BAC Information

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BAC

Clone NameB6Ng01-221E03
Chromosome7 (Build37)
Map Location 64,704,542 - 64,814,885
singlet/doubletdoublet
Overlap geneGabra5
Upstream genep, LOC100040839, Gabrg3
Downstream geneGabrb3, EG668807, LOC434189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221E03.bB6Ng01-221E03.g
ACCGA036597GA036598
length850225
definitionB6Ng01-221E03.b B6Ng01-221E03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,704,542 - 64,705,391)(64,814,661 - 64,814,885)
sequence
gaattcatctagctagtgaccagagcagcctcacaatgtggcaaaaatag
tctttgtgttttgttttttgatcaaatcaaaccataatcttcatatataa
agagcagcataaatttaaactatagctaatgttccagagatgagaccaat
tcatgttccttcaggcatgggactcagtggtctcagatgacctacctgag
gacttcagactcaatggcccccctcatcacaaacactggtgtttaccgcc
acccacaagtgatgccaagaaatactggtgagagtcacgtataccaccac
caccctaagaaacaaatgatgtgattgctctggagcccttgaaggtaaca
gtttgagaaaataaatgaaagatttccttccacctaacgttttgttcatc
atacaagcttacttatctcctgtaaccaagcctctttttggaagcatagg
gtaatccataatgaaaccctttggtcagaaaggctcccttccaggaacag
cagaaggtggaaatcagacaactattatctggatccccattaaaaaaaga
tactaaggagagttgatactcagaagtgtcagcttcccagaaggaggatg
tggttaagtcaggtaggatttttacgctcagggtccggctgaggaacccg
agccatcgccgcagcacagccacaaaggaatgagctgaatcttcagggga
gagtgccagacaggagctagaactgcgatgtctacagatgcacacggtca
ccccaaacctccactttaccaccacactgcagcctggaagactgagagta
aagccatgaaactattcaaacgtgtgtgtgggtgggtatgtgtgtgtgtg


agcacagtggtgctgcagagggaattggaactttttctgatttaaaactt
aaatcccacctgcatgaacgtgttgtacaacaacaacaaccaaaaaaaaa
aactttgcatgggttgatttgattagcatgcacagtcagaaatacttggt
gatacttgggtcattaggttccactttccttcatcttcatcccctgaact
caacataagaatgcagggggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64704542_64705391
seq2: B6Ng01-221E03.b_44_893

seq1  GAATTCATCTAGCTAGTGACCAGAGCAGCCTCACAATGTGGCAAAAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTAGCTAGTGACCAGAGCAGCCTCACAATGTGGCAAAAATAG  50

seq1  TCTTTGTGTTTTGTTTTTTGATCAAATCAAACCATAATCTTCATATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTTTTGTTTTTTGATCAAATCAAACCATAATCTTCATATATAA  100

seq1  AGAGCAGCATAAATTTAAACTATAGCTAATGTTCCAGAGATGAGACCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCATAAATTTAAACTATAGCTAATGTTCCAGAGATGAGACCAAT  150

seq1  TCATGTTCCTTCAGGCATGGGACTCAGTGGTCTCAGATGACCTACCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCCTTCAGGCATGGGACTCAGTGGTCTCAGATGACCTACCTGAG  200

seq1  GACTTCAGACTCAATGGCCCCCCTCATCACAAACACTGGTGTTTACCGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGACTCAATGGCCCCCCTCATCACAAACACTGGTGTTTACCGCC  250

seq1  ACCCACAAGTGATGCCAAGAAATACTGGTGAGAGTCACGTATACCACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAAGTGATGCCAAGAAATACTGGTGAGAGTCACGTATACCACCAC  300

seq1  CACCCTAAGAAACAAATGATGTGATTGCTCTGGAGCCCTTGAAGGTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTAAGAAACAAATGATGTGATTGCTCTGGAGCCCTTGAAGGTAACA  350

seq1  GTTTGAGAAAATAAATGAAAGATTTCCTTCCACCTAACGTTTTGTTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGAAAATAAATGAAAGATTTCCTTCCACCTAACGTTTTGTTCATC  400

seq1  ATACAAGCTTACTTATCTCCTGTAACCAAGCCTCTTTTTGGAAGCATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGCTTACTTATCTCCTGTAACCAAGCCTCTTTTTGGAAGCATAGG  450

seq1  GTAATCCATAATGAAACCCTTTGGTCAGAAAGGCTCCCTTCCAGGAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCATAATGAAACCCTTTGGTCAGAAAGGCTCCCTTCCAGGAACAG  500

seq1  CAGAAGGTGGAAATCAGACAACTATTATCTGGATCCCCATTAAAAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGTGGAAATCAGACAACTATTATCTGGATCCCCATTAAAAAAAGA  550

seq1  TACTAAGGAGAGTTGATACTCAGAAGTGTCAGCTTCCCAGAAGGAGGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGGAGAGTTGATACTCAGAAGTGTCAGCTTCCCAGAAGGAGGATG  600

seq1  TGGTTAAGTCAGGTAGGATTTTTACGCTCAGGGTCCGGCTGAGGAACCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGTCAGGTAGGATTTTTACGCTCAGGGTCCGGCTGAGGAACCCG  650

seq1  AGCCATCGCCGCAGCACAGCCACAAAGGAATGAGCTGAATCTTCAGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCGCCGCAGCACAGCCACAAAGGAATGAGCTGAATCTTCAGGGGA  700

seq1  GAGTGCCAGACAGGAGCTAGAACTGCGATGTCTACAGATGCACACGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCAGACAGGAGCTAGAACTGCGATGTCTACAGATGCACACGGTCA  750

seq1  CCCCAAACCTCCACTTTACCACCACACTGCAGCCTGGAAGACTGAGAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAACCTCCACTTTACCACCACACTGCAGCCTGGAAGACTGAGAGTA  800

seq1  AAGCCATGAAACTATTCAAACGTGTGTGTGGGTGGGTATGTGTGTGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATGAAACTATTCAAACGTGTGTGTGGGTGGGTATGTGTGTGTGTG  850


seq1: chr7_64814661_64814885
seq2: B6Ng01-221E03.g_69_293 (reverse)

seq1  CCACTCCCCCTGCATTCTTATGTTGAGTTCAGGGGATGAAGATGAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCCCTGCATTCTTATGTTGAGTTCAGGGGATGAAGATGAAGGAA  50

seq1  AGTGGAACCTAATGACCCAAGTATCACCAAGTATTTCTGACTGTGCATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAACCTAATGACCCAAGTATCACCAAGTATTTCTGACTGTGCATGC  100

seq1  TAATCAAATCAACCCATGCAAAGTTTTTTTTTTTGGTTGTTGTTGTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAATCAACCCATGCAAAGTTTTTTTTTTTGGTTGTTGTTGTTGTA  150

seq1  CAACACGTTCATGCAGGTGGGATTTAAGTTTTAAATCAGAAAAAGTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACGTTCATGCAGGTGGGATTTAAGTTTTAAATCAGAAAAAGTTCCA  200

seq1  ATTCCCTCTGCAGCACCACTGTGCT  225
      |||||||||||||||||||||||||
seq2  ATTCCCTCTGCAGCACCACTGTGCT  225


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