BAC Information

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BAC

Clone NameB6Ng01-218I09
Chromosome7 (Build37)
Map Location 141,222,220 - 141,388,611
singlet/doubletdoublet
Overlap geneAdam12
Upstream geneCtbp2, LOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1
Downstream geneA130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699, LOC668750, Dock1, B830028B13Rik, EG668693
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218I09.bB6Ng01-218I09.g
ACCGA034628GA034629
length98931
definitionB6Ng01-218I09.b B6Ng01-218I09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,388,514 - 141,388,611)(141,222,220 - 141,223,152)
sequence
ttgcattttaggggacataatcaactctgtcaagatataatgtatttaca
gttgtcatacttgggttcagggtaaagagattttacatttgtgtgtgt
gaattctttccatctatgcagtcaccatctgcctatgtttaacagagagc
ctgactgttcatgatgctgtggaagatggtcctgttcatcatgtatcttg
taaagtgtctctgggacccagggagaaaggatagaatgaaaaagatcatc
ctaagtggccccaaggcattttgcacctgtgtggaagcaccctgtctctc
cattcaggagatccagcaaacagtgactttctaggatagcctaagctctc
tatattgcttctcctctgcctcacgtaactttgactttctctctaaaatc
tccacagcaaaatgcagaggccatagtgggaaagagatggcagggaaggc
tgagaatgggctgtgaatcagaaagaagggagtccagtggaatcttcttc
tttaggtccaagcagacccagtgcctcaccgctcactgcctctgagcagg
agagatgaggccgacccctcaaactactcagagcagtctcgctcagaagt
gtggggaactgggaggaaggaggcccagccaggggaggcaagaccacctc
aggggcgtagtcctacaagaatggaacaaaacaatagcctcccagtgatc
cacagccaaggcaaacagaaaagagcacacacagaaggaggtggacttgc
agcggagaggagagctgtgttaggggagatgctgacagcactcagaagcc
caagggccacacagccaggtgcagagagctttggatcccctaatctgggg
cctgtcttctcccagggcaactctgcaaaatattattattatttagttgc
aacaacaataatgactcagaaaacaaaaaccaaaacaggccaagtattgg
aacacagaagagctttctaaggggttttattttaacatatgttttctaag
agagcagggagcactgccagggagcccagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_141388514_141388611
seq2: B6Ng01-218I09.b_55_152 (reverse)

seq1  ACACACACAAATGTAAAATCTCTTTACCCTGAACCCAAGTATGACAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAAATGTAAAATCTCTTTACCCTGAACCCAAGTATGACAACTG  50

seq1  TAAATACATTATATCTTGACAGAGTTGATTATGTCCCCTAAAATGCAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACATTATATCTTGACAGAGTTGATTATGTCCCCTAAAATGCAA  98

seq1: chr7_141222220_141223152
seq2: B6Ng01-218I09.g_64_994

seq1  GAATTCTTTCCATCTATGCAGTCACCATCTGCCTATGTTTAACAGAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCATCTATGCAGTCACCATCTGCCTATGTTTAACAGAGAGC  50

seq1  CTGACTGTTCATGATGCTGTGGAAGATGGTCCTGTTCATCATGTATCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGTTCATGATGCTGTGGAAGATGGTCCTGTTCATCATGTATCTTG  100

seq1  TAAAGTGTCTCTGGGACCCAGGGAGAAAGGATAGAATGAAAAAGATCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGTCTCTGGGACCCAGGGAGAAAGGATAGAATGAAAAAGATCATC  150

seq1  CTAAGTGGCCCCAAGGCATTTTGCACCTGTGTGGAAGCACCCTGTCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGCCCCAAGGCATTTTGCACCTGTGTGGAAGCACCCTGTCTCTC  200

seq1  CATTCAGGAGATCCAGCAAACAGTGACTTTCTAGGATAGCCTAAGCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGGAGATCCAGCAAACAGTGACTTTCTAGGATAGCCTAAGCTCTC  250

seq1  TATATTGCTTCTCCTCTGCCTCACGTAACTTTGACTTTCTCTCTAAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGCTTCTCCTCTGCCTCACGTAACTTTGACTTTCTCTCTAAAATC  300

seq1  TCCACAGCAAAATGCAGAGGCCATAGTGGGAAAGAGATGGCAGGGAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGCAAAATGCAGAGGCCATAGTGGGAAAGAGATGGCAGGGAAGGC  350

seq1  TGAGAATGGGCTGTGAATCAGAAAGAAGGGAGTCCAGTGGAATCTTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGGGCTGTGAATCAGAAAGAAGGGAGTCCAGTGGAATCTTCTTC  400

seq1  TTTAGGTCCAAGCAGACCCAGTGCCTCACCGCTCACTGCCTCTGAGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTCCAAGCAGACCCAGTGCCTCACCGCTCACTGCCTCTGAGCAGG  450

seq1  AGAGATGAGGCCGACCCCTCAAACTACTCAGAGCAGTCTCGCTCAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGAGGCCGACCCCTCAAACTACTCAGAGCAGTCTCGCTCAGAAGT  500

seq1  GTGGGGAACTGGGAGGAAGGAGGCCCAGCCAGGGGAGGCAAGACCACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAACTGGGAGGAAGGAGGCCCAGCCAGGGGAGGCAAGACCACCTC  550

seq1  AGGGGCGTAGTCCTACAAGAATGGAACAAAACAATAGCCTCCCAGTGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCGTAGTCCTACAAGAATGGAACAAAACAATAGCCTCCCAGTGATC  600

seq1  CACAGCCAAGGCAAACAGAAAAGAGCACACACAGAAGGAGGTGGACTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCAAGGCAAACAGAAAAGAGCACACACAGAAGGAGGTGGACTTGC  650

seq1  AGCGGAGAGGAGAGCTGTGTTAGGGGAGATGCTGACAGCACTCAGAAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGAGAGGAGAGCTGTGTTAGGGGAGATGCTGACAGCACTCAGAAGCC  700

seq1  CAAGGGCCACACAGCCAGGTGCAGAGAGCTTTGGATCCCCTAATCTGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCCACACAGCCAGGTGCAGAGAGCTTTGGATCCCCTAATCTGGGG  750

seq1  CCTGTCTTCTCCCAGGGCAACTCTGCAAAATATTATTATTATTTAGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTCTCCCAGGGCAACTCTGCAAAATATTATTATTATTTAGTTGC  800

seq1  AACAACAATAATGACTCAGAAAACAAAAACCAAAACAGGCCAAGTATTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAATAATGACTCAGAAAACAAAAACCAAAACAGGCCAAGTATTGG  850

seq1  AACACCAGAAAGAGCTTTCTAAGGGGTTTTATTTTAAACATATGTTTTCT  900
      |||| ||| |||||||||||||||||||||||||| ||||||||||||||
seq2  AACA-CAG-AAGAGCTTTCTAAGGGGTTTTATTTT-AACATATGTTTTCT  897

seq1  AAGAGAGCAGGGAGCACTGCCA-GGAGCCCAGTG  933
      |||||||||||||||||||||| |||||||||||
seq2  AAGAGAGCAGGGAGCACTGCCAGGGAGCCCAGTG  931