BAC Information

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BAC

Clone NameB6Ng01-218A20
Chromosome7 (Build37)
Map Location 22,368,906 - 22,369,972
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602
Downstream geneLOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218A20.bB6Ng01-218A20.g
ACCGA034284GA034285
length7771,072
definitionB6Ng01-218A20.b B6Ng01-218A20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcgatcttacagtacatgccattgctgttctattcaggaatttt
tcccctgtgcccatatcttcgaggcttttccccactttctcatctataaa
tttcactgtctctagttttatgtggagttccttgatccacttagatttga
cctcagtacaaggatataggagtggatcaattcacattcttctatatgtt
aaccgccaattgtgccagcaccatttgttgaaaatgttgtctttttttcc
actggattgttttagcagtcttgtgaaagatcaagttgaccataggtgtg
tggattcatttctgggtcttcaattctattccactggtctccttgtgtgt
tgctataccagtaccatgcagtttttatcacaattgctctgtagtacagc
tttaggtcaggcatggtgattccaccagaggttcttttatccttgagaag
agttttgctatcctaggttttttgttattccagatgaatttgcagattac
tctttctaattcgttgaagaattgagttggaattttgatggggtcaaagg
ataaaggcaggccctagcacacccagaaccttgggatcactgagaccagt
ctatgtagaagagcatgtgggcagcagaagtaatagagctttctttggac
agggtcccttctgccttcatcctcagccaggagacagagctgagacccag
aaccctggacaccttccctgccagaggagagtctgcctctagggaggcct
ctgatcccaggactcaggaggtggatc
gaattcaattcctgagaccaacacacggaaggagagcactcactcctgga
aattactatctcttacacactgaatagagaaataaaagtttccttaaagt
aaataaatatttgtggaatgcgtgaaatcagagcagcggagaaggtgtag
tcatacttcctagacctgtgttaacttgtgggtcttgaccccttggggag
attgaatgacctatccacaggggtcagatatcaaatatccagcccaccag
atacttacatgatcatgaataacagtagtaaagttgcagctatgaagtag
gaatgaaaatcttgttatggttgggggtcaccatgagaagacagcagcat
cactaaggttgagaacattgatctgatccttaacccaggattcagcgttc
tagaatcacctggcatctgtaagcatcactgaggacccgttcccacctgc
agctgtccgctgacatcagccaagggtttggaatacccttggtgactgcg
actcctctcatcatgcaccacacaggaaaaatgatggtctgctcagtaga
ctcaaaggagaaaaacagaaaagatgtaacatctctctgtactcccaggt
ttttgtactcctaagtctttgtaaactagaaaatgactcaataaaaagag
gtccaaaaagcaaagcaccaaaaacctcatgctgaagaagagatcattta
aaatgatacattttctgttttgtgtactcgtgtgcatgcatgcatgtgag
tgcgtgcatccccatgtctaggtgtggcagtcagagggacagcttaggag
aatcagtgagtccccagagtcagactcagctctcaggctttacagcaatg
ttttctttgggggacaacaatgacaacactggaccagactggacagggca
cagggtggagttctagcttcatgatggaacagttgggtgagatgctcacg
gaaacatgctagtagtggttccacacccagccagccatgctttaaaacaa
attataagttgatataaaaccttgaccattcttcccaatatatgtgataa
atattaaatactctatatttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22368906_22369972
seq2: B6Ng01-218A20.g_63_1134

seq1  GAATTCAATTCCTGAGACCAACACACGGAAGGAGAGCACTCACTCCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCTGAGACCAACACACGGAAGGAGAGCACTCACTCCTGGA  50

seq1  AATTACTATCTCTTACACACTGAATAGAGAAATAAAAGTTTCCTTAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTATCTCTTACACACTGAATAGAGAAATAAAAGTTTCCTTAAAGT  100

seq1  AAATAAATATTTGTGGAATGCGTGAAATCAGAGCAGCGGAGAAGGTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATATTTGTGGAATGCGTGAAATCAGAGCAGCGGAGAAGGTGTAG  150

seq1  TCATACTTCCTAGACCTGTGTTAACTTGTGGGTCTTGACCCCTTGGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTTCCTAGACCTGTGTTAACTTGTGGGTCTTGACCCCTTGGGGAG  200

seq1  ATTGAATGACCTATCCACAGGGGTCAGATATCAAATATCCAGCCCACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGACCTATCCACAGGGGTCAGATATCAAATATCCAGCCCACCAG  250

seq1  ATACTTACATGATCATGAATAACAGTAGTAAAGTTGCAGCTATGAAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTACATGATCATGAATAACAGTAGTAAAGTTGCAGCTATGAAGTAG  300

seq1  GAATGAAAATCTTGTTATGGTTGGGGGTCACCATGAGAAGACAGCAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAATCTTGTTATGGTTGGGGGTCACCATGAGAAGACAGCAGCAT  350

seq1  CACTAAGGTTGAGAACATTGATCTGATCCTTAACCCAGGATTCAGCGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGGTTGAGAACATTGATCTGATCCTTAACCCAGGATTCAGCGTTC  400

seq1  TAGAATCACCTGGCATCTGTAAGCATCACTGAGGACCCGTTCCCACCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCACCTGGCATCTGTAAGCATCACTGAGGACCCGTTCCCACCTGC  450

seq1  AGCTGTCCGCTGACATCAGCCAAGGGTTTGGAATACCCTTGGTGACTGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCGCTGACATCAGCCAAGGGTTTGGAATACCCTTGGTGACTGCG  500

seq1  ACTCCTCTCATCATGCACCACACAGGAAAAATGATGGTCTGCTCAGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCTCATCATGCACCACACAGGAAAAATGATGGTCTGCTCAGTAGA  550

seq1  CTCAAAGGAGAAAAACAGAAAAGATGTAACATCTCTCTGTACTCCCAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGGAGAAAAACAGAAAAGATGTAACATCTCTCTGTACTCCCAGGT  600

seq1  TTTTGTACTCCTAAGTCTTTGTAAACTAGAAAATGACTCAATAAAAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTACTCCTAAGTCTTTGTAAACTAGAAAATGACTCAATAAAAAGAG  650

seq1  GTCC-AAAAGCAAAGCACCAAAAACCTCATGCTGAAGAAGAGATCATTTA  699
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAAAGCAAAGCACCAAAAACCTCATGCTGAAGAAGAGATCATTTA  700

seq1  AAATGATACATTTTCTGTTTTGTGTACTCGTGTGCATGCATGCATGTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATACATTTTCTGTTTTGTGTACTCGTGTGCATGCATGCATGTGAG  750

seq1  TGCGTGCATCCCCATGTCTAGGTGTGGCAGTCAGA-GGACAGCTTAGGAG  798
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGCGTGCATCCCCATGTCTAGGTGTGGCAGTCAGAGGGACAGCTTAGGAG  800

seq1  AATCAGTGAGTCCCCAGAGTCAGACTCAGGCTCTCAGGCTTTACAGCAAT  848
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATCAGTGAGTCCCCAGAGTCAGACTCA-GCTCTCAGGCTTTACAGCAAT  849

seq1  GTTTTCTTTGGGGGACAACAATGACAACACTGGACCAGACTGGACAGGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTGGGGGACAACAATGACAACACTGGACCAGACTGGACAGGGC  899

seq1  ACAGGGTGGAGTTCTAGCTTCATGATGGAGCAGTTGGGTGAGATGCTCAC  948
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACAGGGTGGAGTTCTAGCTTCATGATGGAACAGTTGGGTGAGATGCTCAC  949

seq1  GG-AACATGCTAGTAGT-GTTCCACACCCAGCCAGCCATGCTTTAAAACA  996
      || |||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGAAACATGCTAGTAGTGGTTCCACACCCAGCCAGCCATGCTTTAAAACA  999

seq1  AATTATAAAGTTGATATAAAAACTTGACCA-TCTTCCCATAATATGT-AT  1044
      |||||| |||||||||||||| |||||||| ||||||||  |||||| ||
seq2  AATTAT-AAGTTGATATAAAACCTTGACCATTCTTCCCAATATATGTGAT  1048

seq1  AAATATTAAATA-TCTATATTTAC  1067
      |||||||||||| |||||||||||
seq2  AAATATTAAATACTCTATATTTAC  1072