BAC Information

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BAC

Clone NameB6Ng01-217F07
Chromosome7 (Build37)
Map Location 78,837,679 - 78,838,788
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC665535, Mctp2, LOC100042873, LOC100042880, LOC233391
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217F07.bB6Ng01-217F07.g
ACCGA033772GA033773
length1,109819
definitionB6Ng01-217F07.b B6Ng01-217F07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgggcactattctacctggtgcattttatttccttttgttgtc
catccgtgagagtttaacattttgttcccacattttgagaattgtgaact
agtctgcctgagacatggggtacatatacctcttaagatgcagatttcta
cttcttttgctatgaatgtgatatctgggtatgcagtgttgctacctgta
gttctgcgaggaaaccattcttttccatgataaaattatccttatagcta
tagccttcatagttagttgatgtagagctatagttgacttatttttctaa
gccatgattttttaccttgtaggtacctttttgctttactcggtgctcca
gcaagctgtgcatattgaagacaatattgtgtcatccccatttcattcaa
ggccagagaaactgaaggagcactgctctaccatggagagctccatacgg
atgctcttttctcaaacctactatgttcccttggcaaaagagattactgc
acacctcctataaagttgtttatctatttcatgattgtagtatctcccta
atgattcagttttaaattccagcccactggaaattggccttatgacatgt
atttgtcagtttgactcagcaatttatcggcagtcataactcctttgcct
gacattcactatccagtggatatgaggaagtcaggtaacgaagaaaagtt
cctccaaagtcatgtgatcccaacctttctactctattatattctttaaa
agtttctaaggagacatatttaactcccaaagacatggtcacctgattta
ttatatttggggtaaagaaaggcaatgtttattcaagcaatagtggaatt
aattaagacttgagttgaattttttttcttttctgtattttcattttcta
cctctcccgatcacttgacaagacacaattctgtattgtcctggacattt
tgtaaattctctctttgtgtcgtgtctcatctttcatctcttaagctgtc
ctcctgctcctgcaaaatttcagttcaaatgtctgatgtagtttaagaaa
atatctgctagtgtcgttcttcttgtcgtgttcttctgaaatgtgccctt
ttccacacc

gaattcttagacaaatggatggaactagaaaatatcatcctgagtaaggt
tacccagtcataaaaaaaacacacatgatatgcactcattgataagtgga
tattagcccagaagctcagaatacctaagacacaattcataaaccatata
aaactcaagaagaggaagaccaaagtgtggatacttcggtccttcttaga
agggggaacaaccccccctcaaaaccccaaaacaacaataacaaacaaac
aaacaaacaaaacaaaacaaaaacaaaaacaaaaaagaagggggagcaaa
atacccatggaaggaattacagagaaaaattgtggagtagagactgaagg
aatgaccaaccagagactgctccacctgggaatccatcccatatacagtc
accaaacccagacactattgtggatgccaacaagtgcttgctgacagaaa
cctgatatagctgtctcctgagaggctctaccagtgcctgccaaatacat
tggtggatgcttctagccaaccatcagactgagcacaaggcccctaatgg
aggagctaaagaaaggacccatggagctgaaggggtttgcagcttcatag
gaggaacaagaatatgaactaaccagtacccccagagctcccagggacta
aaccaccaaccaaagaaaacgcatggtgggactcatagctccagctgcat
atgtagcagaggatggccttatcagtcatcaatgggaggtggtcttgtga
aggctctatgccccagtgtaggggaatgccaggaccaggaagctggagtg
ggtgggtaggtgggtaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_78837679_78838788
seq2: B6Ng01-217F07.b_45_1153 (reverse)

seq1  GGTGTGGAAAA-AGCACATCTCAGAAG-ACACGAC-AGAAGAACGACACT  47
      |||||||||||  |||||| ||||||| ||||||| ||||||||||||||
seq2  GGTGTGGAAAAGGGCACATTTCAGAAGAACACGACAAGAAGAACGACACT  50

seq1  AAGCAGATAATTTTCTAAACTACATCAGAACCTTTTGAACTGAAA-TTTG  96
       |||||||| |||  ||||||||||||||  | |||||||||||| ||||
seq2  -AGCAGATATTTTCTTAAACTACATCAGA--CATTTGAACTGAAATTTTG  97

seq1  CAGGAGCAGGAGGACAGCTTAAGAGATGAAAGATGAAGACACGACACAAA  146
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGGAGCAGGAGGACAGCTTAAGAGATGAAAGATG-AGACACGACACAAA  146

seq1  GAGAGAATTTACAAAATGTCCAGGACAAATACAGAATTGTGTCTTGTCAA  196
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGAGAATTTACAAAATGTCCAGGAC-AATACAGAATTGTGTCTTGTCAA  195

seq1  GTGATCGGGAGAGGTAGAAAATGAAAATACAGAAAAGAAAAAAAATTCAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCGGGAGAGGTAGAAAATGAAAATACAGAAAAGAAAAAAAATTCAA  245

seq1  CTCAAGTCTTAATTAATTCCACTATTGCTTGAATAAACATTGCCTTTCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTCTTAATTAATTCCACTATTGCTTGAATAAACATTGCCTTTCTT  295

seq1  TACCCCAAATATAATAAATCAGGTGACCATGTCTTTGGGAGTTAAATATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCAAATATAATAAATCAGGTGACCATGTCTTTGGGAGTTAAATATG  345

seq1  TCTCCTTAGAAACTTTTAAAGAATATAATAGAGTAGAAAGGTTGGGATCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTAGAAACTTTTAAAGAATATAATAGAGTAGAAAGGTTGGGATCA  395

seq1  CATGACTTTGGAGGAACTTTTCTTCGTTACCTGACTTCCTCATATCCACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTTTGGAGGAACTTTTCTTCGTTACCTGACTTCCTCATATCCACT  445

seq1  GGATAGTGAATGTCAGGCAAAGGAGTTATGACTGCCGATAAATTGCTGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTGAATGTCAGGCAAAGGAGTTATGACTGCCGATAAATTGCTGAG  495

seq1  TCAAACTGACAAATACATGTCATAAGGCCAATTTCCAGTGGGCTGGAATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGACAAATACATGTCATAAGGCCAATTTCCAGTGGGCTGGAATT  545

seq1  TAAAACTGAATCATTAGGGAGATACTACAATCATGAAATAGATAAACAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGAATCATTAGGGAGATACTACAATCATGAAATAGATAAACAAC  595

seq1  TTTATAGGAGGTGTGCAGTAATCTCTTTTGCCAAGGGAACATAGTAGGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGGAGGTGTGCAGTAATCTCTTTTGCCAAGGGAACATAGTAGGTT  645

seq1  TGAGAAAAGAGCATCCGTATGGAGCTCTCCATGGTAGAGCAGTGCTCCTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAGAGCATCCGTATGGAGCTCTCCATGGTAGAGCAGTGCTCCTT  695

seq1  CAGTTTCTCTGGCCTTGAATGAAATGGGGATGACACAATATTGTCTTCAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTCTGGCCTTGAATGAAATGGGGATGACACAATATTGTCTTCAA  745

seq1  TATGCACAGCTTGCTGGAGCACCGAGTAAAGCAAAAAGGTACCTACAAGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACAGCTTGCTGGAGCACCGAGTAAAGCAAAAAGGTACCTACAAGG  795

seq1  TAAAAAATCATGGCTTAGAAAAATAAGTCAACTATAGCTCTACATCAACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATCATGGCTTAGAAAAATAAGTCAACTATAGCTCTACATCAACT  845

seq1  AACTATGAAGGCTATAGCTATAAGGATAATTTTATCATGGAAAAGAATGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGAAGGCTATAGCTATAAGGATAATTTTATCATGGAAAAGAATGG  895

seq1  TTTCCTCGCAGAACTACAGGTAGCAACACTGCATACCCAGATATCACATT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCGCAGAACTACAGGTAGCAACACTGCATACCCAGATATCACATT  945

seq1  CATAGCAAAAGAAGTAGAAATCTGCATCTTAAGAGGTATATGTACCCCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAAAAGAAGTAGAAATCTGCATCTTAAGAGGTATATGTACCCCAT  995

seq1  GTCTCAGGCAGACTAGTTCACAATTCTCAAAATGTGGGAACAAAATGTTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGCAGACTAGTTCACAATTCTCAAAATGTGGGAACAAAATGTTA  1045

seq1  AACTCTCACGGATGGACAACAAAAGGAAATAAAATGCACCAGGTAGAATA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCACGGATGGACAACAAAAGGAAATAAAATGCACCAGGTAGAATA  1095

seq1  GTGCCCATGAATTC  1110
      ||||||||||||||
seq2  GTGCCCATGAATTC  1109


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