BAC Information

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BAC

Clone NameB6Ng01-219L07
Chromosome7 (Build37)
Map Location 84,497,054 - 84,498,246
singlet/doubletsinglet
Overlap genenone
Upstream geneEG244071
Downstream geneA330068G13Rik, Ntrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219L07.bB6Ng01-219L07.g
ACCGA035466GA035467
length1,2181,181
definitionB6Ng01-219L07.b B6Ng01-219L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatcctttctcagcatctaaggagatgatcatgtgaattttgtcttt
gggtttgtttataaaatgttcagcatccttaatcaacagggaaatgcaaa
tcaaaacaaccctgagattccacctcacaccattcagaatggctaagatc
aaaaattcaggtgaaagcagatgctggcgaggatgtggagaaagagaaat
actccttcattgttggtgggattgcaagcttgtacaaccaatctggaaat
cagtctgtcggttcctcaaaaaattagacatagtactactggaggatccc
acaatacctctcctgggtatatatccagaatatgttccaacaggtaagaa
ggacacatgctccactatgttcatagccaccttatttataatagtcagaa
gctggaaagaacccagatgcccctcaacagaggaactgatacagaaaatg
tggtacatttacacaatggagtactactcagctattaaaaagaatgaatt
tatgaaattcttaggcaaatggatggacctggtagacatcatcctgagtg
aggtaactcaatcacaaaagaactcatgtgatatttactcactgatacat
ggatattagcccagaaacttagaatacacaagatataagataaaatttgc
aaaacacatgaagctcgggaagaacaaagataaaggtgtggatactttac
tcgttcttggaattgggagcaaggcacccatggaaggagctacagagaca
gagtttggagctgagatgaatggatggaccatctagagactgccataccc
gggatccatcccataatcagcttctaaatgctgacaccattgtatatact
agcaaggtttgctgaaaggaccctgatatagctgtctcttgtgagactat
gccggggccctagcaaacactgaagtggatgttcacagtcagttatggat
ggatcacagggccctcaatgcaggagccagaggagtaccaaggagcctgg
gggggatctgcaaccctatagtgacaccaatatgaactacagtactcttc
cagagctcgtgtcctctagcctgcatatgtatccagaaaatggcccttgt
ctgcatcatgtaagagaggcatggtcattgcgaaaccttcattatggctc
tccagtatcacagtggga
gaattcatatccagtttcaccaggattcaaatgatgagtggttttaaaat
tgataggtcaaattttattgaaagacaatagatatgtatgtctcagaggt
taaaagcatgtaatgtttattcagaggaccgacttcagtttctagcaccc
atgttgggatgctcacaaatgcctgtaactccagcgccatgggacctgag
tccctctagtgtgctcaccttcactcatgttgtgtacactcaggaagaca
aagatacacagtttaaaaataattaaatcttttcttttaagaaaatattt
attcattaacaaacataataaaaaaattactaagtttggcccaaagctgc
aaatatttggcacaaagaaagaagtgactattttcaattttccacattgt
atagttttccatgttttttttttttatgtctgctcatttttacataatca
gatttcaacaagagaaacaaatgtttttttatgtcacaatcaaagtgtat
gatgaatagacaccaagataactgccccgtgacaacacatacacaaacat
ccccaggcttccatgagccatctagaatgtttgtgacaccagacaaagaa
acttaaatggatgtgactcaccctttattccttatgaattgatgatgata
ttcatcttttataactattttatagtttatagctttaaggataatgttta
caaaattataacaaaaatatacctgatggccaatagaaaatatagttatg
gacaggagaagataaaacctttatgatattacctccatggtatcacgttt
tataaattaggaagacatgtctaggtttatttttttcacttatgctaata
aatacatgggcatatataaaaggcccatgtttatttgaccataatgagat
tagggaattttcaaaagtgtaaatgtaatttcttgtttttattcatttta
tgtatgtatttatgcaggctgaaataatctagccatgggaaaattccact
ttcacatagcatctaggaataaaccacaaaatgaaacagacacgcaaatg
tatataccaggagaaaacactactagctggaagggagcttgtgaggagaa
gaaccgaaagacgtagtgagcatgtgagatgaactgtgcctagcagcgag
atactcaaggcaagcgagaaagacctatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84497054_84498246
seq2: B6Ng01-219L07.g_67_1247

seq1  GAATTCATATCCAGTTTCACCAAGATTCAAATGATGAGTGGTTTTAAAAT  50
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAATTCATATCCAGTTTCACCAGGATTCAAATGATGAGTGGTTTTAAAAT  50

seq1  TGATAGGTCAAATTTTATTGAAAGACAATAGATATGTATGTCTCAGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGTCAAATTTTATTGAAAGACAATAGATATGTATGTCTCAGAGGT  100

seq1  TAAAAGCATGTAATGTTTATTCAGAGGACCGACTTCAGTTTCTAGCACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCATGTAATGTTTATTCAGAGGACCGACTTCAGTTTCTAGCACCC  150

seq1  ATGTTGGGATGCTCACAAATGCCTGTAACTCCAGCGCCATGGGACCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGGATGCTCACAAATGCCTGTAACTCCAGCGCCATGGGACCTGAG  200

seq1  TCCCTCTAGTGTGCTCACCTTCACTCATGTTGTGTACACTCAGGAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTAGTGTGCTCACCTTCACTCATGTTGTGTACACTCAGGAAGACA  250

seq1  AAGATACACAGTTTAAAAATAATTAAATCTTTTCTTTTAAGAAAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACACAGTTTAAAAATAATTAAATCTTTTCTTTTAAGAAAATATTT  300

seq1  ATTCATTAACAAACATAATAAAAAAATTACTAAGTTTGGCCCAAAGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAACAAACATAATAAAAAAATTACTAAGTTTGGCCCAAAGCTGC  350

seq1  AAATATTTGGCACAAAGAAAGAAGTGACTATTTTCAATTTTCCACATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTGGCACAAAGAAAGAAGTGACTATTTTCAATTTTCCACATTGT  400

seq1  ATAGTTTTCCATGTTTTTTTTTTTTATGTCTGCTCATTTTTACATAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTCCATGTTTTTTTTTTTTATGTCTGCTCATTTTTACATAATCA  450

seq1  GATTTCAACAAGAGAAACAAATGTTTTTTTATGTCACAATCAAAGTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAACAAGAGAAACAAATGTTTTTTTATGTCACAATCAAAGTGTAT  500

seq1  GATGAATAGACACCAAGATAACTGCCCCGTGACAACACATACACAAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATAGACACCAAGATAACTGCCCCGTGACAACACATACACAAACAT  550

seq1  CCCCAGGCTTCCATGAGCCATCTAGAATGTTTGTGACACCAGACAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGCTTCCATGAGCCATCTAGAATGTTTGTGACACCAGACAAAGAA  600

seq1  ACTTAAATGGATGTGACTCACCCTTTATTCCTTATGAATTGATGATGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATGGATGTGACTCACCCTTTATTCCTTATGAATTGATGATGATA  650

seq1  TTCATCTTTTATAACTATTTTATAGTTTATAGCTTTAAGGATAATGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTTTATAACTATTTTATAGTTTATAGCTTTAAGGATAATGTTTA  700

seq1  CAAAATTATAACAAAAATATACCTGATGGCCAATAGAAAATATAGTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTATAACAAAAATATACCTGATGGCCAATAGAAAATATAGTTATG  750

seq1  GACAGGAGAAGATAAAACCTTTATGATATTACCTCCATGGTATCACGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAGAAGATAAAACCTTTATGATATTACCTCCATGGTATCACGTTT  800

seq1  TATAAATTAGGAAGACATGTCTAGGTTTATTTTTTTCACTTATGCTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTAGGAAGACATGTCTAGGTTTATTTTTTTCACTTATGCTAATA  850

seq1  AATACATGGGCATATATAAAAGGCCCATGTTTATTTGACCATAATGAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGGGCATATATAAAAGGCCCATGTTTATTTGACCATAATGAGAT  900

seq1  TA-GGAATTTTCAAAAGTGTAAATGTAATTTCTTGTTTTTATTCATTTTA  949
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATTTTCAAAAGTGTAAATGTAATTTCTTGTTTTTATTCATTTTA  950

seq1  TGTATGTATTTATGCAGGCTGAAATAATCTAGCCAT-GGAAAATTCCACT  998
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTATGTATTTATGCAGGCTGAAATAATCTAGCCATGGGAAAATTCCACT  1000

seq1  TTCACATAACATCTAGAAATAAACAACAAAATGAAACAGACAACGCAAAA  1048
      |||||||| ||||||| ||||||| |||||||||||||||| |||| |||
seq2  TTCACATAGCATCTAGGAATAAACCACAAAATGAAACAGAC-ACGC-AAA  1048

seq1  TGTATATACCCAGGAGAAAACACTACTTAGCTTGAGAAGGGGAGGCTTGT  1098
      |||||||| ||||||||||||||||| |||||   ||||||   ||||||
seq2  TGTATATA-CCAGGAGAAAACACTAC-TAGCT--GGAAGGG--AGCTTGT  1092

seq1  GAGGAGAAGAAACAGAAAGACGTAAGTAGAGCATGTGAGTAGACATGTTT  1148
      ||||||||| ||| ||||||||| ||| |||||||||||  ||  ||  |
seq2  GAGGAGAAG-AACCGAAAGACGT-AGT-GAGCATGTGAGATGAACTG--T  1137

seq1  GCCTAGCACACCGAGATACTTCAAGCACAGC-AGAAAGA-CTATACC  1193
      ||||||  || |||||||| |||||   ||| ||||||| |||||||
seq2  GCCTAG--CAGCGAGATAC-TCAAGGCAAGCGAGAAAGACCTATACC  1181