BAC Information

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BAC

Clone NameB6Ng01-216I11
Chromosome7 (Build37)
Map Location 4,214,476 - 4,215,566
singlet/doubletsinglet
Overlap genenone
Upstream geneNlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801
Downstream geneNcr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216I11.bB6Ng01-216I11.g
ACCGA033194GA033195
length9951,088
definitionB6Ng01-216I11.b B6Ng01-216I11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctatgagtcccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggattggtaaagatcctttcccagtctgttggtggcct
ttttgtcttattgacagtgtcttttgctttacagaagctttgaaatttta
tgaggtcccatttgtcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaattttttttcctgtgcccatatcttcgaggttttccccca
ctttctcctctataagttttagtgtctctggttttatgtggagttccttg
atccatttagacttgagcttagtacaaggagataagaacgtatcaattcg
cattcttctacatgataaccgccagttaagccagcaccatttgttgaaaa
tgctgtcttttctccactggatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcacttctattccattg
atctacctgtctgttgctataccagtaccatgcagtttttatcacaattg
ctctgtagtacagctttaggtcaggcatggtgattccaccagaggctctt
ttttcttgagaagagtctttgtgatcctaggttttttgttattccagatg
aatttgcaaattgtcctttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtaaattgcttttggctagatagccattt
ttactatattgatcctggcaatccatgagcttgggagatctttccatctt
ctgagatattctttgatttcttcttcagagacttgtagttcttaccatac
agatctttcacttccttagttagagtcacaccaaggtattttatattatt
tgtgactattgagatggtgttgtttccctaatttctttctcagcc
gaattctgttgtggcgtcttccttgctgatgagtcgggcgtccacacaaa
ccgacaaaacccttaatacagggtagctatacaagagtcacacaaatgta
gggttggcactcaaaatttagacatgttatcctactcaagactgactgat
tcaggtcagaaactcccatacttctcaccataacctttcctgagtaacaa
caggtgccattttcagctgacaaaactctaatgaacacatttcacttcat
gacatactctgcagagtccatctcaccatatgcacagttatcggagagaa
aatggctatctcacctctgagcccaggagtgtgattttggtgtgtgaagg
atgatatgaataaatgaggtcatgtggcaagtttggagaataagcatgac
ccaaggtcctggagagttccatttcaccatcaaatatgatgcctctgcta
tctctgtatatctaatacatcttcattagagaggactgaggatgagctac
gtgtggctttcagtcatctgaaatggattcatcacatggagctcatcaac
cagaaggggacagcatgtattcatatttaaaatgtttcctgttgcttcta
gtcgccatctgcatccggagcttgggctgttccacagccctctgtgcaca
gggcccaccaagagaaagctggtctcccaggagtgctctcactcctaggc
tcagatgtgagaaagccacttttctctccaataactgtccagggctagac
aagcaaggagcatacaggacacaggaacagtgaagtggctgggacaggat
ccttctggtcacaatcttcacccagctcttgagctgttccagggacctct
gtatacaagttcgacaggagatagctggtctcccaaaagtgctttacagg
cataatagggccgaaatgagggacaagatcgagcagagacaagctaagac
ctacttacaccatgagataaacggatggacaaaggcagtacaggaaccat
accaacggaaataaacttacttgccatcatcagacccagttcttgccaca
cgcaagtcctgatacccatactctaaaaagaaatatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4214476_4215566
seq2: B6Ng01-216I11.g_67_1154

seq1  GAATTCTGTTGTGGCGTCTTCCTTGCTGATGAGTCGGGCGTCCACACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGTGGCGTCTTCCTTGCTGATGAGTCGGGCGTCCACACAAA  50

seq1  CCGACAAAACCCTTAATACAGGGTAGCTATACAAGAGTCACACAAATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACAAAACCCTTAATACAGGGTAGCTATACAAGAGTCACACAAATGTA  100

seq1  GGGTTGGCACTCAAAATTTAGACATGTTATCCTACTCAAGACTGACTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGCACTCAAAATTTAGACATGTTATCCTACTCAAGACTGACTGAT  150

seq1  TCAGGTCAGAAACTCCCATACTTCTCACCATAACCTTTCCTGAGTAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCAGAAACTCCCATACTTCTCACCATAACCTTTCCTGAGTAACAA  200

seq1  CAGGTGCCATTTTCAGCTGACAAAACTCTAATGAACACATTTCACTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCCATTTTCAGCTGACAAAACTCTAATGAACACATTTCACTTCAT  250

seq1  GACATACTCTGCAGAGTCCATCTCACCATATGCACAGTTATCGGAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACTCTGCAGAGTCCATCTCACCATATGCACAGTTATCGGAGAGAA  300

seq1  AATGGCTATCTCACCTCTGAGCCCAGGAGTGTGATTTTGGTGTGTGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTATCTCACCTCTGAGCCCAGGAGTGTGATTTTGGTGTGTGAAGG  350

seq1  ATGATATGAATAAATGAGGTCATGTGGCAAGTTTGGAGAATAAGCATGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATGAATAAATGAGGTCATGTGGCAAGTTTGGAGAATAAGCATGAC  400

seq1  CCAAGGTCCTGGAGAGTTCCATTTCACCATCAAATATGATGCCTCTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTCCTGGAGAGTTCCATTTCACCATCAAATATGATGCCTCTGCTA  450

seq1  TCTCTGTATATCTAATACATCTTCATTAGAGAGGACTGAGGATGAGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTATATCTAATACATCTTCATTAGAGAGGACTGAGGATGAGCTAC  500

seq1  GTGTGGCTTTCAGTCATCTGAAATGGATTCATCACATGGAGCTCATCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCTTTCAGTCATCTGAAATGGATTCATCACATGGAGCTCATCAAC  550

seq1  CAGAAGGGGACAGCATGTATTCATATTTAAAATGTTTCCTGTTGCTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGGGACAGCATGTATTCATATTTAAAATGTTTCCTGTTGCTTCTA  600

seq1  GTCGCCATCTGCATCCGGAGCTTGGGCTGTTCCACAGCCCTCTGTGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCCATCTGCATCCGGAGCTTGGGCTGTTCCACAGCCCTCTGTGCACA  650

seq1  GGGCCCACCAAGAGAAAGCTGGTCTCCCAGGAGTGCTCTCACTCCTAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCACCAAGAGAAAGCTGGTCTCCCAGGAGTGCTCTCACTCCTAGGC  700

seq1  TCAGATGTGAGAAAGCCAC-TTTCTCTCCAATAACTGTCCAGGGCTAGAC  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCAGATGTGAGAAAGCCACTTTTCTCTCCAATAACTGTCCAGGGCTAGAC  750

seq1  AAGCAAGGAGCATACAGGACACAGGAACAGTGAAGTGGCTGGGACAGGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGGAGCATACAGGACACAGGAACAGTGAAGTGGCTGGGACAGGAT  800

seq1  CCTTCTGGTCACAATCTTCACCCAGCTCTTGAGCTGTTCCAGGGACCTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGTCACAATCTTCACCCAGCTCTTGAGCTGTTCCAGGGACCTCT  850

seq1  GTATACAAGTTCGACCAGGAGATAGCTGGTCTCCCAAAAGTGC-TTACAG  898
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  GTATACAAGTTCGA-CAGGAGATAGCTGGTCTCCCAAAAGTGCTTTACAG  899

seq1  GCAT-ATA-GGCCGAAATGAGGGACAAGATCGAGCCAGAGAC-AGC-AAG  944
      |||| ||| ||||||||||||||||||||||||| ||||||| ||| |||
seq2  GCATAATAGGGCCGAAATGAGGGACAAGATCGAG-CAGAGACAAGCTAAG  948

seq1  ACCAACTAACACCA-GAGATAAACAGATGGACAAAGGCAAGTACAGGAAC  993
      ||| ||| |||||| ||||||||| ||||||||||||| |||||||||||
seq2  ACCTACTTACACCATGAGATAAACGGATGGACAAAGGC-AGTACAGGAAC  997

seq1  CATACCAACAGAAAATAAAACTACTTGGCATCATCAGAACCCAGTTC-TG  1042
      ||||||||| | |||||||  |||||| ||||||||| ||||||||| ||
seq2  CATACCAAC-GGAAATAAACTTACTTGCCATCATCAG-ACCCAGTTCTTG  1045

seq1  CCACCACAGCAAGTCCTGGATAACCCAACACTCTAAAAAAGAAAAATCT  1091
      ||| ||| ||||||||| ||||  || | ||||| ||||||||| ||||
seq2  CCA-CAC-GCAAGTCCT-GATA--CCCATACTCT-AAAAAGAAATATCT  1088