BAC Information

Click to search

BAC

Clone NameB6Ng01-218P14
Chromosome7 (Build37)
Map Location 51,023,806 - 51,216,273
singlet/doubletdoublet
Overlap geneKlk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8
Upstream geneLOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13
Downstream geneKlk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62, Il4i1, Tbc1d17, Akt1s1, Pnkp, Ptov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218P14.bB6Ng01-218P14.g
ACCGA034951GA034952
length307326
definitionB6Ng01-218P14.b B6Ng01-218P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,023,806 - 51,024,112)(51,215,948 - 51,216,273)
sequence
aattctaattaaattcccaaaggacccaggtcaggagcccacattgtaca
tccctaaccacagggctgggagtcgctcatgggctctgttcttctacccc
tgggctctctgcttcagttcctcactgagccttcatacactgcatccagc
ttctttcctctgcccctccctgctcagagtgtcctagggccccaccctcc
cagctcattcctccctagagtggggattagaatccaggtccacagacacc
ttgagtcattgtcccctgggcccatcccctgggccattgggggtggggtt
gggggta
ttctcccatttaaatcctccaaccacctgagactggacaagaggtgcagc
ctctgcaacaggggcaatgggggaggggagacttggctcatttagggagg
tgcacttttgggggacagagttaagcagggatgggatcaggggatatggg
cacgggttctgaagaagtgatccaatatggctggtcttggatagggagat
gaatgctgtgggtacagaaataactctagaatcaggaatcaggtatagtg
tcaggccaccttatagttttttttactatgggatagaagggcaatgagag
agaaagagaggggggagatggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51023806_51024112
seq2: B6Ng01-218P14.b_53_359

seq1  AATTCTAATTAAATTCCCAAAGGACCCAGGTCAGGAGCCCACATTGTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAATTAAATTCCCAAAGGACCCAGGTCAGGAGCCCACATTGTACA  50

seq1  TCCCTAACCACAGGGCTGGGAGTCGCTCATGGGCTCTGTTCTTCTACCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAACCACAGGGCTGGGAGTCGCTCATGGGCTCTGTTCTTCTACCCC  100

seq1  TGGGCTCTCTGCTTCAGTTCCTCACTGAGCCTTCATACACTGCATCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCTCTGCTTCAGTTCCTCACTGAGCCTTCATACACTGCATCCAGC  150

seq1  TTCTTTCCTCTGCCCCTCCCTGCTCAGAGTGTCCTAGGGCCCCACCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCTCTGCCCCTCCCTGCTCAGAGTGTCCTAGGGCCCCACCCTCC  200

seq1  CAGCTCATTCCTCCCTAGAGTGGGGATTAGAATCCAGGTCCACAGACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCATTCCTCCCTAGAGTGGGGATTAGAATCCAGGTCCACAGACACC  250

seq1  TTGAGTCATTGTCCCCTGGGCCCATCCCCTGGGCCATTGGGGGTGGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCATTGTCCCCTGGGCCCATCCCCTGGGCCATTGGGGGTGGGGTT  300

seq1  GGGGGTA  307
      |||||||
seq2  GGGGGTA  307

seq1: chr7_51215948_51216273
seq2: B6Ng01-218P14.g_72_397 (reverse)

seq1  CCTCTCCATCTCCCCCCTCTCTTTCTCTCTCATTGCCCTTCTATCCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCATCTCCCCCCTCTCTTTCTCTCTCATTGCCCTTCTATCCCATA  50

seq1  GTAAAAAAAACTATAAGGTGGCCTGACACTATACCTGATTCCTGATTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAAAACTATAAGGTGGCCTGACACTATACCTGATTCCTGATTCTA  100

seq1  GAGTTATTTCTGTACCCACAGCATTCATCTCCCTATCCAAGACCAGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATTTCTGTACCCACAGCATTCATCTCCCTATCCAAGACCAGCCAT  150

seq1  ATTGGATCACTTCTTCAGAACCCGTGCCCATATCCCCTGATCCCATCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATCACTTCTTCAGAACCCGTGCCCATATCCCCTGATCCCATCCCT  200

seq1  GCTTAACTCTGTCCCCCAAAAGTGCACCTCCCTAAATGAGCCAAGTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAACTCTGTCCCCCAAAAGTGCACCTCCCTAAATGAGCCAAGTCTCC  250

seq1  CCTCCCCCATTGCCCCTGTTGCAGAGGCTGCACCTCTTGTCCAGTCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCATTGCCCCTGTTGCAGAGGCTGCACCTCTTGTCCAGTCTCAG  300

seq1  GTGGTTGGAGGATTTAAATGGGAGAA  326
      ||||||||||||||||||||||||||
seq2  GTGGTTGGAGGATTTAAATGGGAGAA  326