BAC Information

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BAC

Clone NameB6Ng01-219O12
Chromosome7 (Build37)
Map Location 65,436,030 - 65,437,171
singlet/doubletsinglet
Overlap genenone
Upstream geneGabrg3, Gabra5, Gabrb3, EG668807, LOC434189
Downstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219O12.bB6Ng01-219O12.g
ACCGA035606GA035607
length8701,130
definitionB6Ng01-219O12.b B6Ng01-219O12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcactttttgtgtgtgtgtggggtggggggatctaatatcccc
atagtgagtacatagcatgcatgccctttgggatctgagttatctcactc
aggatgatattgtctagttccatcgatttgcctgcaaaactcaggatgtc
ctcattcttaatagctgagtgtaaatgaaccacattttctgtatccattc
ttctgtcctgggacatctgagttgtttccagcttctgactatcacaaaca
aggccactacaaacatagtagaacacatgcctctgtggcatggtaggaca
tcttttgggtatattcccaggagtggtattgctgggtctttaggtagatc
tagttccaatattctgaggaccctccagatcaagtgagggactctgatcc
ataattgcttctgtctgaaagaactacaggcatggaaatggagaggagcc
tgaggaaaagaaggtcgagtgacaggcccaaagtggggtccaattcattg
ggaggtcccaagatctaacactattactgaggctatggagtgctcacaaa
aagggacctatcatgactgccctccaaaagaccccacaagcacctgaaag
agtcagatgtagatatttgcacccaatcaatggacagaagctgctgggcc
ctgtgactgtttcaggggaaagctggaagaagctgaggaggagggtgacc
ctgtagaaggaccagcagtcttgtataacctgaacatcggagagctctca
gacactggattaccaacctggcaacatacagcagctgatatgaggccccc
aacgcatataaagcagagactggaggatctgggtttagtcagagacgatg
caccaaaaccctcaagagac

gaattcagcatcttcagtttcattcagcggcttcctcttaattttaaggt
ttcctgtggtttcatgcacatcctgctctagcgataccctagctttggtg
ttttattttctctttctttggcataataccaatattttaaagattttttt
ttaaaaaggacttcaaaatgctagctttccattgcatgactcataatttc
attttttatttcttactctgtgcttcttcctttttccaacccttcagttg
gcatttaaacaacttactttcatttcacatttctaactgtttgatgttat
atttttcattaacacttcattaggtttatcccatagatttctatgtttat
gtttattaccagccttttgacatagaaatgtttaattgagattttggaat
tatccaattagctcctggctggcctagaatgaaggcttcttttctctcag
ccctcctgaatgaaaacaagatgtttagtgtttagtggtaagcagtgtgc
agcaagtgtctcagaatatcagcctcaggtagcacttttaatattggctc
ctcacacttgaattctgaaaaaaaaatatttctatcgtttcactttattg
aaccccctgaagatcccctcacccctcattgccagtgatcaatattcatg
ggcaccaacgttatttgagatttacaatttttgtttccttattttctgta
ataataatcacagagtttttattctattcagatttcacttatgtgtatac
atgttatatttctaaacattcttggaacacaatggtgtgaaaaacccctc
tttactggattctttctctccagatttatcatggattctactggcacagt
taatattttattttgtatacaagtgtagaattatttattacatctgctgt
atatataaaaaggcctgttttagtctagcttgattatttatggtccgaat
tttattttgaaactgttgctttctacattctatactgtttaaatttaaaa
ttatactttgtgttgcacatatatcagcacacagcttgttatatcattgt
gagtctatattggtatttggatgaatgaagtaggcctttaaggtagcaat
gggcatgatttatattagtttggtttgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65436030_65437171
seq2: B6Ng01-219O12.g_69_1198 (reverse)

seq1  TAACAAA-CAAACTATATATATATATCATACCCAATGCTACCTTAAAGGC  49
      ||||||| |||||||   ||||| ||||| |||| |||||||||||||| 
seq2  TAACAAACCAAACTA---ATATAAATCATGCCCATTGCTACCTTAAAGG-  46

seq1  CCTACCTCATCCATCAAATAACCAAATATAAGGACTCACAAAATGATATA  99
      ||||| |||| |||| ||  ||| ||||||  |||||||  |||||||| 
seq2  CCTACTTCATTCATCCAAATACC-AATATA--GACTCAC--AATGATAT-  90

seq1  AACAAGCTTGTGTGCTGAATATATGTGCAACACAAAGTATAATTTTTAAA  149
      ||||||| ||||||||| |||||||||||||||||||||||| |||||||
seq2  AACAAGC-TGTGTGCTG-ATATATGTGCAACACAAAGTATAA-TTTTAAA  137

seq1  ATTAAACAGTATAGAATGTAGAAAGCAACAGTTTCAAAATAAAATTCGGA  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACAGTATAGAATGTAGAAAGCAACAGTTTCAAAATAAAATTCGGA  187

seq1  CCATAAATAATCAAGCTAGACTAAAACAGGCCTTTTTATATATACAGCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAATAATCAAGCTAGACTAAAACAGGCCTTTTTATATATACAGCAG  237

seq1  ATGTAATAAATAATTCTACACTTGTATACAAAATAAAATATTAACTGTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATAAATAATTCTACACTTGTATACAAAATAAAATATTAACTGTGC  287

seq1  CAGTAGAATCCATGATAAATCTGGAGAGAAAGAATCCAGTAAAGAGGGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAATCCATGATAAATCTGGAGAGAAAGAATCCAGTAAAGAGGGGT  337

seq1  TTTTCACACCATTGTGTTCCAAGAATGTTTAGAAATATAACATGTATACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACACCATTGTGTTCCAAGAATGTTTAGAAATATAACATGTATACA  387

seq1  CATAAGTGAAATCTGAATAGAATAAAAACTCTGTGATTATTATTACAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTGAAATCTGAATAGAATAAAAACTCTGTGATTATTATTACAGAA  437

seq1  AATAAGGAAACAAAAATTGTAAATCTCAAATAACGTTGGTGCCCATGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGAAACAAAAATTGTAAATCTCAAATAACGTTGGTGCCCATGAAT  487

seq1  ATTGATCACTGGCAATGAGGGGTGAGGGGATCTTCAGGGGGTTCAATAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCACTGGCAATGAGGGGTGAGGGGATCTTCAGGGGGTTCAATAAA  537

seq1  GTGAAACGATAGAAATATTTTTTTTTCAGAATTCAAGTGTGAGGAGCCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACGATAGAAATATTTTTTTTTCAGAATTCAAGTGTGAGGAGCCAA  587

seq1  TATTAAAAGTGCTACCTGAGGCTGATATTCTGAGACACTTGCTGCACACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAGTGCTACCTGAGGCTGATATTCTGAGACACTTGCTGCACACT  637

seq1  GCTTACCACTAAACACTAAACATCTTGTTTTCATTCAGGAGGGCTGAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCACTAAACACTAAACATCTTGTTTTCATTCAGGAGGGCTGAGAG  687

seq1  AAAAGAAGCCTTCATTCTAGGCCAGCCAGGAGCTAATTGGATAATTCCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGCCTTCATTCTAGGCCAGCCAGGAGCTAATTGGATAATTCCAA  737

seq1  AATCTCAATTAAACATTTCTATGTCAAAAGGCTGGTAATAAACATAAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAATTAAACATTTCTATGTCAAAAGGCTGGTAATAAACATAAACA  787

seq1  TAGAAATCTATGGGATAAACCTAATGAAGTGTTAATGAAAAATATAACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCTATGGGATAAACCTAATGAAGTGTTAATGAAAAATATAACAT  837

seq1  CAAACAGTTAGAAATGTGAAATGAAAGTAAGTTGTTTAAATGCCAACTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTTAGAAATGTGAAATGAAAGTAAGTTGTTTAAATGCCAACTGA  887

seq1  AGGGTTGGAAAAAGGAAGAAGCACAGAGTAAGAAATAAAAAATGAAATTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGGAAAAAGGAAGAAGCACAGAGTAAGAAATAAAAAATGAAATTA  937

seq1  TGAGTCATGCAATGGAAAGCTAGCATTTTGAAGTCCTTTTTAAAAAAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATGCAATGGAAAGCTAGCATTTTGAAGTCCTTTTTAAAAAAAAA  987

seq1  TCTTTAAAATATTGGTATTATGCCAAAGAAAGAGAAAATAAAACACCAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAATATTGGTATTATGCCAAAGAAAGAGAAAATAAAACACCAAA  1037

seq1  GCTAGGGTATCGCTAGAGCAGGATGTGCATGAAACCACAGGAAACCTTAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGTATCGCTAGAGCAGGATGTGCATGAAACCACAGGAAACCTTAA  1087

seq1  AATTAAGAGGAAGCCGCTGAATGAAACTGAAGATGCTGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAGGAAGCCGCTGAATGAAACTGAAGATGCTGAATTC  1130


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