BAC Information

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BAC

Clone NameB6Ng01-218L18
Chromosome7 (Build37)
Map Location 106,540,361 - 106,733,753
singlet/doubletdoublet
Overlap geneGdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1
Upstream geneLOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1
Downstream geneEG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218L18.bB6Ng01-218L18.g
ACCGA034784GA034785
length1,062781
definitionB6Ng01-218L18.b B6Ng01-218L18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,732,691 - 106,733,753)(106,540,361 - 106,541,136)
sequence
gaattcattgggtcggggctggtgagatggctcagtgggtaagagcaccc
aactgctcttccgaaggtcaggagttcaaatcccagcaaccacatggtgg
ctcacaaccacccataacaagatctgactccctcttctggagtgtatgaa
gacagctacagtgtacttacatataatcaataaataaatctttaaaaaaa
aaaagaattcattgggtcctcaggtcctgcagggaatctggcatggataa
ggaccctccagtgccaatgtgtgtactggagatctagttctcttctcctc
tcagctgtccacagcctctgctgtactcgggttatgttcaacactggccc
acagagaactctcagaaacctctgcctgaaaccgaacacaggtgaaccca
gggcccagggcctcggaaaagtcagttctggagaagatgtaaatagtggg
acatcagaaggcctacaagcaaggctggagaggtcaactaggtggttctg
ttccaggtcctaaaggaaggggcctggatcttcagcttgtagccctgtca
acacccgtaggctcagggcccgaggcttctgcttatattcacaaagctct
tttctctatgagctgaaatctgctgctatgctttgccttctggactctgg
cacagcaagggtccctcagcccaaggacggtgcacaagagcacagcatca
tctctgagacgatttctgaggccagtttcttcaccaggcctcagtttgaa
tcactgtgacacccacctccctttttcatggtcatctttttttaaaaaat
aacaatctgggctcagtgcttccatttgtaaatcggatgactctgagcct
ccccatacaacaagaaaagagcctgtgagaccaacgactttctacagaag
cagctgttgtgagcatgggcaatttactcccacggagtcatttagcacat
tgtcctactgtggtggtggtagggtagtcttgtatctaatgggcagggac
cagggacgctggcaaacattcttgcatgtccaggcagacgtatggctacc
aactggagaata
gaattccccacagtctgagaggaacatttgtgagagaggtgacgagggta
agttctggaagccgacctgcccaggactccaccttgactcccatctcctg
gtggatcccagattcgtcatctgaggaagaggcagtcttcactcacacac
ccagctggagaccttgtgcgggctgagggagcgagggagaggatgtttgt
cctgcgcctggtgcagtttttgtggtttttaccgaggacggcctcacttt
acagacgaaagggtggagagtcaaagaaaggtgatcgaccgcctgaggcc
acgcagtggtgtggtttcgtcctccaggcttccagtctgtggggacttgt
ttatttttcctacaaaaccttgcttttaccctcaagtgacctgctgcctc
ctttactcagaaccttctctgtgtggcgcagctgcttgctgtggcctctt
gtctagagtgccaaacagcacttgcctggaacatagtaggcacttccaaa
atgtcctgtgcatgccaagtggtgggtgtgcatgaagatgtcttctggag
ggtgaaggcccgagccatgctcagaagtttcctctgcctcttacacctgt
gaaaccatttgtgtcgctttatatggaaccttcaggaaagagcatgaagc
ctgggatagggaaatggtttgcttccctgtgcaaagtgggctggtcatct
tgtaaggatgggctgtacagaagttgccccccttttctcagtgccccgct
tctatgactgtacctgctcagctctacgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106732691_106733753
seq2: B6Ng01-218L18.b_45_1106 (reverse)

seq1  TATTCT-CAGTTGGTAG-CATACGTCTGCCTGGACATTGCAGGATGTTTG  48
      |||||| |||||||||| |||||||||||||||||||   || |||||||
seq2  TATTCTCCAGTTGGTAGCCATACGTCTGCCTGGACATGCAAGAATGTTTG  50

seq1  CCAGCGTCCCTGGTCCCTGCCCATTAGATACAAGAACTACCCCTACCACC  98
      |||||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  CCAGCGTCCCTGGTCCCTGCCCATTAGATACAAG-ACTA-CCCTACCACC  98

seq1  ACCACAGTTAGGACAATGTGCTAAATGACTCCGTGGGAGTAAATTGCCCA  148
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAG-TAGGACAATGTGCTAAATGACTCCGTGGGAGTAAATTGCCCA  147

seq1  TGCTCACAACAGCTGCTTCTGTAGAAAGTCGTTGGTCTCACAGGCTCTTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACAACAGCTGCTTCTGTAGAAAGTCGTTGGTCTCACAGGCTCTTT  197

seq1  TCTTGTTGTATGGGGAGGCTCAGAGTCATCCGATTTACAAATGGAAGCAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTGTATGGGGAGGCTCAGAGTCATCCGATTTACAAATGGAAGCAC  247

seq1  TGAGCCCAGATTGTTATTTTTTAAAAAAAGATGACCATGAAAAAGGGAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCAGATTGTTATTTTTTAAAAAAAGATGACCATGAAAAAGGGAGG  297

seq1  TGGGTGTCACAGTGATTCAAACTGAGGCCTGGTGAAGAAACTGGCCTCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTCACAGTGATTCAAACTGAGGCCTGGTGAAGAAACTGGCCTCAG  347

seq1  AAATCGTCTCAGAGATGATGCTGTGCTCTTGTGCACCGTCCTTGGGCTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGTCTCAGAGATGATGCTGTGCTCTTGTGCACCGTCCTTGGGCTGA  397

seq1  GGGACCCTTGCTGTGCCAGAGTCCAGAAGGCAAAGCATAGCAGCAGATTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCTTGCTGTGCCAGAGTCCAGAAGGCAAAGCATAGCAGCAGATTT  447

seq1  CAGCTCATAGAGAAAAGAGCTTTGTGAATATAAGCAGAAGCCTCGGGCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCATAGAGAAAAGAGCTTTGTGAATATAAGCAGAAGCCTCGGGCCC  497

seq1  TGAGCCTACGGGTGTTGACAGGGCTACAAGCTGAAGATCCAGGCCCCTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTACGGGTGTTGACAGGGCTACAAGCTGAAGATCCAGGCCCCTTC  547

seq1  CTTTAGGACCTGGAACAGAACCACCTAGTTGACCTCTCCAGCCTTGCTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGACCTGGAACAGAACCACCTAGTTGACCTCTCCAGCCTTGCTTG  597

seq1  TAGGCCTTCTGATGTCCCACTATTTACATCTTCTCCAGAACTGACTTTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTTCTGATGTCCCACTATTTACATCTTCTCCAGAACTGACTTTTC  647

seq1  CGAGGCCCTGGGCCCTGGGTTCACCTGTGTTCGGTTTCAGGCAGAGGTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCCCTGGGCCCTGGGTTCACCTGTGTTCGGTTTCAGGCAGAGGTTT  697

seq1  CTGAGAGTTCTCTGTGGGCCAGTGTTGAACATAACCCGAGTACAGCAGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTTCTCTGTGGGCCAGTGTTGAACATAACCCGAGTACAGCAGAG  747

seq1  GCTGTGGACAGCTGAGAGGAGAAGAGAACTAGATCTCCAGTACACACATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGACAGCTGAGAGGAGAAGAGAACTAGATCTCCAGTACACACATT  797

seq1  GGCACTGGAGGGTCCTTATCCATGCCAGATTCCCTGCAGGACCTGAGGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGGAGGGTCCTTATCCATGCCAGATTCCCTGCAGGACCTGAGGAC  847

seq1  CCAATGAATTCTTTTTTTTTTTAAAGATTTATTTATTGATTATATGTAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAATTCTTTTTTTTTTTAAAGATTTATTTATTGATTATATGTAAG  897

seq1  TACACTGTAGCTGTCTTCATACACTCCAGAAGAGGGAGTCAGATCTTGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGTAGCTGTCTTCATACACTCCAGAAGAGGGAGTCAGATCTTGTT  947

seq1  ATGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACC  997

seq1  TTCGGAAGAGCAGTTGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGAAGAGCAGTTGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCC  1047

seq1  CGACCCAATGAATTC  1063
      |||||||||||||||
seq2  CGACCCAATGAATTC  1062

seq1: chr7_106540361_106541136
seq2: B6Ng01-218L18.g_66_846

seq1  GAATTCCCCACAGTCTGAGAGGAACATTTGTGAGAGAGGTGACGAGGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCACAGTCTGAGAGGAACATTTGTGAGAGAGGTGACGAGGGTA  50

seq1  AGTTCTGGAAGCCGACCTGCCCAGGACTCCACCTTGACTCCCATCTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGAAGCCGACCTGCCCAGGACTCCACCTTGACTCCCATCTCCTG  100

seq1  GTGGATCCCAGATTCGTCATCTGAGGAAGAGGCAGTCTTCACTCACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCCCAGATTCGTCATCTGAGGAAGAGGCAGTCTTCACTCACACAC  150

seq1  CCAGCTGGAGACCTTGTGCGGGCTGAGGGAGCGAGGGAGAGGATGTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGAGACCTTGTGCGGGCTGAGGGAGCGAGGGAGAGGATGTTTGT  200

seq1  CCTGCGCCTGGTGCAGTTTTTGTGGTTTTTACCGAGGACGGCCTCACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGCCTGGTGCAGTTTTTGTGGTTTTTACCGAGGACGGCCTCACTTT  250

seq1  ACAGACGAAAGGGTGGAGAGTCAAAGAAAGGTGATCGACCGCCTGAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACGAAAGGGTGGAGAGTCAAAGAAAGGTGATCGACCGCCTGAGGCC  300

seq1  ACGCAGTGGTGTGGTTTCGTCCTCCAGGCTTCCAGTCTGTGGGGACTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGTGGTGTGGTTTCGTCCTCCAGGCTTCCAGTCTGTGGGGACTTGT  350

seq1  TTATTTTTCCTACAAAACCTTGCTTTTACCCTCAAGTGACCTGCTGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTCCTACAAAACCTTGCTTTTACCCTCAAGTGACCTGCTGCCTC  400

seq1  CTTTACTCAGAACCTTCTCTGTGTGGCGCAGCTGCTTGCTGTGGCCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTCAGAACCTTCTCTGTGTGGCGCAGCTGCTTGCTGTGGCCTCTT  450

seq1  GTCTAGAGTGCCAAACAGCACTTGCCTGGAACATAGTAGGCACTTCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAGTGCCAAACAGCACTTGCCTGGAACATAGTAGGCACTTCCAAA  500

seq1  ATGTCCTGTGCATGCCAAGTGGTGGGTGTGCATGAAGATGTCTTCTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTGTGCATGCCAAGTGGTGGGTGTGCATGAAGATGTCTTCTGGAG  550

seq1  GGTGAAGGCCCGAGCCATGCTCAGAAGTTTCCTCTGCCTCTTACACCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGGCCCGAGCCATGCTCAGAAGTTTCCTCTGCCTCTTACACCTGT  600

seq1  GAAACCATTTGTGTCGC-TTATATGGAACCTTCAGGAAAGAGCATGAAGC  649
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAACCATTTGTGTCGCTTTATATGGAACCTTCAGGAAAGAGCATGAAGC  650

seq1  CTGGGATAGGGAAATGGTTTGCTT-CCTGTGCAAAGTGGGCTGGTCATCT  698
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGGGATAGGGAAATGGTTTGCTTCCCTGTGCAAAGTGGGCTGGTCATCT  700

seq1  TGTAAGGATGGGCTGTACAGAAGTTGCCCCC--TTTCCAAGTG-CCCGCT  745
      |||||||||||||||||||||||||||||||  ||||  |||| ||||||
seq2  TGTAAGGATGGGCTGTACAGAAGTTGCCCCCCTTTTCTCAGTGCCCCGCT  750

seq1  CCTATGACTGTACCTGCTCAGCTCTACGTTT  776
       ||||||||||||||||||||||||||||||
seq2  TCTATGACTGTACCTGCTCAGCTCTACGTTT  781