BAC Information

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BAC

Clone NameB6Ng01-220G21
Chromosome7 (Build37)
Map Location 58,713,533 - 58,876,673
singlet/doubletdoublet
Overlap geneLOC668779, Tmem16e
Upstream geneNell1, 4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971
Downstream geneSlc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220G21.bB6Ng01-220G21.g
ACCGA035988GA035989
length1,0811,125
definitionB6Ng01-220G21.b B6Ng01-220G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,875,572 - 58,876,673)(58,713,533 - 58,714,655)
sequence
gaattctttggaattctaagtttctttaattaactaatgcacaacacaat
actgaattatttctaattacaggtaaaatttgtacctataactaagcttg
ttagcgaagagtaactgataatgttttaaaaatttatttcaatatattta
cactctatttaaattttatttttccctccttatgacaccttttcttaaga
gggaggctatttttgccattgttgcttgttgggttttgagagatggtcct
acaaggttttccatcttagttgtgtataataccattgaacctatatcatt
aagcaaaacaattaaattgtgctgaattaatgtgagttatttcgcatgga
ccacaaccctcttaagatgcagtccaggcaagtgcttacgaaacagactg
tccttgagctacatccccaaggttaaaccttggatgctagctaaatcaac
caggggagtgcgttttacatagggactattggattacatcccagaggtac
ggtgcagagtcaaataagaatgttctctgacgatttcaaatgatatgtgg
aaaaaaatttcctaaaatagagagatgaaaaaaaatcacaaatagctaaa
accctttgcaattgttaaatccaaatccaaagcctataaaattgtatttc
attaagaagtatggttgagcaagaataccacgattacattcctgttattt
tgggacatatgcattatgtgaatgttatatattatattacgtatatactt
taaaaaccaggaagccatcttcaaaaatatccctggaatgccacaaaatt
gaatgcacttccataggagatagagtataaaagaaaaaaatatagggtac
aaaggaaaaaaaaaactcatcaaattgtttcattgcaaatttccagctcc
ttaggacttgttttacaagagcatttgttattggtattttatttatttat
attcaaatgttatccccttctagtttcctctcacaccccccctatgcctt
gcccctccccctactctatgaggtgctccccaatctgctcaagcctagca
ttcctatccttggtcatcatcctccatagga
gaattcctcctgatcagtagaggctggtctttgctggtaagcagctggaa
gatggccagactttgtctgactacaacattcaaaaggagtccacccttca
tctggtgttgagacttcggggtggtgctaagagaaggaagaagaagtctt
acaccactcccaagaagaacaagcataagaggaagaaggttaagttggct
gtgctgaaatactataaggtggatgaaaatggcaaaattatccgactttg
tcgagaacgtccttctgatgagtgtggtgctggagttttcatgggaagcc
actttgacaggcattactgtggcaagtgttgtctgacttactgcttcaac
aaaccagaagacaagtagttgtgtatacgttaataaaaagaaggaactca
aaaaaaaaatatggtttacaccactggttctgtcttcaattttgagttct
ttaaataagatatcaagacacacttgtttttttttttaatcctataagct
ccaactttatacaccagaaagtaggcctagtttcattaagtactgtttcc
aaagatactaagcctcagatctgttttgctccaaagccttaaatttttca
acacaaaggggaaaagaaaattttgaggaaaaagcatgaagttcaatatg
attaaatctacttggagctggaaagatggcacaggagttaaataccccgg
ctactcttcctgaggtcctatgttcttattcctaacagctcctaaccaaa
tttaactatatccactggatatgttgccctcttctggccagtgtgggcat
ttcatgcatgtggagtgcatccatacatacatgcaaaatgtaataaaaaa
tataaaactatgtaaaacaatggatctttaaaaacaatctcttgattttg
atgctatcatttattaatagtagaagaaaatcaaaactcctggatgtaaa
atgggtagctaacaaatcaaccaaacccaaacaacaagtaaatagcagat
atgcctctgatatgctctctgagctcaaaagctgaagactgaatcacaca
aaagtgttcttcgcccactccaaacatctgggaataaaaataacctaaat
tcgcaagtcaggggtttaataaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58875572_58876673
seq2: B6Ng01-220G21.b_42_1122 (reverse)

seq1  TCCTATGGAGGTTGGATGACCCAGGGTAGGGGAATGCTAGGGCTCTGAAG  50
      ||||||||||| | ||||||| ||| ||  |||||||||||   ||  ||
seq2  TCCTATGGAGGAT-GATGACCAAGGATA--GGAATGCTAGG---CTTGAG  44

seq1  CAGGATTGGGGGGAAGCACCCTCATAGAGGTAGGGGGAGGGGCAAGGGCA  100
      || ||||||||   |||| ||||||||| |||||||||||||||| ||||
seq2  CA-GATTGGGG---AGCA-CCTCATAGA-GTAGGGGGAGGGGCAA-GGCA  87

seq1  TAGGGGGGGTTGTGGAGAGGAAACTAGGAAGGGGGATAACATTTGAAATA  150
      ||||||||| ||| |||||||||||||  | |||||||||||||| ||||
seq2  TAGGGGGGG-TGT-GAGAGGAAACTAG--AAGGGGATAACATTTG-AATA  132

seq1  TAAATAAATAAAATAACCAATAAACAAATGCTCTTGTAAAACAAGTCCTA  200
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  TAAATAAATAAAAT-ACCAAT-AACAAATGCTCTTGTAAAACAAGTCCTA  180

seq1  AGGAGCTGGAAATTTTGCAATGAAACAATTTGATGAGTTTTTTTTTTCCT  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTGGAAA-TTTGCAATGAAACAATTTGATGAGTTTTTTTTTTCCT  229

seq1  TTGTACCCTATATTTTTTTCTTTTATACTCTATCTCCTATGGAAGTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCCTATATTTTTTTCTTTTATACTCTATCTCCTATGGAAGTGCAT  279

seq1  TCAATTTTGTGGCATTCCAGGGATATTTTTGAAGATGGCTTCCTGGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTGTGGCATTCCAGGGATATTTTTGAAGATGGCTTCCTGGTTTT  329

seq1  TAAAGTATATACGTAATATAATATATAACATTCACATAATGCATATGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATATACGTAATATAATATATAACATTCACATAATGCATATGTCC  379

seq1  CAAAATAACAGGAATGTAATCGTGGTATTCTTGCTCAACCATACTTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAACAGGAATGTAATCGTGGTATTCTTGCTCAACCATACTTCTTA  429

seq1  ATGAAATACAATTTTATAGGCTTTGGATTTGGATTTAACAATTGCAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATACAATTTTATAGGCTTTGGATTTGGATTTAACAATTGCAAAGG  479

seq1  GTTTTAGCTATTTGTGATTTTTTTTCATCTCTCTATTTTAGGAAATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGCTATTTGTGATTTTTTTTCATCTCTCTATTTTAGGAAATTTTT  529

seq1  TTCCACATATCATTTGAAATCGTCAGAGAACATTCTTATTTGACTCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACATATCATTTGAAATCGTCAGAGAACATTCTTATTTGACTCTGCA  579

seq1  CCGTACCTCTGGGATGTAATCCAATAGTCCCTATGTAAAACGCACTCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTACCTCTGGGATGTAATCCAATAGTCCCTATGTAAAACGCACTCCCC  629

seq1  TGGTTGATTTAGCTAGCATCCAAGGTTTAACCTTGGGGATGTAGCTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGATTTAGCTAGCATCCAAGGTTTAACCTTGGGGATGTAGCTCAAG  679

seq1  GACAGTCTGTTTCGTAAGCACTTGCCTGGACTGCATCTTAAGAGGGTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCTGTTTCGTAAGCACTTGCCTGGACTGCATCTTAAGAGGGTTGT  729

seq1  GGTCCATGCGAAATAACTCACATTAATTCAGCACAATTTAATTGTTTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATGCGAAATAACTCACATTAATTCAGCACAATTTAATTGTTTTGC  779

seq1  TTAATGATATAGGTTCAATGGTATTATACACAACTAAGATGGAAAACCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATATAGGTTCAATGGTATTATACACAACTAAGATGGAAAACCTT  829

seq1  GTAGGACCATCTCTCAAAACCCAACAAGCAACAATGGCAAAAATAGCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGACCATCTCTCAAAACCCAACAAGCAACAATGGCAAAAATAGCCTC  879

seq1  CCTCTTAAGAAAAGGTGTCATAAGGAGGGAAAAATAAAATTTAAATAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAAGAAAAGGTGTCATAAGGAGGGAAAAATAAAATTTAAATAGAG  929

seq1  TGTAAATATATTGAAATAAATTTTTAAAACATTATCAGTTACTCTTCGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATATATTGAAATAAATTTTTAAAACATTATCAGTTACTCTTCGCT  979

seq1  AACAAGCTTAGTTATAGGTACAAATTTTACCTGTAATTAGAAATAATTCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCTTAGTTATAGGTACAAATTTTACCTGTAATTAGAAATAATTCA  1029

seq1  GTATTGTGTTGTGCATTAGTTAATTAAAGAAACTTAGAATTCCAAAGAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTGTTGTGCATTAGTTAATTAAAGAAACTTAGAATTCCAAAGAAT  1079

seq1  TC  1102
      ||
seq2  TC  1081

seq1: chr7_58713533_58714655
seq2: B6Ng01-220G21.g_66_1190

seq1  GAATTCCTCCTGATCAGTAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTGATCAGTAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAA  50

seq1  GATGGCCAGACTTTGTCTGACTACAACATTCAAAAGGAGTCCACCCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCAGACTTTGTCTGACTACAACATTCAAAAGGAGTCCACCCTTCA  100

seq1  TCTGGTGTTGAGACTTCGGGGTGGTGCTAAGAGAAGGAAGAAGAAGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTTGAGACTTCGGGGTGGTGCTAAGAGAAGGAAGAAGAAGTCTT  150

seq1  ACACCACTCCCAAGAAGAACAAGCATAAGAGGAAGAAGGTTAAGTTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACTCCCAAGAAGAACAAGCATAAGAGGAAGAAGGTTAAGTTGGCT  200

seq1  GTGCTGAAATACTATAAGGTGGATGAAAATGGCAAAATTATCCGACTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAAATACTATAAGGTGGATGAAAATGGCAAAATTATCCGACTTTG  250

seq1  TCGAGAACGTCCTTCTGATGAGTGTGGTGCTGGAGTTTTCATGGGAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGAACGTCCTTCTGATGAGTGTGGTGCTGGAGTTTTCATGGGAAGCC  300

seq1  ACTTTGACAGGCATTACTGTGGCAAGTGTTGTCTGACTTACTGCTTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGACAGGCATTACTGTGGCAAGTGTTGTCTGACTTACTGCTTCAAC  350

seq1  AAACCAGAAGACAAGTAGTTGTGTATACGTTAATAAAAAGAAGGAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAAGACAAGTAGTTGTGTATACGTTAATAAAAAGAAGGAACTCA  400

seq1  AAAAAAAAATATGGTTTACACCACTGGTTCTGTCTTCAATTTTGAGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATATGGTTTACACCACTGGTTCTGTCTTCAATTTTGAGTTCT  450

seq1  TTAAATAAGATATCAAGACACACTTGTTTTTTTTTTTAATCCTATAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAGATATCAAGACACACTTGTTTTTTTTTTTAATCCTATAAGCT  500

seq1  CCAACTTTATACACCAGAAAGTAGGCCTAGTTTCATTAAGTACTGTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTTATACACCAGAAAGTAGGCCTAGTTTCATTAAGTACTGTTTCC  550

seq1  AAAGATACTAAGCCTCAGATCTGTTTTGCTCCAAAGCCTTAAATTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACTAAGCCTCAGATCTGTTTTGCTCCAAAGCCTTAAATTTTTCA  600

seq1  ACACAAAGGGGAAAAGAAAATTTTGAGGAAAAAGCATGAAGTTCAATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGGGGAAAAGAAAATTTTGAGGAAAAAGCATGAAGTTCAATATG  650

seq1  ATTAAATCTACTTGGAGCTGGAAAGATGGCACAGGAGTTAAATACCCCGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCTACTTGGAGCTGGAAAGATGGCACAGGAGTTAAATACCCCGG  700

seq1  CTACTCTTCCTGAGGTCCTATGTTCTTATTCCTAACAGCTCCTAACCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTTCCTGAGGTCCTATGTTCTTATTCCTAACAGCTCCTAACCAAA  750

seq1  TTTAACTATATCCACTGGATATGTTGCCCTCTTCTGGCCAGTGTGGGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTATATCCACTGGATATGTTGCCCTCTTCTGGCCAGTGTGGGCAT  800

seq1  TTCATGCATGTGGAGTGCATCCATACATACATGCAAAATGT-ATAAAAAA  849
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCATGCATGTGGAGTGCATCCATACATACATGCAAAATGTAATAAAAAA  850

seq1  TATAAAACTATGTAAAACAATGGATCTTTAAAAACAATCTCTTGATTTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACTATGTAAAACAATGGATCTTTAAAAACAATCTCTTGATTTTG  900

seq1  ATGCTATCATTTATTAATAGTAGAAGAAAATCAAAACTCCTGGATGTAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATCATTTATTAATAGTAGAAGAAAATCAAAACTCCTGGATGTAAA  950

seq1  ATGGGTAGCTAACAAAATCAACCAAACCAAAACAACAAAGTAAATAGCAG  999
      ||||||||||||| |||||||||||||| ||||||| |||||||||||||
seq2  ATGGGTAGCTAAC-AAATCAACCAAACCCAAACAAC-AAGTAAATAGCAG  998

seq1  ATATGCCTCTGATAATGCTCTCTGAGCTCAAAAGCTGAAGACTGAATCAC  1049
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATGCCTCTGAT-ATGCTCTCTGAGCTCAAAAGCTGAAGACTGAATCAC  1047

seq1  AC-AGAGTGTTTCTCG-CCACTTCAAACATCT-GGAATAAAA--TACCT-  1093
      || | ||||||  ||| ||||| ||||||||| |||||||||   |||| 
seq2  ACAAAAGTGTTCTTCGCCCACTCCAAACATCTGGGAATAAAAATAACCTA  1097

seq1  AATCCGCAGGTCAGGGTGTTTAATATAATT  1123
      ||| |||| ||||||| |||||||| ||||
seq2  AATTCGCAAGTCAGGG-GTTTAATA-AATT  1125