATC  950
      |||||||| |||||||| |||||||||||||||   ||||||   |||||
seq2  TTCCCTTG-AGTAAATC-AAAGGAAAAAAAAAA--CAGGCTA--TAAATC  942

seq1  AGTAATTTGAGGAACATTGGTGCTTGATATTTTCATGTTATTTACCCTAA  1000
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGT-ATTTGAGGAACA-TGGTGCTTGATATTTTCATGTTATTTACCCTAA  990

seq1  ACATTTAGATAGAGAGAAGCTCCTATAAATACAGAAATTTGACCTCTTTC  1050
      |||||   |||||||| |||| |||||||||||||||||||| |||||| 
seq2  ACATTAGAATAGAGAG-AGCT-CTATAAATACAGAAATTTGA-CTCTTT-  1036

seq1  CACTTGGGAAGC-TCTCTTGTGGTCATGCTTATATT-GCTGAAATATCTA  1098
      ||| |||||||| |||||||||   ||||||||||| |||| || |||||
seq2  CAC-TGGGAAGCTTCTCTTGTGTCAATGCTTATATTGGCTGGAAAATCTA  1085

seq1  CATCCATTTCTTCT  1112
      ||||||||||||||
seq2  CATCCATTTCTTCT  1099