BAC Information

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BAC

Clone NameB6Ng01-222D13
Chromosome7 (Build37)
Map Location 107,027,695 - 107,180,826
singlet/doubletdoublet
Overlap geneXrra1, EG330602, Chrdl2
Upstream geneUvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2
Downstream genePold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222D13.bB6Ng01-222D13.g
ACCGA037302GA037303
length198447
definitionB6Ng01-222D13.b B6Ng01-222D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,180,629 - 107,180,826)(107,027,695 - 107,028,147)
sequence
tggagatcttaagtttttgagttcagagcatgaagcatgtatgataaatg
attcccatgtatgtatgtatgtatgtatgtatgcatgcatgcatgtatat
gaatgaactaatgtatttatgaataatgtatgtatatgtgtatgtattaa
tgggtggatggatggttatatgaacaaatgggtgtgggggcggatgga
tcttaacctccaaaccatctctccaaccttatggttagagatctgaggtc
tgcaacataaagcatcgcccacagctggaagctcagtgaatgatcattag
catcttcctctgtaagcctttccaagctcaagatcctctcttattctctt
tctctccccccccccccgtttccatgtagatgtctttcacacatttccag
ttctaaaggaactggagcttgcgttcaatggcatcaagatggtctacgtg
aaatatggagacttcaagacattggaagtaagttggaggtaggaagtttt
tgatcctacctgttcccctgtaagaatgagtataggcatctcgacagatt
atgactttggacaaaggttctctgggccttcactgctaggctcttgcttc
ttgcttctggcctctggagaagatggtggtgatggtggtggtggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107180629_107180826
seq2: B6Ng01-222D13.b_49_246 (reverse)

seq1  TCCATCCACCCCCACACCCATTTGTTCATATAACCATCCATCCACCCATT  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCGCCCCCACACCCATTTGTTCATATAACCATCCATCCACCCATT  50

seq1  AATACATACACATATACATACATTATTCATAAATACATTAGTTCATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATACACATATACATACATTATTCATAAATACATTAGTTCATTCAT  100

seq1  ATACATGCATGCATGCATACATACATACATACATACATACATGGGAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGCATGCATGCATACATACATACATACATACATACATGGGAATCA  150

seq1  TTTATCATACATGCTTCATGCTCTGAACTCAAAAACTTAAGATCTCCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATACATGCTTCATGCTCTGAACTCAAAAACTTAAGATCTCCA  198

seq1: chr7_107027695_107028147
seq2: B6Ng01-222D13.g_67_519

seq1  GAATTCTCTTAACCTCCAAACCATCTCTCCAACCTTATGGTTAGAGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAACCTCCAAACCATCTCTCCAACCTTATGGTTAGAGATCT  50

seq1  GAGGTCTGCAACATAAAGCATCGCCCACAGCTGGAAGCTCAGTGAATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTGCAACATAAAGCATCGCCCACAGCTGGAAGCTCAGTGAATGAT  100

seq1  CATTAGCATCTTCCTCTGTAAGCCTTTCCAAGCTCAAGATCCTCTCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCATCTTCCTCTGTAAGCCTTTCCAAGCTCAAGATCCTCTCTTAT  150

seq1  TCTCTTTCTCTCCCCCCCCCCCCGTTTCCATGTAGATGTCTTTCACACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTCTCCCCCCCCCCCCGTTTCCATGTAGATGTCTTTCACACAT  200

seq1  TTCCAGTTCTAAAGGAACTGGAGCTTGCGTTCAATGGCATCAAGATGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTCTAAAGGAACTGGAGCTTGCGTTCAATGGCATCAAGATGGTC  250

seq1  TACGTGAAATATGGAGACTTCAAGACATTGGAAGTAAGTTGGAGGTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGAAATATGGAGACTTCAAGACATTGGAAGTAAGTTGGAGGTAGGA  300

seq1  AGTTTTTGATCCTACCTGTTCCCCTGTAAGAATGAGTATAGGCATCTCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGATCCTACCTGTTCCCCTGTAAGAATGAGTATAGGCATCTCGA  350

seq1  CAGATTATGACTTTGGACAAAGGTTCTCTGGGCCTTCACTGCTAGGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATGACTTTGGACAAAGGTTCTCTGGGCCTTCACTGCTAGGCTCT  400

seq1  TGCTTCTTGCTTCTGGCCTCTGGAGAAGATGGTGGTGATGGTGGTGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTGCTTCTGGCCTCTGGAGAAGATGGTGGTGATGGTGGTGGTGG  450

seq1  TGA  453
      |||
seq2  TGA  453