BAC Information

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BAC

Clone NameB6Ng01-222B06
Chromosome7 (Build37)
Map Location 142,181,612 - 142,318,740
singlet/doubletdoublet
Overlap geneDock1
Upstream geneAdam12, A130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699, LOC668750, B830028B13Rik, EG668693
Downstream geneLOC100043254, Foxi2, Clrn3, Ptpre, Mki67, LOC668764
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222B06.bB6Ng01-222B06.g
ACCGA037200GA037201
length1,2261,199
definitionB6Ng01-222B06.b B6Ng01-222B06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,317,514 - 142,318,740)(142,181,612 - 142,182,826)
sequence
gaattcccacagagattccatctgatgagatagactcaggctcacactgt
gagtttgcaaagcctgaaaatgaacttctgacagggttccacaaggcctt
ctaaaagggaatgaatgtcacaggatgtgaaaatgtcacccaacttagaa
acaaaatccaaccatctctctctcttacacacacaaaaaggaaacacact
tcctaactcctatttacagctcacagacgatgtaggctgtgtgcattttg
gttttgattttttttactccccccccccccccccaagtttggcacaaggc
aaagtgtgaacttcatcaatgggatctcgttgtaaagaaggcaaaattca
attaaaaaccgttgcagggctccacacatcatcctggccgtaaattatac
atcgtcgttgttaatggccagcagggtctggacttgagagattgagagcc
acagtcacctggggaggactggcatccctactgtaaattctcccaatagt
gtggctgctattttcaactctcatcctccacagagaagcctggtaatttt
cagtgaagtacttggattaagggctttattgaaaattactaggcctcagc
caaacacaataagacagacaatttggaacagcttcagaaaagaacgctcg
cttcccagataaagcccgaatggaggcctttgcagggaaaggcccaggtg
ggggtaaaaatggaatgggaaaaaagtctgcagtaattgttgggctgtag
aaggaagaaatgttggagaatgaaaatgagagtgaatggaaatgacattt
tgtggagagaaaggaaaaagattaagatgccaactgctaggctgaaagtc
attcaaaacggtaaagaacggaagaaaagcaaaaatagaagagtgatttt
tgttataggagaacacagaaactaacaggtcatactttacaggtaaacgc
gcccaatacaaagggctagaacccctgttggccttgctggttgtcccagc
acaaggtagagatggaggcctttcttagattcgattccagcctcagccca
ggcctcttgttaaagcttcccgcaaccaggcacagcctgtgaccttgaaa
ttgagccttcctcttagtctgccagcacaccctgctcctaggtcacctgc
ctgggtatgctgtggcctggacttaccaattagccactcaagtcccaaca
gtccagccactctcaaggccttatta
gaattcccatccctcccactggacagtgcaccgagactgcctttctcccc
cccagctcttcccgagaagcagatctcacagtgggattggcccatagtga
ttgcctctgaattggccaaggaagacatgggtagattttgagaaataaaa
ttcccctctctttgccacagcccaagaagagggactgtgcacacatctgc
ctgataataaagacaactgaattccaagaatgctacagaagtgattggca
tttcattcttgtctttaatttttgtgaacttaattaaggaaaaagcattt
aaagcttggtttcttttattctgggaaaccttttgtcaagatgtacttaa
tcatttaatatagttaaagaagaaaacaatctactgtgtcccttaaaaca
aacaaattctgaggtcagaagtgacccaggcacactctgattggccttga
gcactatggagcagaattgggacttctgcccaaatatcatgcctttccct
gatggttgcagagctagctccgtagttaatgtcagttctttccaagaaga
ttgccccttccctacctaattctacctttctatccacctacaggggaact
ttgtggcttgcatgacagccattttacggcagatggaagactaccattat
gcacacctgatcaagacctttgggaaaatgaggacagatgtcgtggtgag
tgtcttttccatcctgtcacaaggccaacattggaagcagtcagtgacat
ctgtatttccatttaaaatagatttctgcataagaaattctctatttgat
atcagaagccactcaagacactgtgtggatgcttttgactagcactaacc
tggagaataacttgggtctgagcctggagaaatcccatctgttatggtca
cagcagcctttcacttgctactgggtcaataacaatcatgtgccccacag
tcattagctcctgtcatttcttggttgactttctataacagtagcttgtg
agctaccctcctggacttaagctatctctgctattattagtgctaaccat
agaccctcatcagcatttctcctatacctccttagtctctcaacaaacat
gatgcacttattgggagagtgtataggaaacttattgctaggactacttc
ctatggctgaagtaactggcatatgtggcgaatatctctttgccaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_142317514_142318740
seq2: B6Ng01-222B06.b_46_1271 (reverse)

seq1  TAATAAAGCCTT--GAGTGGCTGCACTGTTGGGACTTGGAGT-GCTAATA  47
      |||||| |||||  ||||||||| ||||||||||||| |||| |||||| 
seq2  TAATAAGGCCTTGAGAGTGGCTGGACTGTTGGGACTT-GAGTGGCTAAT-  48

seq1  TGGGGAAAGTCAGGCCCACAGCAT-CCCAGGCAGTGTGACTTA-GAGCAG  95
         || |||||  | ||||||||| ||||||||| ||||| || ||||||
seq2  --TGGTAAGTCCAGGCCACAGCATACCCAGGCAG-GTGACCTAGGAGCAG  95

seq1  GGTGTTGCTGGCAGACTAAGAGGAAGGCTCAATTCTCAGGTCCACA-GCT  144
      |||| ||||||||||||||||||||||||||||| ||| |  |||| |||
seq2  GGTG-TGCTGGCAGACTAAGAGGAAGGCTCAATT-TCAAGGTCACAGGCT  143

seq1  GTGCCTGGTTGCCGGGAAGCTTTAACAAGAGGGCCTGGGCTGAGGCTGGA  194
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  GTGCCTGGTTG-CGGGAAGCTTTAACAAGA-GGCCTGGGCTGAGGCTGGA  191

seq1  ATCGAATCTAAGAAA-GCCTCCATCTCTACCTTGTGCTGTGAC-ACCAGC  242
      ||||||||||||||| ||||||||||||||||||||||| ||| ||||||
seq2  ATCGAATCTAAGAAAGGCCTCCATCTCTACCTTGTGCTGGGACAACCAGC  241

seq1  AAGGCCAACAGGGGTTCTAGCCCTTTGTATTGGGCGCGTTTACCTGTAAA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAACAGGGGTTCTAGCCCTTTGTATTGGGCGCGTTTACCTGTAAA  291

seq1  GTATGACCTGTTAGTTTTCTGTGTTTCTCCTATA--CAAAATCACTCTTC  340
      |||||||||||||| |||||||| ||||||||||   |||||||||||||
seq2  GTATGACCTGTTAG-TTTCTGTG-TTCTCCTATAACAAAAATCACTCTTC  339

seq1  TATTTTTGCTTTTCTTCCGTTCTTTACCGTTTTGAATGACTTTCAGCCTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGCTTTTCTTCCGTTCTTTACCGTTTTGAATGACTTTCAGCCTA  389

seq1  GCAGTTGGCATCTTAATCTTTTTCCTTTCTCTCCACAAAATGTCATTTCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGGCATCTTAATCTTTTTCCTTTCTCTCCACAAAATGTCATTTCC  439

seq1  ATTCACTCTCATTTTCATTCTCCAACATTTCTTCCTTCTACAGCCCAACA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTCTCATTTTCATTCTCCAACATTTCTTCCTTCTACAGCCCAACA  489

seq1  ATTACTGCAGACTTTTTTCCCATTCCATTTTTACCCCCACCTGGGCCTTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGCAGACTTTTTTCCCATTCCATTTTTACCCCCACCTGGGCCTTT  539

seq1  CCCTGCAAAGGCCTCCATTCGGGCTTTATCTGGGAAGCGAGCGTTCTTTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAAAGGCCTCCATTCGGGCTTTATCTGGGAAGCGAGCGTTCTTTT  589

seq1  CTGAAGCTGTTCCAAATTGTCTGTCTTATTGTGTTTGGCTGAGGCCTAGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCTGTTCCAAATTGTCTGTCTTATTGTGTTTGGCTGAGGCCTAGT  639

seq1  AATTTTCAATAAAGCCCTTAATCCAAGTACTTCACTGAAAATTACCAGGC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCAATAAAGCCCTTAATCCAAGTACTTCACTGAAAATTACCAGGC  689

seq1  TTCTCTGTGGAGGATGAGAGTTGAAAATAGCAGCCACACTATTGGGAGAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGGAGGATGAGAGTTGAAAATAGCAGCCACACTATTGGGAGAA  739

seq1  TTTACAGTAGGGATGCCAGTCCTCCCCAGGTGACTGTGGCTCTCAATCTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTAGGGATGCCAGTCCTCCCCAGGTGACTGTGGCTCTCAATCTC  789

seq1  TCAAGTCCAGACCCTGCTGGCCATTAACAACGACGATGTATAATTTACGG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCCAGACCCTGCTGGCCATTAACAACGACGATGTATAATTTACGG  839

seq1  CCAGGATGATGTGTGGAGCCCTGCAACGGTTTTTAATTGAATTTTGCCTT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATGATGTGTGGAGCCCTGCAACGGTTTTTAATTGAATTTTGCCTT  889

seq1  CTTTACAACGAGATCCCATTGATGAAGTTCACACTTTGCCTTGTGCCAAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAACGAGATCCCATTGATGAAGTTCACACTTTGCCTTGTGCCAAA  939

seq1  CTTGGGGGGGGGGGGGGGGAGTAAAAAAAATCAAAACCAAAATGCACACA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGGGGGGGGGGGGGAGTAAAAAAAATCAAAACCAAAATGCACACA  989

seq1  GCCTACATCGTCTGTGAGCTGTAAATAGGAGTTAGGAAGTGTGTTTCCTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACATCGTCTGTGAGCTGTAAATAGGAGTTAGGAAGTGTGTTTCCTT  1039

seq1  TTTGTGTGTGTAAGAGAGAGAGATGGTTGGATTTTGTTTCTAAGTTGGGT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGTGTAAGAGAGAGAGATGGTTGGATTTTGTTTCTAAGTTGGGT  1089

seq1  GACATTTTCACATCCTGTGACATTCATTCCCTTTTAGAAGGCCTTGTGGA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTCACATCCTGTGACATTCATTCCCTTTTAGAAGGCCTTGTGGA  1139

seq1  ACCCTGTCAGAAGTTCATTTTCAGGCTTTGCAAACTCACAGTGTGAGCCT  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCAGAAGTTCATTTTCAGGCTTTGCAAACTCACAGTGTGAGCCT  1189

seq1  GAGTCTATCTCATCAGATGGAATCTCTGTGGGAATTC  1227
      |||||||||||||||||||||||||||||||||||||
seq2  GAGTCTATCTCATCAGATGGAATCTCTGTGGGAATTC  1226

seq1: chr7_142181612_142182826
seq2: B6Ng01-222B06.g_67_1265

seq1  GAATTCCCATCCCTCCCACTGGACAGTGCACCGAGACTGCCTTTCTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATCCCTCCCACTGGACAGTGCACCGAGACTGCCTTTCTCCCC  50

seq1  CCCAGCTCTTCCCGAGAAGCAGATCTCACAGTGGGATTGGCCCATAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTCTTCCCGAGAAGCAGATCTCACAGTGGGATTGGCCCATAGTGA  100

seq1  TTGCCTCTGAATTGGCCAAGGAAGACATGGGTAGATTTTGAGAAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTGAATTGGCCAAGGAAGACATGGGTAGATTTTGAGAAATAAAA  150

seq1  TTCCCCTCTCTTTGCCACAGCCCAAGAAGAGGGACTGTGCACACATCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCTCTTTGCCACAGCCCAAGAAGAGGGACTGTGCACACATCTGC  200

seq1  CTGATAATAAAGACAACTGAATTCCAAGAATGCTACAGAAGTGATTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAATAAAGACAACTGAATTCCAAGAATGCTACAGAAGTGATTGGCA  250

seq1  TTTCATTCTTGTCTTTAATTTTTGTGAACTTAATTAAGGAAAAAGCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCTTGTCTTTAATTTTTGTGAACTTAATTAAGGAAAAAGCATTT  300

seq1  AAAGCTTGGTTTCTTTTATTCTGGGAAACCTTTTGTCAAGATGTACTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTGGTTTCTTTTATTCTGGGAAACCTTTTGTCAAGATGTACTTAA  350

seq1  TCATTTAATATAGTTAAAGAAGAAAACAATCTACTGTGTCCCTTAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAATATAGTTAAAGAAGAAAACAATCTACTGTGTCCCTTAAAACA  400

seq1  AACAAATTCTGAGGTCAGAAGTGACCCAGGCACACTCTGATTGGCCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTCTGAGGTCAGAAGTGACCCAGGCACACTCTGATTGGCCTTGA  450

seq1  GCACTATGGAGCAGAATTGGGACTTCTGCCCAAATATCATGCCTTTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATGGAGCAGAATTGGGACTTCTGCCCAAATATCATGCCTTTCCCT  500

seq1  GATGGTTGCAGAGCTAGCTCCGTAGTTAATGTCAGTTCTTTCCAAGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGCAGAGCTAGCTCCGTAGTTAATGTCAGTTCTTTCCAAGAAGA  550

seq1  TTGCCCCTTCCCTACCTAATTCTACCTTTCTATCCACCTACAGGGGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCTTCCCTACCTAATTCTACCTTTCTATCCACCTACAGGGGAACT  600

seq1  TTGTGGCTTGCATGACAGCCATTTTACGGCAGATGGAAGACTACCATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCTTGCATGACAGCCATTTTACGGCAGATGGAAGACTACCATTAT  650

seq1  GCACACCTGATCAAGACCTTTGGGAAAATGAGGACAGATGTCGTGGTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCTGATCAAGACCTTTGGGAAAATGAGGACAGATGTCGTGGTGAG  700

seq1  TGTCTTTTCCATCCTGTCACAAGGCCAACATTGGAAGCAGTCAGTGACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTCCATCCTGTCACAAGGCCAACATTGGAAGCAGTCAGTGACAT  750

seq1  CTGTATTTCCATTTAAAATAGATTTCTGCATAAGAAATTCTCTATTTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTCCATTTAAAATAGATTTCTGCATAAGAAATTCTCTATTTGAT  800

seq1  ATCAGAAGCCACTCAAGACACTGTGTGGATGCTTTTGACTAGCACTAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGCCACTCAAGACACTGTGTGGATGCTTTTGACTAGCACTAACC  850

seq1  TGGAGAATAACTTGGGTCTGAGCCTGGAGAAATCCCATCTGTTATGGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATAACTTGGGTCTGAGCCTGGAGAAATCCCATCTGTTATGGTCA  900

seq1  CAGCAGCCTTTCACTTGCTACTGGGTCAATAACAATCATGTGCCCCACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCTTTCACTTGCTACTGGGTCAATAACAATCATGTGCCCCACAG  950

seq1  TCATTAGCTCCTGTCATTTCTTGGTTGACTTTCTATAACAGTAGCTTGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGCTCCTGTCATTTCTTGGTTGACTTTCTATAACAGTAGCTTGTG  1000

seq1  AGCTACCCTCCTGGACCTTAAGCTATCTTCTGCTATTAATTAGTGCTAAC  1050
      ||||||||||||||| ||||||||||| ||||||||| ||||||||||||
seq2  AGCTACCCTCCTGGA-CTTAAGCTATC-TCTGCTATT-ATTAGTGCTAAC  1047

seq1  CATAGACCCTCATCAGCATTTCTCCTAATAACTCCTTAGTCCTCCTCACA  1100
      |||||||||||||||||||||||||| ||| ||||||||||   |||| |
seq2  CATAGACCCTCATCAGCATTTCTCCT-ATACCTCCTTAGTC--TCTCA-A  1093

seq1  CAAACAATGATGCAACTTAATTGGGAGAGTGTAATAGGGAAATTTATTGC  1150
      ||||| ||||||| |||| ||||||||||||| ||| ||||| |||||||
seq2  CAAAC-ATGATGC-ACTT-ATTGGGAGAGTGT-ATA-GGAAACTTATTGC  1138

seq1  TTAGGAGCTACCTCCCTAATGGCCTGAAATTACACTGCCATA--TGGCGA  1198
       ||||| |||| |||   |||| ||||| |   |||| ||||  ||||||
seq2  -TAGGA-CTACTTCC--TATGG-CTGAAGT--AACTGGCATATGTGGCGA  1181

seq1  ATATC-CTTTGCAAAGCT  1215
      ||||| |||||| |||||
seq2  ATATCTCTTTGCCAAGCT  1199