BAC Information

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BAC

Clone NameB6Ng01-221M08
Chromosome7 (Build37)
Map Location 87,589,713 - 87,702,756
singlet/doubletdoublet
Overlap geneBlm
Upstream geneBC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647
Downstream geneCrtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221M08.bB6Ng01-221M08.g
ACCGA036969GA036970
length1,0321,132
definitionB6Ng01-221M08.b B6Ng01-221M08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,702,231 - 87,702,756)(87,589,713 - 87,590,824)
sequence
gaattccaggagtgggaaagggtggggcaagctggatagcatttccagtt
gttgttttgtttttgagacaggttttctctgtgtggccctggctgtcctg
gaactcactttgtagaccaggctggcctcgaactcagaaatctgcctgcc
tctgcctcccgagtgctgggattaaaggcgtgcaccaccatgcccggctg
catttgcagttttacctctgccttcccatgtttgtgtcaggttactcccc
tgcctcagataggagggcctcagcacttcagctccttctttatcaagtcc
ctttgattcccttctcctcccctggcctagctcttgcatgcctcactaac
acaaaggcaagtgtcacagaggttccccagattcttactgccctccctaa
caccgactctcacgtaggagaattgtcacctctgtggggtcatgccagga
agcttgggagagcaagttgagattcagagacttggcaggcacacacctga
aactttggcaactccctactccctgccagactcctggcctgggactcgtg
ccacactccccacataaggaaccatgacctgtggtcacataggcccagaa
cagagttctccatgctaatgaggtacctagaggccctgagggcttagcca
ataagcttctcttcccagacattcttccctgcaaaaggtatttaatcttg
gttccacccggagaagttggtacggtatggtatacatctattttccacaa
tgaacagccaataaacgatatagataatcatggaccgtctcttttcattt
accaccactatgaggaacatgcagaagggtcttcgcctacagagccgcaa
gctaagatctcccatagaaaggcctctcttgcacttccagcctgttctcc
acccaagctaaaggacaccatccactgagcccaagccagagctgcggcta
gacacctggccccagcacgttgggacattttcttccattcctttgcgctt
tccatgacctcccagaagcaccttgaatgtcc
gaattccatcttcaagagaggaagctgaggcaagcgaggcagagcgctca
gggagcaaagcagataagaaggcgcctgactctggctggcccaccactcc
tcgctgtgaatgtctgagcgaggactgtatggtgcctcttcctcccctgg
cccactgcccggtgccacactgaatatgtcctcgacagtctttgatgagg
cagatcctcacttcctaggcttatctccacaccagactctggggcagctc
gagtcacgaatgttataacacaccactgcccagggcttccctcccagtgt
gctctcctgctgtggggaagagcctagccaccaaggaaggatcagcctgc
tggcttcagacaggtaggtatgtccctgcaagtgagctagccagaccttc
agttacttcacctgttggtgacactggtccctttgacagctatggtctca
accccagaaatttgctcacattatcttggcaggctcagagcaatcttcgt
tacaaggtatgcggttgtgatctctcggaggcacagataagttaagcaat
gtactcaagctcacacagtaaatggtaaacttggctttcgaccctaagaa
acctaagcccacttaacactcatctccactgaaagaactggtaggagagc
ctgggccacgagttgtgtgttcctagacagggtgacttggtcctgccagg
ccttaagcagagaactctaagcaaatatcacacccccgtgttctgtagaa
agcctctgtttcctgttggtgcctgcagcccctgaagagccctcagcaaa
ccttatcatgaagcagcatttgcctagcccagcggggagacagctccgct
cccgggcgggcggatctggctgatgactgcccttattttgaccccacagg
ctggcaaggcctggggaatgtcagctcacactttgccctccacagctttc
aagaagttttctttgcttccagtacactcagcaaagtgcatgcttgggag
tggcagattctgtttccttgtccacccaatctctctttatgaatgtactt
ttgtggggagccttggagcagagaaagccctcagtcaacccaatcgccag
cttcacattgtgttatgctctgacttcataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_87702231_87702756
seq2: B6Ng01-221M08.b_48_573 (reverse)

seq1  GCAGGGAGTAGGGAGTTGCCAAAGTTTCAGGTGTGTGCCTGCCAAGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAGTAGGGAGTTGCCAAAGTTTCAGGTGTGTGCCTGCCAAGTCTC  50

seq1  TGAATCTCAACTTGCTCTCCCAAGCTTCCTGGCATGACCCCACAGAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTCAACTTGCTCTCCCAAGCTTCCTGGCATGACCCCACAGAGGTG  100

seq1  ACAATTCTCCTACGTGAGAGTCGGTGTTAGGGAGGGCAGTAAGAATCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTCCTACGTGAGAGTCGGTGTTAGGGAGGGCAGTAAGAATCTGG  150

seq1  GGAACCTCTGTGACACTTGCCTTTGTGTTAGTGAGGCATGCAAGAGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTCTGTGACACTTGCCTTTGTGTTAGTGAGGCATGCAAGAGCTAG  200

seq1  GCCAGGGGAGGAGAAGGGAATCAAAGGGACTTGATAAAGAAGGAGCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGGAGGAGAAGGGAATCAAAGGGACTTGATAAAGAAGGAGCTGAA  250

seq1  GTGCTGAGGCCCTCCTATCTGAGGCAGGGGAGTAACCTGACACAAACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAGGCCCTCCTATCTGAGGCAGGGGAGTAACCTGACACAAACATG  300

seq1  GGAAGGCAGAGGTAAAACTGCAAATGCAGCCGGGCATGGTGGTGCACGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCAGAGGTAAAACTGCAAATGCAGCCGGGCATGGTGGTGCACGCC  350

seq1  TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAG  400

seq1  GCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCCACACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCCACACAGAG  450

seq1  AAAACCTGTCTCAAAAACAAAACAACAACTGGAAATGCTATCCAGCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTGTCTCAAAAACAAAACAACAACTGGAAATGCTATCCAGCTTGC  500

seq1  CCCACCCTTTCCCACTCCTGGAATTC  526
      ||||||||||||||||||||||||||
seq2  CCCACCCTTTCCCACTCCTGGAATTC  526

seq1: chr7_87589713_87590824
seq2: B6Ng01-221M08.g_66_1197

seq1  GAATTCCATCTTCAAGAGAGGAAGCTGAGGCAAGCGAGGCAGAGCGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTTCAAGAGAGGAAGCTGAGGCAAGCGAGGCAGAGCGCTCA  50

seq1  GGGAGCAAAGCAGATAAGAAGGCGCCTGACTCTGGCTGGCCCACCACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAAAGCAGATAAGAAGGCGCCTGACTCTGGCTGGCCCACCACTCC  100

seq1  TCGCTGTGAATGTCTGAGCGAGGACTGTATGGTGCCTCTTCCTCCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGTGAATGTCTGAGCGAGGACTGTATGGTGCCTCTTCCTCCCCTGG  150

seq1  CCCACTGCCCGGTGCCACACTGAATATGTCCTCGACAGTCTTTGATGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGCCCGGTGCCACACTGAATATGTCCTCGACAGTCTTTGATGAGG  200

seq1  CAGATCCTCACTTCCTAGGCTTATCTCCACACCAGACTCTGGGGCAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCTCACTTCCTAGGCTTATCTCCACACCAGACTCTGGGGCAGCTC  250

seq1  GAGTCACGAATGTTATAACACACCACTGCCCAGGGCTTCCCTCCCAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACGAATGTTATAACACACCACTGCCCAGGGCTTCCCTCCCAGTGT  300

seq1  GCTCTCCTGCTGTGGGGAAGAGCCTAGCCACCAAGGAAGGATCAGCCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCTGCTGTGGGGAAGAGCCTAGCCACCAAGGAAGGATCAGCCTGC  350

seq1  TGGCTTCAGACAGGTAGGTATGTCCCTGCAAGTGAGCTAGCCAGACCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCAGACAGGTAGGTATGTCCCTGCAAGTGAGCTAGCCAGACCTTC  400

seq1  AGTTACTTCACCTGTTGGTGACACTGGTCCCTTTGACAGCTATGGTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTCACCTGTTGGTGACACTGGTCCCTTTGACAGCTATGGTCTCA  450

seq1  ACCCCAGAAATTTGCTCACATTATCTTGGCAGGCTCAGAGCAATCTTCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGAAATTTGCTCACATTATCTTGGCAGGCTCAGAGCAATCTTCGT  500

seq1  TACAAGGTATGCGGTTGTGATCTCTCGGAGGCACAGATAAGTTAAGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGTATGCGGTTGTGATCTCTCGGAGGCACAGATAAGTTAAGCAAT  550

seq1  GTACTCAAGCTCACACAGTAAATGGTAAACTTGGCTTTCGACCCTAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCAAGCTCACACAGTAAATGGTAAACTTGGCTTTCGACCCTAAGAA  600

seq1  ACCTAAGCCCACTTAACACTCATCTCCACTGAAAGAACTGGTAGGAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGCCCACTTAACACTCATCTCCACTGAAAGAACTGGTAGGAGAGC  650

seq1  CTGGGCCACGAGTTGTGTGTTCCTAGACAGGGTGACTTGGTCCTGCCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCACGAGTTGTGTGTTCCTAGACAGGGTGACTTGGTCCTGCCAGG  700

seq1  CCTTAAGCAGAGAACTCTAAGCAAATATCACA-CCCCGTGTTCTGTAGAA  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCTTAAGCAGAGAACTCTAAGCAAATATCACACCCCCGTGTTCTGTAGAA  750

seq1  AGCCTCTGTTTCCTGTTGGTGCCTGCAGCCCCTGAAGAGCCCTCAGCAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGTTTCCTGTTGGTGCCTGCAGCCCCTGAAGAGCCCTCAGCAAA  800

seq1  CCTTATCATGAAGCAGCATTTGCCTAGCCCAGCGGGGAGACAGCTCCGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCATGAAGCAGCATTTGCCTAGCCCAGCGGGGAGACAGCTCCGCT  850

seq1  CCCGGGCGGGCGGATCTGGCTGATGACTGCCCTTA-TTTGACCCCACAGG  898
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCCGGGCGGGCGGATCTGGCTGATGACTGCCCTTATTTTGACCCCACAGG  900

seq1  CTGGCAAGGCCTGGGGAATGTCAGCTCACACTT--GCCTCCACAGCTTTC  946
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  CTGGCAAGGCCTGGGGAATGTCAGCTCACACTTTGCCCTCCACAGCTTTC  950

seq1  AAGAAGTTTCCTTTGCTTCCAGTACACTCAGCAAAGTGCATGC-TGGGAG  995
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  AAGAAGTTTTCTTTGCTTCCAGTACACTCAGCAAAGTGCATGCTTGGGAG  1000

seq1  TGGCAGA-TCTG-TTCCTTGTC--ACCAA--TCTCTTTAAG-ATGTAC-T  1037
      ||||||| |||| |||||||||   ||||  |||||||| | |||||| |
seq2  TGGCAGATTCTGTTTCCTTGTCCACCCAATCTCTCTTTATGAATGTACTT  1050

seq1  TTGTGGGGAG-CTGGGGGCAGAGA----GCTCAG-CAA-CCAAGCGCCAG  1080
      |||||||||| || || |||||||     ||||| ||| |||| ||||||
seq2  TTGTGGGGAGCCTTGGAGCAGAGAAAGCCCTCAGTCAACCCAATCGCCAG  1100

seq1  CTTCACA-TGTGTAAGGCTCTGACTTTCATACA  1112
      ||||||| ||||| | |||||||| ||||||||
seq2  CTTCACATTGTGTTATGCTCTGAC-TTCATACA  1132