BAC Information

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BAC

Clone NameB6Ng01-218D05
Chromosome7 (Build37)
Map Location 49,698,842 - 49,700,085
singlet/doubletsinglet
Overlap genenone
Upstream geneEG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60
Downstream gene4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218D05.bB6Ng01-218D05.g
ACCGA034393GA034394
length1,2241,204
definitionB6Ng01-218D05.b B6Ng01-218D05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcttaactgtaatggtgctcactccattacattctctccatcc
ctgggtccaaagctctgcatacacgctgcaccatgtttaaacaggtggtt
atcataaagaattgccaggatcccccacaattctaggggtgatcaaaaaa
tgacaagacttagcccatggaaattttacacatttcctctgtggggaatg
agttccatgtagtctcactgtttactatgtatagggaaccctccatggga
caaacccaggagtcatcaccaaaaacggctcactcagttctcattctgag
cattcttccagggactgtttagaggacactgagtggtatacatgtccctt
ccagggcctagggcctctcatgtgggctctgatgataaaggacccacaca
caccacatcattggccacctaggtatttggctcaggaaaagtttatatat
accaggctagtccctgtctcatcaagaatctagctgtacacttcatctag
cccctgagctgggtgggatttccagtgtctctgaggactggagaccgagg
gctgcaggttggaaacaggcttcctgggtgaacaatggatgcctgtctag
cacagagagttgagaaggaactgtagctagaagtgatagtggcaggtggt
ctagctgtcatcatcacatgagcaaaggtgacctagtccattaccaatgt
gtgtagagaatctcagggaatattattaaagctagcaagcaaatccaaca
acaccacaaaggaacactcctgcatatgaactgagatgaactctccacaa
agctccacagtggccatgcacaggaaggacggaagataagcgtgttgtgc
aggataatcagtaggcacggccatcagcacaggcatagactctgttattg
ccttctctcctgttctccacagtgtttgatgtcctctccagaaatatttt
aaagatgtgtaaacaacgggtaggacataagcagacattatagcatccag
gttaaaaaaaagacaaggaaagttaacacctgcagacagcagggtcacag
attaaagcatgctaccatttcaaatggcagaagaatcagctgcacttcca
cgtatactgtgacagtaggatgcttttggtgagtgtcctgtgcgaatctg
gagacccacaatgccatcagatgaagtgctctcactatggccctgtctga
aaaggtggttaaggacacctgagt
gaattctacgtaactaaggggtcatgtcctattatttggcaatgtacccg
gttcattctgaggttgttccaggaggcccttatcttggaacagtctctag
ggtgaggaggtcaggaatgcattctggggtgaagagttcaggagtgttcc
gggaacaatctctagatgggaggggtcgggctctggggtgaagaagagtt
cagtaattttttatctttattcttcattccctactccttttagaaaatag
ctctaatcttagagcgagttttaacctcttggaggacccgatattgttgc
cttagtaccataacctgtactgcatttatcctttttttaataaaagctac
caacttattaaggatgtaggggccaaaagtaagcaaaagcataagtgtaa
ttaaaggtcctgctatagtagagaggagagtggtgagccaaggggactta
ttaaaccagctttcgaaccatccttgttggctttctctttctcttttatg
tatatctaggcgttctctaagtttggccatagaatctttgattactcttg
aatggtcaacataaaaacaacattctttttttagggcagcacagagtcct
ccttttttaaggaataataagtctaatccccttttattctgtagcaccac
ttcggacagggaagttaaagattcttctaatttggttatagactgttcta
tagttttaagatcaacatctatagctgcacgtagttcttcatagtattgg
ggggtcttaattaaggcagcggttcctgtacttactctagctgctactcc
caatcctaatagaactgccaaagttaaggtaacgggttctcttttccagc
ggacacgatgttcaaatttatctaaaaaagagctatcatcatgatacaag
agtctgggaataagctgaaccaaaatgcagaaatctttggaactattaaa
aacagacatagacacacaggagtgagaccggtattgtagcccacactgtg
tctaggggaggcaccagatactgaccactttgctagactggaatgtctgg
gtctgattacagagtgccctttatccctgaagtactggacagcaaggcct
ctttccttgaacctgctgctagagtcaactttcttgttctccgagacttg
gaaatgatctgaggtaatttatagtcctgaatctctgagacctattcctt
ttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_49698842_49700085
seq2: B6Ng01-218D05.b_44_1267 (reverse)

seq1  ACTCAG--GTCCTTA--CACTTTCTCAG-CAGGCGCCATAGTGAGAGCCA  45
      ||||||  |||||||  ||| || |||| |||| ||||||||||||||  
seq2  ACTCAGGTGTCCTTAACCACCTTTTCAGACAGG-GCCATAGTGAGAGC--  47

seq1  CCTTCCTATCCTGATATGCTATTTGGTGGGTCCTTCAGATCTGCACAGGG  95
       |||| |   |||  |||  |||  |||||| || |||||  ||||| ||
seq2  ACTTCAT---CTG--ATGGCATT--GTGGGT-CTCCAGATTCGCACA-GG  88

seq1  ACACTCA-CAAAAGCATTCCCTACTGTCCACAGTAATTACGTGGAAAGTG  144
      ||||||| |||||||||  |||||||| |||||||  ||||||| |||||
seq2  ACACTCACCAAAAGCAT--CCTACTGT-CACAGTA--TACGTGG-AAGTG  132

seq1  CAGCTGATTCTTTCCTGCCAATTTGAAATGGTAGCATGCTTTAATCTGTG  194
      ||||||||||||  ||||| ||||||||||||||||||||||||||||||
seq2  CAGCTGATTCTT--CTGCC-ATTTGAAATGGTAGCATGCTTTAATCTGTG  179

seq1  ACCCTGCCTTGTCTGCAGGTGTTAACTTTCCTTGTCTTTTTTTTTTAACC  244
      |||||||  |||||||||||||||||||||||||||  ||||||||||||
seq2  ACCCTGC--TGTCTGCAGGTGTTAACTTTCCTTGTC--TTTTTTTTAACC  225

seq1  TGGATGCTATAATGTCTGCTTTATGTCCTACCCGTTGTTTACACATCTTT  294
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGATGCTATAATGTCTGC-TTATGTCCTACCCGTTGTTTACACATCTTT  274

seq1  -AAATATTTCTGGAGAGGACATCAAACACTGTGGAGAACAGGAGAGAAGG  343
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTCTGGAGAGGACATCAAACACTGTGGAGAACAGGAGAGAAGG  324

seq1  CAATAACAGAGTCTATGCCTGTGCTGATGGCCGTGCCTACTGATTATCCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACAGAGTCTATGCCTGTGCTGATGGCCGTGCCTACTGATTATCCT  374

seq1  GCACAACACGCTTATCTTCCGTCCTTCCTGTGCATGGCCACTGTGGAGCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAACACGCTTATCTTCCGTCCTTCCTGTGCATGGCCACTGTGGAGCT  424

seq1  TTGTGGAGAGTTCATCTCAGTTCATATGCAGGAGTGTTTCCTTTGTGGTG  493
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGTGGAGAGTTCATCTCAGTTCATATGCAGGAGTG-TTCCTTTGTGGTG  473

seq1  TTGTTGGATTTGCTTGCTAGCTTTAATAATATTCCCTGAGATTCTCTACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGATTTGCTTGCTAGCTTTAATAATATTCCCTGAGATTCTCTACA  523

seq1  CACATTGGTAATGGACTAGGTCACCTTTGCTCATGTGATGATGACAGCTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGGTAATGGACTAGGTCACCTTTGCTCATGTGATGATGACAGCTA  573

seq1  GACCACCTGCCACTATCACTTCTAGCTACAGTTCCTTCTCAACTCTCTGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCTGCCACTATCACTTCTAGCTACAGTTCCTTCTCAACTCTCTGT  623

seq1  GCTAGACAGGCATCCATTGTTCACCCAGGAAGCCTGTTTCCAACCTGCAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACAGGCATCCATTGTTCACCCAGGAAGCCTGTTTCCAACCTGCAG  673

seq1  CCCTCGGTCTCCAGTCCTCAGAGACACTGGAAATCCCACCCAGCTCAGGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGGTCTCCAGTCCTCAGAGACACTGGAAATCCCACCCAGCTCAGGG  723

seq1  GCTAGATGAAGTGTACAGCTAGATTCTTGATGAGACAGGGACTAGCCTGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGATGAAGTGTACAGCTAGATTCTTGATGAGACAGGGACTAGCCTGG  773

seq1  TATATATAAACTTTTCCTGAGCCAAATACCTAGGTGGCCAATGATGTGGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAAACTTTTCCTGAGCCAAATACCTAGGTGGCCAATGATGTGGT  823

seq1  GTGTGTGGGTCCTTTATCATCAGAGCCCACATGAGAGGCCCTAGGCCCTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGGGTCCTTTATCATCAGAGCCCACATGAGAGGCCCTAGGCCCTG  873

seq1  GAAGGGACATGTATACCACTCAGTGTCCTCTAAACAGTCCCTGGAAGAAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACATGTATACCACTCAGTGTCCTCTAAACAGTCCCTGGAAGAAT  923

seq1  GCTCAGAATGAGAACTGAGTGAGCCGTTTTTGGTGATGACTCCTGGGTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAATGAGAACTGAGTGAGCCGTTTTTGGTGATGACTCCTGGGTTT  973

seq1  GTCCCATGGAGGGTTCCCTATACATAGTAAACAGTGAGACTACATGGAAC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATGGAGGGTTCCCTATACATAGTAAACAGTGAGACTACATGGAAC  1023

seq1  TCATTCCCCACAGAGGAAATGTGTAAAATTTCCATGGGCTAAGTCTTGTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCCCACAGAGGAAATGTGTAAAATTTCCATGGGCTAAGTCTTGTC  1073

seq1  ATTTTTTGATCACCCCTAGAATTGTGGGGGATCCTGGCAATTCTTTATGA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGATCACCCCTAGAATTGTGGGGGATCCTGGCAATTCTTTATGA  1123

seq1  TAACCACCTGTTTAAACATGGTGCAGCGTGTATGCAGAGCTTTGGACCCA  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACCTGTTTAAACATGGTGCAGCGTGTATGCAGAGCTTTGGACCCA  1173

seq1  GGGATGGAGAGAATGTAATGGAGTGAGCACCATTACAGTTAAGCTGAATT  1243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGAGAGAATGTAATGGAGTGAGCACCATTACAGTTAAGCTGAATT  1223

seq1  C  1244
      |
seq2  C  1224