BAC Information

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BAC

Clone NameB6Ng01-218H24
Chromosome7 (Build37)
Map Location 107,134,616 - 107,298,281
singlet/doubletdoublet
Overlap geneChrdl2, Pold3
Upstream geneUvrag, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602
Downstream gene2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218H24.bB6Ng01-218H24.g
ACCGA034612GA034613
length681467
definitionB6Ng01-218H24.b B6Ng01-218H24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,134,616 - 107,135,296)(107,297,809 - 107,298,281)
sequence
gaattcagccacaagaaggaaggctggggatgatgacacagggcagcttc
aggtacaaggcttgatgcatcctatgttatgaaatcaatttcatggaata
acatccaatagttaataccgttaccattcagtgagtttcaaaatacaaca
cataaaaaaaaatctattacgaagaaagcacaagaggaacactcctccat
tgcaagctggtacaaccactctggaaatcagtcttgcggttcctcagaaa
actggaaatagtactaactgaggacccagctattccactcctgggcattt
acccagaagatgctccagcacataacaaggacacatgttcctctatattc
atagcagccttatttatagtagccagaagctggaaacacccagatgtccc
tcagcaaaggaatggatacagaaaatgtgatacatttacataatggagta
ctactcagctattaaaaacaatgacttcgtgaaattcactggcaaatgga
tggaactagaaaataccatcctgagtgaggtaaaatcatcccactcacaa
aagaacacacacagtatgcactcactgataagtggatattaggcaaaaag
ctcagaatacccacaatacaattcacagaccacatgaagctcaaaaagaa
ggaagagcaaagtgtgggtgcttcaatccta
agcatagtgacacaatattggcttattcaaacatcagcagaaaaattaca
tgtacgagcagggtgtcagagttctgtgagttgttgactcagttcagata
gccctgttatgtcttcacattccctttatcttatggtcaagctgttccca
ggaatgttttaactacgaggcatacccaggtttgtttttctcttttctca
gccccaggcagcctctaggctcacaaacaaccagcaatttctgagtactt
tatatgacttacagttcttgaaatttcatctttctttcaaaatgaggact
tggcaaatgaacagattcagtccctcatctctgccttcatggaacttgca
gtctagggtacagaggagatactggggtgggggtggggcctgaggagggg
cagccaggaagtggaaggaataatcctgcctacaatttgcggggggctgg
gatagataggggttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107134616_107135296
seq2: B6Ng01-218H24.b_49_729

seq1  GAATTCAGCCACAAGAAGGAAGGCTGGGGATGATGACACAGGGCAGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCACAAGAAGGAAGGCTGGGGATGATGACACAGGGCAGCTTC  50

seq1  AGGTACAAGGCTTGATGCATCCTATGTTATGAAATCAATTTCATGGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAAGGCTTGATGCATCCTATGTTATGAAATCAATTTCATGGAATA  100

seq1  ACATCCAATAGTTAATACCGTTACCATTCAGTGAGTTTCAAAATACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAATAGTTAATACCGTTACCATTCAGTGAGTTTCAAAATACAACA  150

seq1  CATAAAAAAAAATCTATTACGAAGAAAGCACAAGAGGAACACTCCTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAAAAAATCTATTACGAAGAAAGCACAAGAGGAACACTCCTCCAT  200

seq1  TGCAAGCTGGTACAACCACTCTGGAAATCAGTCTTGCGGTTCCTCAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCTGGTACAACCACTCTGGAAATCAGTCTTGCGGTTCCTCAGAAA  250

seq1  ACTGGAAATAGTACTAACTGAGGACCCAGCTATTCCACTCCTGGGCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAATAGTACTAACTGAGGACCCAGCTATTCCACTCCTGGGCATTT  300

seq1  ACCCAGAAGATGCTCCAGCACATAACAAGGACACATGTTCCTCTATATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAGATGCTCCAGCACATAACAAGGACACATGTTCCTCTATATTC  350

seq1  ATAGCAGCCTTATTTATAGTAGCCAGAAGCTGGAAACACCCAGATGTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGCCTTATTTATAGTAGCCAGAAGCTGGAAACACCCAGATGTCCC  400

seq1  TCAGCAAAGGAATGGATACAGAAAATGTGATACATTTACATAATGGAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAAGGAATGGATACAGAAAATGTGATACATTTACATAATGGAGTA  450

seq1  CTACTCAGCTATTAAAAACAATGACTTCGTGAAATTCACTGGCAAATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGCTATTAAAAACAATGACTTCGTGAAATTCACTGGCAAATGGA  500

seq1  TGGAACTAGAAAATACCATCCTGAGTGAGGTAAAATCATCCCACTCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTAGAAAATACCATCCTGAGTGAGGTAAAATCATCCCACTCACAA  550

seq1  AAGAACACACACAGTATGCACTCACTGATAAGTGGATATTAGGCAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACACACAGTATGCACTCACTGATAAGTGGATATTAGGCAAAAAG  600

seq1  CTCAGAATACCCACAATACAATTCACAGACCACATGAAGCTCAAAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATACCCACAATACAATTCACAGACCACATGAAGCTCAAAAAGAA  650

seq1  GGAAGAGCAAAGTGTGGGTGCTTCAATCCTA  681
      |||||||||||||||||||||||||||||||
seq2  GGAAGAGCAAAGTGTGGGTGCTTCAATCCTA  681

seq1: chr7_107297809_107298281
seq2: B6Ng01-218H24.g_64_536 (reverse)

seq1  CACAACCCCTATCTATCCCAGCCCCCCGCAAATTGTAGGCAGGATTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCCCTATCTATCCCAGCCCCCCGCAAATTGTAGGCAGGATTATTC  50

seq1  CTTCCACTTCCTGGCTGCCCCTCCTCAGGCCCCACCCCCACCCCAGTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACTTCCTGGCTGCCCCTCCTCAGGCCCCACCCCCACCCCAGTATC  100

seq1  TCCTCTGTACCCTAGACTGCAAGTTCCATGAAGGCAGAGATGAGGGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTACCCTAGACTGCAAGTTCCATGAAGGCAGAGATGAGGGACTG  150

seq1  AATCTGTTCATTTGCCAAGTCCTCATTTTGAAAGAAAGATGAAATTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTCATTTGCCAAGTCCTCATTTTGAAAGAAAGATGAAATTTCAA  200

seq1  GAACTGTAAGTCATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTAAGTCATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCC  250

seq1  TAGAGGCTGCCTGGGGCTGAGAAAAGAGAAAAACAAACCTGGGTATGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCTGCCTGGGGCTGAGAAAAGAGAAAAACAAACCTGGGTATGCCT  300

seq1  CGTAGTTAAAACATTCCTGGGAACAGCTTGACCATAAGATAAAGGGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTTAAAACATTCCTGGGAACAGCTTGACCATAAGATAAAGGGAATG  350

seq1  TGAAGACATAACAGGGCTATCTGAACTGAGTCAACAACTCACAGAACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACATAACAGGGCTATCTGAACTGAGTCAACAACTCACAGAACTCT  400

seq1  GACACCCTGCTCGTACATGTAATTTTTCTGCTGATGTTTGAATAAGCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCTGCTCGTACATGTAATTTTTCTGCTGATGTTTGAATAAGCCAA  450

seq1  TATTGTGTCACTATGCTGAATTC  473
      |||||||||||||||||||||||
seq2  TATTGTGTCACTATGCTGAATTC  473