BAC Information

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BAC

Clone NameB6Ng01-222I06
Chromosome7 (Build37)
Map Location 10,741,790 - 10,742,970
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921
Downstream geneVmn2r52, LOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10, Zik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1, LOC635187, LOC100042997, LOC100042293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222I06.bB6Ng01-222I06.g
ACCGA037511GA037512
length1,0961,157
definitionB6Ng01-222I06.b B6Ng01-222I06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgacctttccaagaattttatcatgaatgggtgttggattttg
tcaagtgctttctcagcatttaatgagattatcatgtggtttttgtcttt
gagtttggttatataatggattacattgatggatttccatatattgaaac
atccctgcatccctgggatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattctgatagcaagaactttattgaggatttttgc
attgatattcataagggaaattggtctgatgttctctatctttgttgggt
ctttctgtggtttcagtatcagagtaattgtggcttcatagaatgagttg
ggtagaatacctcctgattctattttgtggaatagtttgtgaagaactgg
gattagatcttctttgaaggtctgatagatctcttcactaaacccatctg
gtcctgggctttttttttttttttttttggttgggagactattaatgact
gcttctatttctttaggggatataggactgtttatatcattaacgtgatc
ttgatttaactttggtacctggtatctgtctagaaacttgtccatttcat
ccaggttcttcagttttgttgagtatagccttttgtagtaggatctgatg
ctattttagatttctttaggttctgttgttatgtctcccttttttatttc
tgattttgttaattagcattctgtccctgtgccctctagtgagtctggct
aaggttttatctatcttgttaattttctcaaagaaccagctccttctttg
gttgattctttgaatagttcttgtttccatttggttgatttcacccctga
gtgcgatcatttcctgccttctactcctcttgagtgaatttgcttccttt
tgttctagagcttttaggtgtgttgtcaagctgctaggggtatgttcact
ctagtttctttttggagtcactcagagctatgagtttactctttagaaat
gcctaattgggtcccataagtttggtatgttgtgctcattcatttaactc
tcaaaagtcctattctatctttatccttccttgcacaagtgtatca
gaattccaaggatctagcaggtactcagtctcacacagcaagcaggtgaa
ggagcaagagctagactcccttcttccaatgtccttatattgtctccagc
agaaggtgtagcccagattaaagatgtgttccaccacacctttaatccca
gatgaaaggtgtagcccagattaaaggtgtgttccttaaactcggagatt
caatcttctggaatccatagccactttggctcatgatctccaaaccaaga
tccagataaggatctccaagcctccagataagggtcactggtgagccttc
caattctggattgtagttcattccaaatatagtcaagttgacaaccagga
atagccactacagggggtgaattgggaagaagataatgactggactataa
aaaattattaaagataaaaaagaaaaattaaaataattgtgtagatatgt
caaaagtatagatatggaaggaatatgtaaaactagtgatatttgcataa
aactaatttttctcagagactgcactcagtttgcagttgtgattgagttt
ctggaggaagataatctcaaagggtggcatgggagcctgaggctttgact
atgctgcttcctagaaagtgcaatttccaaaaagacaattgagtgtttgc
aactagaataaatccttcacatttctcaattctccttccaaaataggatg
ctgaatgggtaaaaaatgcatcagcattaataaaaactatcacttccgga
agttactcttcatagaaatatgatcatagcaatgtccctttaaggaacac
attaagcattaacatccacattttactcattataaattcattgaagatgt
tatttttgcagcaaagatgtgatactcaactgcagtttatgggaattcta
ctcaaatttattataacactcaatctcctctaaaactacatttctattat
attcccaatcttgaattttaataatatttactcattttttacatttaagt
atatgtccctatatatatatttcctgtcaccatgtaagtgagcagcccgg
ggagaaaagaaaatggcaaagatcatgactgtactagtagatgcttgaat
cagctcgactctataaataatgatggacatgattcctgtaacttgaaagc
ctactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_10741790_10742970
seq2: B6Ng01-222I06.g_64_1220 (reverse)

seq1  TTAGTAGGCTTTTCTAATGTTACAAGAAATCATTTGTCCACTTCATTAAT  50
      |||||||||||   | | ||||| || |||||  ||||||  ||||||  
seq2  TTAGTAGGCTT---TCAAGTTAC-AGGAATCA--TGTCCA--TCATTA--  40

seq1  TTAATAGAGGTCTGGAACCTTGATTTCCAGCATCTAACTAGTACAGTTCA  100
      || ||||||   | || |  ||| ||| ||||||| |||||||||| |||
seq2  TTTATAGAG---TCGAGC--TGA-TTCAAGCATCT-ACTAGTACAG-TCA  82

seq1  ATTGATCTTTTGCCATTTTCTTTTCTCCCCGGGCTGCTCCACTTACATGG  150
        ||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  --TGATC-TTTGCCATTTTCTTTTCTCCCCGGGCTGCT-CACTTACATGG  128

seq1  TGACCAGGAAATATAATATATAGGGACATATACTTAAATGTAAAAAATGA  200
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGA-CAGGAAATAT-ATATATAGGGACATATACTTAAATGTAAAAAATGA  176

seq1  GTAAATATTATTAAAATTCAAGATT-GGAATATAATAGAAATGTAGTTTT  249
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTAAATATTATTAAAATTCAAGATTGGGAATATAATAGAAATGTAGTTTT  226

seq1  AGAGGAGATTGAGTGTTATAATAAATTTGAGTAGAATTCCCATAAACTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATTGAGTGTTATAATAAATTTGAGTAGAATTCCCATAAACTGC  276

seq1  AGTTGAGTATCACATCTTTTGCTGCAAAAATAACATCTTCAATGAATTTA  349
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTGAGTATCACATC-TTTGCTGCAAAAATAACATCTTCAATGAATTTA  325

seq1  TAATGAGTAAAATGTGGATGTTAATGCTTAATGTGTTCCTTAAAGGGACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTAAAATGTGGATGTTAATGCTTAATGTGTTCCTTAAAGGGACA  375

seq1  TTGCTATGATCATATTTCTATGAAGAGTAACTTCCGGAAGTGATAGTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATGATCATATTTCTATGAAGAGTAACTTCCGGAAGTGATAGTTTT  425

seq1  TATTAATGCTGATGCATTTTTTACCCATTCAGCATCCTATTTTGGAAGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGCTGATGCATTTTTTACCCATTCAGCATCCTATTTTGGAAGGA  475

seq1  GAATTGAGAAATGTGAAGGATTTATTCTAGTTGCAAACACTCAATTGTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAGAAATGTGAAGGATTTATTCTAGTTGCAAACACTCAATTGTCT  525

seq1  TTTTGGAAATTGCACTTTCTAGGAAGCAGCATAGTCAAAGCCTCAGGCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAAATTGCACTTTCTAGGAAGCAGCATAGTCAAAGCCTCAGGCTC  575

seq1  CCATGCCACCCTTTGAGATTATCTTCCTCCAGAAACTCAATCACAACTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCACCCTTTGAGATTATCTTCCTCCAGAAACTCAATCACAACTGC  625

seq1  AAACTGAGTGCAGTCTCTGAGAAAAATTAGTTTTATGCAAATATCACTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGTGCAGTCTCTGAGAAAAATTAGTTTTATGCAAATATCACTAG  675

seq1  TTTTACATATTCCTTCCATATCTATACTTTTGACATATCTACACAATTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATATTCCTTCCATATCTATACTTTTGACATATCTACACAATTAT  725

seq1  TTTAATTTTTCTTTTTTATCTTTAATAATTTTTTATAGTCCAGTCATTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTCTTTTTTATCTTTAATAATTTTTTATAGTCCAGTCATTAT  775

seq1  CTTCTTCCCAATTCACCCCCTGTAGTGGCTATTCCTGGTTGTCAACTTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCCAATTCACCCCCTGTAGTGGCTATTCCTGGTTGTCAACTTGA  825

seq1  CTATATTTGGAATGAACTACAATCCAGAATTGGAAGGCTCACCAGTGACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTGGAATGAACTACAATCCAGAATTGGAAGGCTCACCAGTGACC  875

seq1  CTTATCTGGAGGCTTGGAGATCCTTATCTGGATCTTGGTTTGGAGATCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGGAGGCTTGGAGATCCTTATCTGGATCTTGGTTTGGAGATCAT  925

seq1  GAGCCAAAGTGGCTATGGATTCCAGAAGATTGAATCTCCGAGTTTAAGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAAAGTGGCTATGGATTCCAGAAGATTGAATCTCCGAGTTTAAGGA  975

seq1  ACACACCTTTAATCTGGGCTACACCTTTCATCTGGGATTAAAGGTGTGGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTTTAATCTGGGCTACACCTTTCATCTGGGATTAAAGGTGTGGT  1025

seq1  GGAACACATCTTTAATCTGGGCTACACCTTCTGCTGGAGACAATATAAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACATCTTTAATCTGGGCTACACCTTCTGCTGGAGACAATATAAGG  1075

seq1  ACATTGGAAGAAGGGAGTCTAGCTCTTGCTCCTTCACCTGCTTGCTGTGT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGAAGAAGGGAGTCTAGCTCTTGCTCCTTCACCTGCTTGCTGTGT  1125

seq1  GAGACTGAGTACCTGCTAGATCCTTGGAATTC  1181
      ||||||||||||||||||||||||||||||||
seq2  GAGACTGAGTACCTGCTAGATCCTTGGAATTC  1157