BAC Information

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BAC

Clone NameB6Ng01-221G05
Chromosome7 (Build37)
Map Location 5,524,197 - 5,525,151
singlet/doubletsinglet
Overlap genenone
Upstream genePtprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705
Downstream geneLOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221G05.bB6Ng01-221G05.g
ACCGA036696GA036697
length753973
definitionB6Ng01-221G05.b B6Ng01-221G05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaactgaggagtatctaatggctgagaggctcctaaagaaatg
ttcaaagtccttagtgatcagagaaatgcaaatcaaaacgacaatgatat
ttcacctcacactattcagaatagctaagatcaaaacctcatgtgacaac
acatgttggagaggatgtggagaaagaacactcttccattgctggtggga
ttgcaaacttttataaccactctgaaaagcaatcagaaggttcctcagaa
aactggaactagatctacccgaagacccagatatacttctcttgggaata
tatccaaaagatgccccaccatgccacaggggcacatgtgttccactact
ttcatagaggccttatttgtgatagccagacctggaaacaacccagatgt
cccaagagagaagaatggatacagaaaatgtggttcatttcacaatgcaa
tactactcagctattaagaacgagggcatcctgagttttgtaaacaaatg
ggtgtaactagaaaatatcttgagtgaggtaacttagacacaaaagaatg
tgcatggtatgtacccactgataagtggatatgaacaaaaaacaaaacaa
aacaaaacaaaaccacaccagacagaatattcaaagatacactctacaga
actcaaaatcctcaacaagttgaagtgccaaagttaagataccacagttc
ccacttgggagagagaagaaagcaatcacaaatggggagggagggaggga
agt
gaattctttttttagctctgagccccattttttaatggggttatttgatt
ttctggagtccacctgttgagttccttatatacaatggatattagtcccc
tatctgatttacgatagataaagactcttcctctgagcatgactctgctc
catttaccaggaagaagtatgacaaactggtaggtgctcaagacacaggt
ggaagacaagtttgtgcttagagccaccaggcaaacgaagtaccaaagtt
tacatgagaggtcactgggggccttccatggaagaaatactgtactgatg
tttggaattgccaagaggatgagattgaatgcactggccaccactaagtt
tgttactaagtcctgtatgggtgtgggttgacagtcaaaattacagggaa
attatggatgaacagaaggaaatttgccacagtcccaaccccaacctgac
aaagcaaaaatatatttagagccatttcctccttgtttttcagggtttta
ttatgggacagcatggagatggcttcattagacaatggagtaatgatcaa
ttttgacaatcctgtcttcaattgtctcctcaattatctaagtctttgaa
ctgatttggagtccttttcccaaagaaatgtggaacaactatatgacact
gcaggagctatgtctggaagacaatttgtagacattgatctagattacca
atttttacacttatcttactttaaattcctttatgaaggagatgtatata
tgatgcaactccatctctgttggtcaacaacatgacataaatttttaatg
gtctctgcatattgatacatgaacattaataggacagaagtgcatttttt
gctttcatttagcattcaacattctttcctcatgtaataaacagttatat
taagaaatacaaaataagtttgtttggagaaatggttacttggagataat
atgtcttcttcctcatgtttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_5524197_5525151
seq2: B6Ng01-221G05.g_68_1040

seq1  GAATTCTTTTTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCCACCTGTTGAGTTCCTTATATACAATGGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTGTTGAGTTCCTTATATACAATGGATATTAGTCCCC  100

seq1  TATCTGATTTACGATAGATAAAGACTCTTCCTCTGAGCATGACTCTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTACGATAGATAAAGACTCTTCCTCTGAGCATGACTCTGCTC  150

seq1  CATTTACCAGGAAGAAGTATGACAAACTGGTAGGTGCTCAAGACACAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACCAGGAAGAAGTATGACAAACTGGTAGGTGCTCAAGACACAGGT  200

seq1  GGAAGACAAGTTTGTGCTTAGAGCCACCAGGCAAACGAAGTACCAAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACAAGTTTGTGCTTAGAGCCACCAGGCAAACGAAGTACCAAAGTT  250

seq1  TACATGAGAGGTCACTGGGGGCCTTCCATGGAAGAAATACTGTACTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAGAGGTCACTGGGGGCCTTCCATGGAAGAAATACTGTACTGATG  300

seq1  TTTGGAATTGCCAAGAGGATGAGATTGAATGCACTGGCCACCACTAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATTGCCAAGAGGATGAGATTGAATGCACTGGCCACCACTAAGTT  350

seq1  TGTTACTAAGTCCTGTATGGGTGTGGGTTGACAGTCAAAATTACAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTAAGTCCTGTATGGGTGTGGGTTGACAGTCAAAATTACAGGGAA  400

seq1  ATTATGGATGAACAGAAGGAAATTTGCCACAGTCCCAACCCCAACCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGATGAACAGAAGGAAATTTGCCACAGTCCCAACCCCAACCTGAC  450

seq1  AAAGCAAAAATATATTTAGAGCCATTTCCTCCTTGTTTTTCAGGGTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAAATATATTTAGAGCCATTTCCTCCTTGTTTTTCAGGGTTTTA  500

seq1  TTATGGGACAGCATGGAGATGGCTTCATTAGACAATGGAGTAATGATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGACAGCATGGAGATGGCTTCATTAGACAATGGAGTAATGATCAA  550

seq1  TTTTGACAATCCTGTCTTCAATTGTCTCCTCAATTATCTAAGTCTTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACAATCCTGTCTTCAATTGTCTCCTCAATTATCTAAGTCTTTGAA  600

seq1  CTGATTTGGAGTCCTTTTCCCAAAGAAATGTGGAACAACTATATGACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTGGAGTCCTTTTCCCAAAGAAATGTGGAACAACTATATGACACT  650

seq1  GCAGGAGCTATGTCTGGAAGACAATTTGTAGACATTGATCTAGATTACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGCTATGTCTGGAAGACAATTTGTAGACATTGATCTAGATTACCA  700

seq1  A-TTTTACACTTATCTTACTTTAAATTCCTTTATGAAGGAGATGTATATA  749
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTACACTTATCTTACTTTAAATTCCTTTATGAAGGAGATGTATATA  750

seq1  TGATGCAACTCCATCTCTGTTGGTCAACAACATGACATAAATTTT--ATG  797
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  TGATGCAACTCCATCTCTGTTGGTCAACAACATGACATAAATTTTTAATG  800

seq1  GTCTCTGCATATTGATACATGAACATTTATA-GACAGAAGTGCA-TTTTT  845
      ||||||||||||||||||||||||||| ||| |||||||||||| |||||
seq2  GTCTCTGCATATTGATACATGAACATTAATAGGACAGAAGTGCATTTTTT  850

seq1  GC-TTCA-TTAGCATTCAACA-TCTTTCCTCATGTTAT-AACAG-TATAT  890
      || |||| ||||||||||||| ||||||||||||| || ||||| |||||
seq2  GCTTTCATTTAGCATTCAACATTCTTTCCTCATGTAATAAACAGTTATAT  900

seq1  TAAGAAATAC-AAATTAGTT--GTTGGAGAAATGTTT--CTGGAGATA--  933
      |||||||||| |||| ||||   ||||||||||| ||   ||||||||  
seq2  TAAGAAATACAAAATAAGTTTGTTTGGAGAAATGGTTACTTGGAGATAAT  950

seq1  ATGTCTTCTT-CTCATGTTTGTG  955
      |||||||||| ||||||||||||
seq2  ATGTCTTCTTCCTCATGTTTGTG  973