BAC Information

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BAC

Clone NameB6Ng01-219F05
Chromosome7 (Build37)
Map Location 76,519,994 - 76,521,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041800, EG384639, Arrdc4, LOC384741
Downstream geneEG665410, Nr2f2, LOC100042833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219F05.bB6Ng01-219F05.g
ACCGA035196GA035197
length1,2181,204
definitionB6Ng01-219F05.b B6Ng01-219F05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtatcacacagattgggttctttctcatactgttagtgacaa
aatagtgactaaagaaaccttatgaacaacagctatccaccaagtaaact
agaaaatgaatagaatttgaaaaaaacatagtaaaattaaaaccaaatga
aataatgataattttcagcagttattgcataatgtgaaactttcagaatg
gaaagtgtctacattattgtcaataaagtataaccatgtatgacattcct
tgtgatttcttcaagttctggtagctatgattgctttagcctttcaaata
cttgtttatgcagggtatatagatgttaatatcattcaaagaatgacaag
aagtgagtatagtaaaaactactctattagtctttggataaatacattca
aaatatgttttatatttgggtcaaggctaatatgaaatatttatgcatat
tttttccaataaaatcacatgctgagccatcactttctccattttttaca
acaaagacactaaggttcaaaaaatctacattatttgtcactcttattct
gctcatcagtatcccagctccaggggaagtaactttgcaatagaaagctg
atgggtacccaggactgtcctctgtcacaggagtcctcactgtccaaaag
gatcaaatgtacagaacaggatggaggtagtgctgaagagtggtaaggga
aatggacacaagatgaaaattttctccctttacttgcatttggggagctt
gcctttgcattgttcctaaggacattagtcactgctttggtaggtgatct
gtttcccatactggtggtatctgttttaagaaagtccaaatacaaggtta
gaaccttccttttaccacccatcttactccatataaataaaagagactaa
ttattcttgtttcaggtttagttttcattcaaggagatgctggacatgga
gatcccatattttctataattaacctagtagatacacatcacagacttac
cttgattgaactgggtacactgcacaagttgaattcatactaaatgcatc
ctgccctcttctcatccagagtcttctgcattacaattgaacctatgatg
acagcatgaaaggacccaaaagaattctgccaatgtctgtagatcacctc
tgaacacatatgcctatgaagaaatcttctgccatgcatctatatgtgta
ggagaggccaaatatttt

gaattccccacacataccaggctattgcaaagactatattggttgctctc
aacaactggaaggtaatggcctatggctaaagataccacatacttatgcc
agcaaaacgaagtgaagctgctgcccaaatagcagcttcagcactactaa
cgagcattcatagtaagggactatgcattctactagaggagaaaggtaat
caaccatatgatacatctaaaaatgtggtgatctacagaagtggcctgct
tacaagatatactggggcaatagtggcacaaatgggatggaaataaatgg
ctaatattggattgaattaaaggccctcttcatgagatgaaatatttctc
ttcatactagacacatctaaagtagtcaaaaacatgaaataggagaggtc
atgagcttagggaacaaaaccaagactattattattctactggaacaaag
aaagaaggtgactccaaatgatataccactgtatcaatagaattgtactt
tggcagccaaagatacataatgagactcttgtcttaaatgaaacaaaaca
aaataaaacacgaaaacaacaacaacaacaaatatatattatggagcact
tgggaggcagaggcaggtgaactactcaggtcaaggccagcctggtctac
agagtgggttccaggacagccagggctacacagagaaaccccgtctcaaa
aaaaaccgaaaaccaaaaccaaaacaaaccaaacaaaaaatgtttgttct
cccctatccaaaacaacactaatggttaaaatttgaatgacaccctaaga
caatatgctaccacattctttctgtattcagcaatgtcatggtaagtata
gtacatagcaactataagatagaatgaaaaaaattgttcaagttataaag
gaagaaataaacttcaattgaccctacatatcggtgaattccatatttta
ccttgcaagtaacattttagtcgtagagaataaaaaaaaaatctagtttg
aatatgtatagactgttgcatctttattatggtgtggttattgcttgata
agaagcccagagagtagacactttcttctatcatgattgatacaatattt
ttcttgcaggaaatatagagaactcagaaaaaaagtatagatatgaaccg
cataatgataccaatataagccaaactacgtgtttctctggggaatatat
acta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76519994_76521206
seq2: B6Ng01-219F05.b_44_1261

seq1  GAATTCTTGTATCACACAGATTGGGTTCTTTCTCATACTGTTAGTGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTATCACACAGATTGGGTTCTTTCTCATACTGTTAGTGACAA  50

seq1  AATAGTGACTAAAGAAACCTTATGAACAACAGCTATCCACCAAGTAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGACTAAAGAAACCTTATGAACAACAGCTATCCACCAAGTAAACT  100

seq1  AGAAAATGAATAGAATTTGAAAAAAACATAGTAAAATTAAAACCAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGAATAGAATTTGAAAAAAACATAGTAAAATTAAAACCAAATGA  150

seq1  AATAATGATAATTTTCAGCAGTTATTGCATAATGTGAAACTTTCAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGATAATTTTCAGCAGTTATTGCATAATGTGAAACTTTCAGAATG  200

seq1  GAAAGTGTCTACATTATTGTCAATAAAGTATAACCATGTATGACATTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTCTACATTATTGTCAATAAAGTATAACCATGTATGACATTCCT  250

seq1  TGTGATTTCTTCAAGTTCTGGTAGCTATGATTGCTTTAGCCTTTCAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTCTTCAAGTTCTGGTAGCTATGATTGCTTTAGCCTTTCAAATA  300

seq1  CTTGTTTATGCAGGGTATATAGATGTTAATATCATTCAAAGAATGACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTATGCAGGGTATATAGATGTTAATATCATTCAAAGAATGACAAG  350

seq1  AAGTGAGTATAGTAAAAACTACTCTATTAGTCTTTGGATAAATACATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGTATAGTAAAAACTACTCTATTAGTCTTTGGATAAATACATTCA  400

seq1  AAATATGTTTTATATTTGGGTCAAGGCTAATATGAAATATTTATGCATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTTTTATATTTGGGTCAAGGCTAATATGAAATATTTATGCATAT  450

seq1  TTTTTCCAATAAAATCACATGCTGAGCCATCACTTTCTCCATTTTTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAATAAAATCACATGCTGAGCCATCACTTTCTCCATTTTTTACA  500

seq1  ACAAAGACACTAAGGTTCAAAAAATCTACATTATTTGTCACTCTTATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGACACTAAGGTTCAAAAAATCTACATTATTTGTCACTCTTATTCT  550

seq1  GCTCATCAGTATCCCAGCTCCAGGGGAAGTAACTTTGCAATAGAAAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCAGTATCCCAGCTCCAGGGGAAGTAACTTTGCAATAGAAAGCTG  600

seq1  ATGGGTACCCAGGACTGTCCTCTGTCACAGGAGTCCTCACTGTCCAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTACCCAGGACTGTCCTCTGTCACAGGAGTCCTCACTGTCCAAAAG  650

seq1  GATCAAATGTACAGAACAGGATGGAGGTAGTGCTGAAGAGTGGTAAGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAATGTACAGAACAGGATGGAGGTAGTGCTGAAGAGTGGTAAGGGA  700

seq1  AATGGACACAAGATGAAAATTTTCTCCCTTTACTTGCATTTGGGGAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACACAAGATGAAAATTTTCTCCCTTTACTTGCATTTGGGGAGCTT  750

seq1  GCCTTTGCATTGTTCCTAAGGACATTAGTCACTGCTTTGGTAGGTGATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGCATTGTTCCTAAGGACATTAGTCACTGCTTTGGTAGGTGATCT  800

seq1  GTTTCCCATACTGGTGGTATCTGTTTTAAGAAAGTCCAAATACAAGGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCATACTGGTGGTATCTGTTTTAAGAAAGTCCAAATACAAGGTTA  850

seq1  GAACCTTCCTTTTACCACCCATCTTACTCCATATAAATAAAAGAGACTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTCCTTTTACCACCCATCTTACTCCATATAAATAAAAGAGACTAA  900

seq1  TTATTCTTGTTTCAGGGTTTAGTTTTCATTCAAGGAGATGCTGGACATGG  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTATTCTTGTTTCA-GGTTTAGTTTTCATTCAAGGAGATGCTGGACATGG  949

seq1  AGATCCCATATTTTCTATAATTAACCTAGGTAGATACACATCACAGACTT  1000
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGATCCCATATTTTCTATAATTAACCTA-GTAGATACACATCACAGACTT  998

seq1  ACCTTGATTGAACTGGGTACACTGCACAAGTTGGAATTCATACTAAATGC  1050
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACCTTGATTGAACTGGGTACACTGCACAAGTT-GAATTCATACTAAATGC  1047

seq1  ATCCTGCCCTCTTCTCATCCAGAGTC-TCTGCATTACAATTGAACCTATG  1099
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATCCTGCCCTCTTCTCATCCAGAGTCTTCTGCATTACAATTGAACCTATG  1097

seq1  ATGACAGCATGAAAGGGCCCAAAAGATTTCTGCCATGGCCTGTAGATCAC  1149
      |||||||||||||||| ||||||||| ||||||||  | |||||||||||
seq2  ATGACAGCATGAAAGGACCCAAAAGAATTCTGCCAATGTCTGTAGATCAC  1147

seq1  CTCTG-ACAC-TATGGCTATGAAG--ATCTTCTGGCATGCATCTATGTGT  1195
      ||||| |||| |||| ||||||||  |||||||| ||||||||||| |||
seq2  CTCTGAACACATATGCCTATGAAGAAATCTTCTGCCATGCATCTATATGT  1197

seq1  -AAGGAGAGGC--AATATTTT  1213
        |||||||||  ||||||||
seq2  GTAGGAGAGGCCAAATATTTT  1218


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