BAC Information

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BAC

Clone NameB6Ng01-219C23
Chromosome7 (Build37)
Map Location 88,440,807 - 88,441,886
singlet/doubletsinglet
Overlap genePde8a
Upstream genePrc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, EG636544
Downstream geneRps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219C23.bB6Ng01-219C23.g
ACCGA035104GA035105
length1,2681,089
definitionB6Ng01-219C23.b B6Ng01-219C23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagggccaacttcactgctgtatccagaaaacagttatagtta
aacctttgcctcttaaaaactctgtctctcttgcacaaggatccttgagt
gataggaaggagtgtgtggtatagaggtcgtgtttaaggttgagcagtct
tcagtctcttttctctatactgctcagttgacagtctctatgttaatcac
catatactgcacagaaaagcttctctgataaaggtgaacagatgcgtaat
ctgagggtgtaatgacagatcattagcgcttattctgtgtccatttagca
ggatgacagtagtagtttctcccctgtggtctgtgacctgtccaaccaca
ggttcttggactctacaacagtgttgagcatgggcttcaacttgtggagt
ggaacttcaattcaatcagaaagtgattgtttacttccatgacgtttgta
acacagatgcactagtgagcatggcttgtcaggctggtcgttgttgtagc
tcacatgattcacatctttttaattctgtaagattggcgattggttttta
actctggtaacagcatagaagcttccagcactatgaaagccagccagtag
agatgaagcttacaggtaagtacctgcttgatttctctgtgttctgtgac
tcaagtatgtggtgttttactgccgagttctgaaggataattcaagagca
ttagcaagagcctaaagaggtagcccatttctggcattagagttttgtta
ctctgtggtatatagtaggaccattgactttcaagaatgttaagaaaaag
tcattgatcacaacagtctcgattgactgtgaaatcatttgtttgaaaga
acataatgaggacaaatgactcagtgtcctatctttgttactctgagtac
tgaaatttgtgaatgaagtagagatttattaaaaagagcacaactgtggt
tgctgtactgtctagaaagaacaaaggaggtcagatttttgttcttcctg
gttgcagtatttataataatgaaaaatacaaacaattccatttaacattc
tgctactccacacaccattagctatataggttacatggttccctttacca
acattgattcaacaacataacaagaattcttaaatagttgtgggggtgag
attcccattccagtaatctgggatattacatttttatcaaccctgacccc
ttaatttgttttagatatcacacggccctcctccctctttacaaagtggc
aagatgacgaagaactcg
gaattcagagccccatatccacatgaaaagctggggtgcctgtaatcccc
gctctgaagatacagaggatccttggagttcaggttcagggagactctga
ctcaaaaataaggtggggagcaattgaggaagacaaccagatgttgactt
ctggcctctacacatacgtcatcgtcgtcgtcgttgccgttattgttgtt
gttttgttctgtttcgtttaagatgtaatagaagactttctggaatccat
ctcaatgtctgatgagtgactcccatttaaacttgagacctcagagcagt
agtaaatgagaaaaaagtaagatacaaaaccacacacctggattttcagt
tttctgtgctaaagggaaaatactttgtaccatacccaatagagtgccat
ttttctctgacaactgatatgttttcctactctacattatcaatattgtc
attaattctctttttgtttgttgagacaggctctcatgtagcatagtgta
gcctggaacttgctgtgtagccaaggttgaccttgaacttgaacttggaa
tcctcatgtcttagcctcctgagtgcttggatcataggccttcgccacca
tgtgcagctgagacttttttttttttttaataagaaacaagtagaagcct
agatatttgtagatcaagtaagaaaaagtttttaaatgctcctaggttta
aagaataaaaccagccattctccttattctgtatctcttctgtgtccaac
tatttagcattctttttaaattggggatcaaagagagaagccattgctct
gtatctgtatgcctaaggcagataaaaagctatcgaaattggaatgttac
aatttgtaggaaacactacaaggcccccctatgcagaaaaagacatgtgc
ttcttagaatgaaatgatttactaagaaatcagtgtagaaaccgtccact
aagcagaaatgtttaaaggcctgggtgagaaaagtcatgtgactctcagc
ttagcgcccacagtagcaccggccagttagttcggttgtttgtgacctcc
catttaactggtatgagtcctattctggagtagggtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88440807_88441886
seq2: B6Ng01-219C23.g_63_1151

seq1  GAATTCAGAGCCCCATATCCACATGAAAAGCTGGGGTGCCTGTAATCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCCCCATATCCACATGAAAAGCTGGGGTGCCTGTAATCCCC  50

seq1  GCTCTGAAGATACAGAGGATCCTTGGAGTTCAGGTTCAGGGAGACTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAAGATACAGAGGATCCTTGGAGTTCAGGTTCAGGGAGACTCTGA  100

seq1  CTCAAAAATAAGGTGGGGAGCAATTGAGGAAGACAACCAGATGTTGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAATAAGGTGGGGAGCAATTGAGGAAGACAACCAGATGTTGACTT  150

seq1  CTGGCCTCTACACATACGTCATCGTCGTCGTCGTTGCCGTTATTGTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTACACATACGTCATCGTCGTCGTCGTTGCCGTTATTGTTGTT  200

seq1  GTTTTGTTCTGTTTCGTTTAAGATGTAATAGAAGACTTTCTGGAATCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTCTGTTTCGTTTAAGATGTAATAGAAGACTTTCTGGAATCCAT  250

seq1  CTCAATGTCTGATGAGTGACTCCCATTTAAACTTGAGACCTCAGAGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGTCTGATGAGTGACTCCCATTTAAACTTGAGACCTCAGAGCAGT  300

seq1  AGTAAATGAGAAAAAAGTAAGATACAAAACCACACACCTGGATTTTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGAGAAAAAAGTAAGATACAAAACCACACACCTGGATTTTCAGT  350

seq1  TTTCTGTGCTAAAGGGAAAATACTTTGTACCATACCCAATAGAGTGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGCTAAAGGGAAAATACTTTGTACCATACCCAATAGAGTGCCAT  400

seq1  TTTTCTCTGACAACTGATATGTTTTCCTACTCTACATTATCAATATTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGACAACTGATATGTTTTCCTACTCTACATTATCAATATTGTC  450

seq1  ATTAATTCTCTTTTTGTTTGTTGAGACAGGCTCTCATGTAGCATAGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCTCTTTTTGTTTGTTGAGACAGGCTCTCATGTAGCATAGTGTA  500

seq1  GCCTGGAACTTGCTGTGTAGCCAAGGTTGACCTTGAACTTGAACTTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGAACTTGCTGTGTAGCCAAGGTTGACCTTGAACTTGAACTTGGAA  550

seq1  TCCTCATGTCTTAGCCTCCTGAGTGCTTGGATCATAGGCCTTCGCCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGTCTTAGCCTCCTGAGTGCTTGGATCATAGGCCTTCGCCACCA  600

seq1  TGTGCAGCTGAGACTTTTTTTTTTTTTTAATAAGAAACAAGTAGAAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGCTGAGACTTTTTTTTTTTTTTAATAAGAAACAAGTAGAAGCCT  650

seq1  AGATATTTGTAGATCAAGTAAGAAAAAGTTTTTAAATGCTCCTAGGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTGTAGATCAAGTAAGAAAAAGTTTTTAAATGCTCCTAGGTTTA  700

seq1  AAGAATAAAACCAGCCATTCTCCTTATTCTGTATCTCTTCTGTGTCCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAAACCAGCCATTCTCCTTATTCTGTATCTCTTCTGTGTCCAAC  750

seq1  TATTTAGCATTCTTTTTAAATTGGGGATCAAAGAGAGAAGCCATTGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGCATTCTTTTTAAATTGGGGATCAAAGAGAGAAGCCATTGCTCT  800

seq1  GTATCTGTATGCCTAAGGCAGATAAAAAGCTATCGAAATTGGAATGTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGTATGCCTAAGGCAGATAAAAAGCTATCGAAATTGGAATGTTAC  850

seq1  AATTTGTAGGAAACACTACAAGG-CCCCCTATGCAG-AAAAGACATGTGC  898
      ||||||||||||||||||||||| |||||||||||| |||||||||||||
seq2  AATTTGTAGGAAACACTACAAGGCCCCCCTATGCAGAAAAAGACATGTGC  900

seq1  TTCTTAGAATGAAATGATTTACTA--GAATCAGTGTAGAAA-CGT-CACT  944
      ||||||||||||||||||||||||   |||||||||||||| ||| ||||
seq2  TTCTTAGAATGAAATGATTTACTAAGAAATCAGTGTAGAAACCGTCCACT  950

seq1  AAGCAGAAATGTTTAAAGG-CTGGGTGAGAAAAGTCATGTGACTCTCAGC  993
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGCAGAAATGTTTAAAGGCCTGGGTGAGAAAAGTCATGTGACTCTCAGC  1000

seq1  TAAGCGCCCACAGTAGGCACCGGGCAGTTAGTTCGTTTGTTTGTGA-CTC  1042
      | ||||||||||||| ||||||| ||||||||||| |||||||||| |||
seq2  TTAGCGCCCACAGTA-GCACCGGCCAGTTAGTTCGGTTGTTTGTGACCTC  1049

seq1  CCATTT-ACTTGTATGAGT-CTATTCTGAGTTAGGGTCTC  1080
      |||||| ||| |||||||| ||||||||   |||||||||
seq2  CCATTTAACTGGTATGAGTCCTATTCTGGAGTAGGGTCTC  1089