BAC Information

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BAC

Clone NameB6Ng01-221N18
Chromosome7 (Build37)
Map Location 69,054,346 - 69,055,499
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934
Downstream geneLOC100041293, Ndn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221N18.bB6Ng01-221N18.g
ACCGA037034GA037035
length1,1531,158
definitionB6Ng01-221N18.b B6Ng01-221N18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttcaaattttcaccattattcattttcattttcaataaaatc
catccaataattccttacaacagtaaagtcttagatataggatcccctat
gttattcataatgttattttttgtactccttaccaccatggtatgttaat
gtaaacactgcaagttacagtactacaaacttcaacgtaaactgcattac
tttaccacacttttaaagtgttaaaatttgccaaatttaggcctttgaag
ggtaatagtaccttggtgttcaaagccatgtatgaattattcactgtatc
ttttctgagtaatgcagccatatatcacggcttcagggggaattcatgcc
taatgcaggaaacctggtttactacacaagaaggaaagatcagtaaagta
aactgaaggaacaacatttttctgataatttcctgaaatcacttaatttt
taagctatgttacaaataactatcctaatacctacagacataattagctc
tctccctcatcaaaaacctttattttctacattactgaatttcacaacca
ctcaaaatgtaaagaaccaaagaaagtggattgactgacattaagcaatg
gatacctaaaatttgtcattattccaagactcagaaaatattgcataaaa
caggaaaacaggatataaaccccaaatgaatagcctatctactgtgagaa
gtgtcttttgtaaagtataggtaagctacacacgtagaatctcaaaaatc
tttcacacataaataaaaaagatcaatactttcaatgccaaggagtatag
gtaacacaactcaagaccccactcttaactgaaagttccagggaaatgat
ggatgcaaagagagggacaataagggacacaaacactgatagcatacaag
gtataagtaggtaagataaggaatgtgaatatatattcctgtataagtga
gaatcaataatagtgaaaaagtcattagcatttgatatttaatggaccac
aatgccattggcagagtctaggagaaaggaggaaatattgtaaatactat
atataaactttttaaactacatcaaagagcttagaatataatgtgtgtac
accacatacataaattatataagttatattcatatacatacgtatatata
tat
gaattctttacagaatgagataaaattttgctagaataggatggcccgtt
atctgtcttaataagtttaggcaatcccatggcgttaatggcttgtaggc
aatgatcaattacgtttttagaaacctctcctgtatgcagagaaacaaaa
agaaatcctgaacaagtatagatacaaacatgtatatattttaattttcc
aaattttgcataatgagttatatccatttgccaaatatgattaggcataa
gacctctagaattgactcctaaatgtggcactggagataatgtaatacat
ttaggacattgttttacaatcattcttgcttgctccttagtgatcttatg
ttggagccttaaggtatggctagagagatgaaacttttcatgatcacgtt
tggccaaagcaacaggaattaaggcttctcctattagagctctgtcaatg
taatcattgccttcagctaaaggtccaggaagaccagagtgagatcgtat
gtggctaatataaaacagattttcccgggcaagaatgatgttttgcaatt
ctgaaaataaggatcacggtggcatattaaagttaaacgtaccacaggtc
tccaataagggtactgattgtgcaacatataaactgtccgtaaagatatt
aaaaggctcatgcacagactaaaagaccttcagtattgctgttaatttgg
ctaactgagccgaaaggccaggagtctctatgataacttgttgattatta
ataagatatccatctcgcccttgagaggagccatcagtaaaaatcaatac
agcattatataaaggctgtaaggaagtaattttaggaaatatcacctcat
gtacatttaaaaattttatcaacctatcttgggggtagtggctgtctata
gttacattaaaccctatttgtgcaagcaaccaatccgtactatgctgttt
cagccaagtgtcttgactgaacgtgttaggctgacatattatctggctct
tgccaaaatagttagtgcttgctttcttcagtgatagtcatcttgggcca
cttacttcatgatatggcagatctacattaggagaatttccctcatatat
atccacattatactatttttgcctatagcattcctggtatggacacatgt
gagcctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_69054346_69055499
seq2: B6Ng01-221N18.b_49_1201

seq1  GAATTCTCTTCAAATTTTCACCATTATTCATTTTCATTTTCAATAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCAAATTTTCACCATTATTCATTTTCATTTTCAATAAAATC  50

seq1  CATCCAATAATTCCTTACAACAGTAAAGTCTTAGATATAGGATCCCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAATAATTCCTTACAACAGTAAAGTCTTAGATATAGGATCCCCTAT  100

seq1  GTTATTCATAATGTTATTTTTTGTACTCCTTACCACCATGGTATGTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCATAATGTTATTTTTTGTACTCCTTACCACCATGGTATGTTAAT  150

seq1  GTAAACACTGCAAGTTACAGTACTACAAACTTCAACGTAAACTGCATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACACTGCAAGTTACAGTACTACAAACTTCAACGTAAACTGCATTAC  200

seq1  TTTACCACACTTTTAAAGTGTTAAAATTTGCCAAATTTAGGCCTTTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCACACTTTTAAAGTGTTAAAATTTGCCAAATTTAGGCCTTTGAAG  250

seq1  GGTAATAGTACCTTGGTGTTCAAAGCCATGTATGAATTATTCACTGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATAGTACCTTGGTGTTCAAAGCCATGTATGAATTATTCACTGTATC  300

seq1  TTTTCTGAGTAATGCAGCCATATATCACGGCTTCAGGGGGAATTCATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGAGTAATGCAGCCATATATCACGGCTTCAGGGGGAATTCATGCC  350

seq1  TAATGCAGGAAACCTGGTTTACTACACAAGAAGGAAAGATCAGTAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCAGGAAACCTGGTTTACTACACAAGAAGGAAAGATCAGTAAAGTA  400

seq1  AACTGAAGGAACAACATTTTTCTGATAATTTCCTGAAATCACTTAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGGAACAACATTTTTCTGATAATTTCCTGAAATCACTTAATTTT  450

seq1  TAAGCTATGTTACAAATAACTATCCTAATACCTACAGACATAATTAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTATGTTACAAATAACTATCCTAATACCTACAGACATAATTAGCTC  500

seq1  TCTCCCTCATCAAAAACCTTTATTTTCTACATTACTGAATTTCACAACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCATCAAAAACCTTTATTTTCTACATTACTGAATTTCACAACCA  550

seq1  CTCAAAATGTAAAGAACCAAAGAAAGTGGATTGACTGACATTAAGCAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATGTAAAGAACCAAAGAAAGTGGATTGACTGACATTAAGCAATG  600

seq1  GATACCTAAAATTTGTCATTATTCCAAGACTCAGAAAATATTGCATAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTAAAATTTGTCATTATTCCAAGACTCAGAAAATATTGCATAAAA  650

seq1  CAGGAAAACAGGATATAAACCCCAAATGAATAGCCTATCTACTGTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAACAGGATATAAACCCCAAATGAATAGCCTATCTACTGTGAGAA  700

seq1  GTGTCTTTTGTAAAGTATAGGTAAGCTACACACGTAGAATCTCAAAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTTGTAAAGTATAGGTAAGCTACACACGTAGAATCTCAAAAATC  750

seq1  TTTCACACATAAATAAAAAAGATCAATACTTTCAATGCCAAGGAGTATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACATAAATAAAAAAGATCAATACTTTCAATGCCAAGGAGTATAG  800

seq1  GTAACACAACTCAAGACCCCACTCTTAACTGAAAGTTCCAGGGAAATGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACAACTCAAGACCCCACTCTTAACTGAAAGTTCCAGGGAAATGAT  850

seq1  GGATGCAAAGAGAGGGACAATAAGGGACACAAACACTGATAGCATACAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAAAGAGAGGGACAATAAGGGACACAAACACTGATAGCATACAAG  900

seq1  GTATAAGTAGGTAAGATAAGGAATGTGAATATATA-TCCTGTATAAGTGA  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTATAAGTAGGTAAGATAAGGAATGTGAATATATATTCCTGTATAAGTGA  950

seq1  GAATCAATAATAGTGAAAAAGTCATTAGCATTTGATATTTAATGGACCAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAATAATAGTGAAAAAGTCATTAGCATTTGATATTTAATGGACCAC  1000

seq1  AAATGCCATTGGCAGAGTCTAGGAGGAAAAGGGAGGAAAATATTGTAAAT  1049
       ||||||||||||||||||||||||   || ||||| |||||||||||||
seq2  -AATGCCATTGGCAGAGTCTAGGAG---AAAGGAGG-AAATATTGTAAAT  1045

seq1  ACTTATATATAAAC-TTTTAAACTACATCAAAGAAGCTTAG-ATAT-ATG  1096
      || ||||||||||| |||||||||||||||||| ||||||| |||| |||
seq2  AC-TATATATAAACTTTTTAAACTACATCAAAG-AGCTTAGAATATAATG  1093

seq1  TGTGTACA-CACATACATAAA-TATATAAGTAATATTTATATACACACAT  1144
      |||||||| |||||||||||| ||||||||| ||||| ||||||| || |
seq2  TGTGTACACCACATACATAAATTATATAAGTTATATTCATATACATACGT  1143

seq1  ATATATATAT  1154
      ||||||||||
seq2  ATATATATAT  1153