BAC Information

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BAC

Clone NameB6Ng01-217I21
Chromosome7 (Build37)
Map Location 148,418,557 - 148,582,967
singlet/doubletdoublet
Overlap geneAA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1
Upstream gene5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7
Downstream geneLOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217I21.bB6Ng01-217I21.g
ACCGA033933GA033934
length1,1171,085
definitionB6Ng01-217I21.b B6Ng01-217I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,418,557 - 148,419,675)(148,581,896 - 148,582,967)
sequence
gaattctgtgggtatctcttctgggaaaatgtctaaggacattgtgcaac
ataagccatgggagaatgtagggagactggagctctgagaggatgagcac
ggaggtcttggtagcctccattcattttatgagggccaactgctagtatc
atctaggtgcaaaacagcttagcaggcacttaggggcatgtggcctggac
ctcttttaggacaaagggcattagtcctgtcttgtagctctttctttgct
tattcaaaaagctcattctgtggtattatttcaaaaggcctggcttctgg
gcactagagaaagtttataacttgaaactcatgcagagaataatgcttga
atgacacacttatactctggaaaaccttcatggctgccctggcctatggg
cagtctgtgaaggctctatgtggttggcatggccccacccactatggcta
cctttctcacctgtcttagggtttctgttgatgtgatataacatgaccac
aagcaacttggggaggaaagagtttatttcatcttcctactcatggtcca
tcatctaaggtagaaaggtcaggagctcaaggcaggaagtgatgcaaagg
acatggaggagggacatggaggagtgttgctactttcttaacagcgcccg
ggacaaccatcccagggtggcactgtcagcagtgagctgggcccttccac
gacatcagtaagaaaatgttttacaggcttagccacgaaactgtctggtg
ggagcattttctcagttgaggttctccaaatgaatctagcttgtgttaaa
ttgacctaaaattagccagtatacaaacacagggctcagttggactgagt
tcgggtttccttctggtggcaggctcaatgcacctactttttcctaaatt
tcattatagcctttggctgtcaatgagagtgttctagagaggtaaccctt
gtaatcgggacagtactcatcatacaggagtaggactgactgtgagttat
gtaaccttgtattgataacattgtcagctttccaaagctagttagccttg
aatccctccatagtcaaacctcccatttcttgcaatctaggctggaaagg
tggctcaagagtttgag
gaattcagaaatccgccagcctctgcctaagtgctgggattaaaggcctg
tgccaccactgcctggcaaaattaattttttatgcaaccccaagaaacaa
tactctcaagaaaggagagtgagatgccaaccaaactgatgggaccacag
gttgtttacagtataaaattatcacaacatacctcataaagatgtgtaat
tagcatataaaaaaagactacacatttatgatccatgtgataaggtggaa
gagataaaactataggaacaagaaagattggaggccagcatagtgaccca
caatgttatctgagcacttgggcaggcatggttaaaagtagcctggttac
atagtaatgcctggtgtctcaaacaaacaagaaagaagccaagaacactg
acaaggaggcagaaggaggagtagattgtggtaatggctgtcccaacgca
cactttactcacatccattagacttgttaaaaagtaatggcagctggaca
aggtggtacatccctttaatctcagcactcaggaggaagaggcaggtgga
tctctatgaggcaacctggtctaaataatgttcaggatctccacggctac
acagaaactgtctctgaaacccaagctgaatgaatgaatgaatgaatgag
taaataaacaaaacaaatcaaatcaaaacaaaaacccaaccaaaaacaaa
aagctgaagaaagaaagtaagggcaaccagaaggcaaagggccagaacta
ttgagcctgccagaggctggaacctggaagttcatgaatgttccacacct
cagctggaggtgcccatagcgagaagactcagagccatggagacacagtt
gagactgaggtgtgggatcttctcttgctctccatcagccatactcaccc
acccagcttcttgccgtaggcaatggccctcctctaccaagctctttggt
aggcaggcatcttgggcctgcagccaggatcaagggaatggtttggtggt
ggcatccttggccttgtattcatcgatggcctaggtaagaaaaattcaaa
tagcagaatggaacggtaatcttgtgctgtctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_148418557_148419675
seq2: B6Ng01-217I21.b_47_1163

seq1  GAATTCTGTGGGTATCTCTTCTGGGAAAATGTCTAAGGACATTGTGCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGGTATCTCTTCTGGGAAAATGTCTAAGGACATTGTGCAAC  50

seq1  ATAAGCCATGGGAGAATGTAGGGAGACTGGAGCTCTGAGAGGATGAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCATGGGAGAATGTAGGGAGACTGGAGCTCTGAGAGGATGAGCAC  100

seq1  GGAGGTCTTGGTAGCCTCCATTCATTTTATGAGGGCCAACTGCTAGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCTTGGTAGCCTCCATTCATTTTATGAGGGCCAACTGCTAGTATC  150

seq1  ATCTAGGTGCAAAACAGCTTAGCAGGCACTTAGGGGCATGTGGCCTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGTGCAAAACAGCTTAGCAGGCACTTAGGGGCATGTGGCCTGGAC  200

seq1  CTCTTTTAGGACAAAGGGCATTAGTCCTGTCTTGTAGCTCTTTCTTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTAGGACAAAGGGCATTAGTCCTGTCTTGTAGCTCTTTCTTTGCT  250

seq1  TATTCAAAAAGCTCATTCTGTGGTATTATTTCAAAAGGCCTGGCTTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAAAAGCTCATTCTGTGGTATTATTTCAAAAGGCCTGGCTTCTGG  300

seq1  GCACTAGAGAAAGTTTATAACTTGAAACTCATGCAGAGAATAATGCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGAGAAAGTTTATAACTTGAAACTCATGCAGAGAATAATGCTTGA  350

seq1  ATGACACACTTATACTCTGGAAAACCTTCATGGCTGCCCTGGCCTATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACACTTATACTCTGGAAAACCTTCATGGCTGCCCTGGCCTATGGG  400

seq1  CAGTCTGTGAAGGCTCTATGTGGTTGGCATGGCCCCACCCACTATGGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTGAAGGCTCTATGTGGTTGGCATGGCCCCACCCACTATGGCTA  450

seq1  CCTTTCTCACCTGTCTTAGGGTTTCTGTTGATGTGATATAACATGACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCACCTGTCTTAGGGTTTCTGTTGATGTGATATAACATGACCAC  500

seq1  AAGCAACTTGGGGAGGAAAGAGTTTATTTCATCTTCCTACTCATGGTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTTGGGGAGGAAAGAGTTTATTTCATCTTCCTACTCATGGTCCA  550

seq1  TCATCTAAGGTAGAAAGGTCAGGAGCTCAAGGCAGGAAGTGATGCAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAAGGTAGAAAGGTCAGGAGCTCAAGGCAGGAAGTGATGCAAAGG  600

seq1  ACATGGAGGAGGGACATGGAGGAGTGTTGCTACTTTCTTAACAGCGCCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGGAGGGACATGGAGGAGTGTTGCTACTTTCTTAACAGCGCCCG  650

seq1  GGACAACCATCCCAGGGTGGCACTGTCAGCAGTGAGCTGGGCCCTTCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACCATCCCAGGGTGGCACTGTCAGCAGTGAGCTGGGCCCTTCCAC  700

seq1  GACATCAGTAAGAAAATGTTTTACAGGCTTAGCCACGAAACTGTCTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAGTAAGAAAATGTTTTACAGGCTTAGCCACGAAACTGTCTGGTG  750

seq1  GGAGCATTTTCTCAGTTGAGGTTCTCCAAATGAATCTAGCTTGTGTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATTTTCTCAGTTGAGGTTCTCCAAATGAATCTAGCTTGTGTTAAA  800

seq1  TTGACCTAAAATTAGCCAGTATACAAACACAGGGCTCAGTTGGACTGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTAAAATTAGCCAGTATACAAACACAGGGCTCAGTTGGACTGAGT  850

seq1  TCGGGTTTCCTTCTGGTGGCAGGCTCAATGCACCTACTTTTTCCTAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTTTCCTTCTGGTGGCAGGCTCAATGCACCTACTTTTTCCTAAATT  900

seq1  TCATTATAGCCTTTGGCTGTCAATGAGAGTGTTCTAGAGAGGTAACCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAGCCTTTGGCTGTCAATGAGAGTGTTCTAGAGAGGTAACCCTT  950

seq1  GTAATCGGGACAGTACTCATCATACAGGAGTAGAACTGACTGTGAGTTAT  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTAATCGGGACAGTACTCATCATACAGGAGTAGGACTGACTGTGAGTTAT  1000

seq1  GTAACCTTGTATTGATAACAATTGTCCAGCTTTCCAAAGCTAGTTAGCCT  1050
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  GTAACCTTGTATTGATAAC-ATTGT-CAGCTTTCCAAAGCTAGTTAGCCT  1048

seq1  TGAATTCACTCCATAGTCAAACCTCACATTTCTGGCAATCTAGGCTGGAG  1100
      |||| || ||||||||||||||||| ||||||| ||||||||||||||| 
seq2  TGAA-TCCCTCCATAGTCAAACCTCCCATTTCTTGCAATCTAGGCTGGAA  1097

seq1  AGGTGGCTC-AGAGTTTGAG  1119
      ||||||||| ||||||||||
seq2  AGGTGGCTCAAGAGTTTGAG  1117

seq1: chr7_148581896_148582967
seq2: B6Ng01-217I21.g_67_1151 (reverse)

seq1  AGCAGACA--ACAAGATTAACCGTCCCA-TCTGCT-TTTGAATTTTTCTT  46
      ||||||||  |||||||| ||||| ||| |||||| ||||||||||||||
seq2  AGCAGACAGCACAAGATT-ACCGTTCCATTCTGCTATTTGAATTTTTCTT  49

seq1  ACCTA-GCCATCGATGAATACAAGCCCCAAGATGCCACCACCAACCCAT-  94
      ||||| |||||||||||||||||| || | |||||||||||||| |||| 
seq2  ACCTAGGCCATCGATGAATACAAGGCCAAGGATGCCACCACCAAACCATT  99

seq1  -CCCTGATCCTGGCTGCAG--CCCAGATGCCTGCCTACC-AAGAGC-TGG  139
       || |||||||||||||||  || ||||||||||||||| |||||| |||
seq2  CCCTTGATCCTGGCTGCAGGCCCAAGATGCCTGCCTACCAAAGAGCTTGG  149

seq1  TAGAGGA-GGCCATTGCCTACGGCAAGAAGCTGGGTGGGTGAGTATGGCT  188
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGGGCCATTGCCTACGGCAAGAAGCTGGGTGGGTGAGTATGGCT  199

seq1  GATGGAGAGC-AGAGAAGATCCCACACCTCAGTCTC-ACTGTGTCTCCAT  236
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  GATGGAGAGCAAGAGAAGATCCCACACCTCAGTCTCAACTGTGTCTCCAT  249

seq1  GGCTCTGAGTCTTCTCGCTATGGGCACCTCCAGCTGAGGTGTGGAACATT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGAGTCTTCTCGCTATGGGCACCTCCAGCTGAGGTGTGGAACATT  299

seq1  CATGAACTTCCAGGTTCCAGCCTCTGGCAGGCTCAATAGTTCTGGCCCTT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACTTCCAGGTTCCAGCCTCTGGCAGGCTCAATAGTTCTGGCCCTT  349

seq1  TGCCTTCTGGTTGCCCTTACTTTCTTTCTTCAGCTTTTTGTTTTTGGTTG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTGGTTGCCCTTACTTTCTTTCTTCAGCTTTTTGTTTTTGGTTG  399

seq1  GGTTTTTGTTTTGATTTGATTTGTTTTGTTTATTTACTCATTCATTCATT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGTTTTGATTTGATTTGTTTTGTTTATTTACTCATTCATTCATT  449

seq1  CATTCATTCAGCTTGGGTTTCAGAGACAGTTTCTGTGTAGCCGTGGAGAT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCAGCTTGGGTTTCAGAGACAGTTTCTGTGTAGCCGTGGAGAT  499

seq1  CCTGAACATTATTTAGACCAGGTTGCCTCATAGAGATCCACCTGCCTCTT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACATTATTTAGACCAGGTTGCCTCATAGAGATCCACCTGCCTCTT  549

seq1  CCTCCTGAGTGCTGAGATTAAAGGGATGTACCACCTTGTCCAGCTGCCAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGAGTGCTGAGATTAAAGGGATGTACCACCTTGTCCAGCTGCCAT  599

seq1  TACTTTTTAACAAGTCTAATGGATGTGAGTAAAGTGTGCGTTGGGACAGC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTAACAAGTCTAATGGATGTGAGTAAAGTGTGCGTTGGGACAGC  649

seq1  CATTACCACAATCTACTCCTCCTTCTGCCTCCTTGTCAGTGTTCTTGGCT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCACAATCTACTCCTCCTTCTGCCTCCTTGTCAGTGTTCTTGGCT  699

seq1  TCTTTCTTGTTTGTTTGAGACACCAGGCATTACTATGTAACCAGGCTACT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTGTTTGTTTGAGACACCAGGCATTACTATGTAACCAGGCTACT  749

seq1  TTTAACCATGCCTGCCCAAGTGCTCAGATAACATTGTGGGTCACTATGCT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCATGCCTGCCCAAGTGCTCAGATAACATTGTGGGTCACTATGCT  799

seq1  GGCCTCCAATCTTTCTTGTTCCTATAGTTTTATCTCTTCCACCTTATCAC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCAATCTTTCTTGTTCCTATAGTTTTATCTCTTCCACCTTATCAC  849

seq1  ATGGATCATAAATGTGTAGTCTTTTTTTATATGCTAATTACACATCTTTA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCATAAATGTGTAGTCTTTTTTTATATGCTAATTACACATCTTTA  899

seq1  TGAGGTATGTTGTGATAATTTTATACTGTAAACAACCTGTGGTCCCATCA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATGTTGTGATAATTTTATACTGTAAACAACCTGTGGTCCCATCA  949

seq1  GTTTGGTTGGCATCTCACTCTCCTTTCTTGAGAGTATTGTTTCTTGGGGT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTGGCATCTCACTCTCCTTTCTTGAGAGTATTGTTTCTTGGGGT  999

seq1  TGCATAAAAAATTAATTTTGCCAGGCAGTGGTGGCACAGGCCTTTAATCC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAAAAATTAATTTTGCCAGGCAGTGGTGGCACAGGCCTTTAATCC  1049

seq1  CAGCACTTAGGCAGAGGCTGGCGGATTTCTGAATTC  1072
      ||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTAGGCAGAGGCTGGCGGATTTCTGAATTC  1085