BAC Information

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BAC

Clone NameB6Ng01-223K06
Chromosome7 (Build37)
Map Location 64,838,280 - 64,839,346
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040839, Gabrg3, Gabra5
Downstream geneGabrb3, EG668807, LOC434189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223K06.bB6Ng01-223K06.g
ACCGA038329GA038330
length6751,079
definitionB6Ng01-223K06.b B6Ng01-223K06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagagactttcaggacacaatggagatgacaatatctggaatac
ccaacagtagagagatagaacctgaagaaaccagctccagtagacagaca
tgattcccatttgagggatggggccacccacttatcacaaaatttttaac
tcagaattgttactgcctaaaggacacacagggacaaaaagtggagcaca
gactgagaaaaaggtcatccagagacttccccacattgggatccatccca
tctacagacaccaaaccctgacaccactgctgatgccaagaagtgcttgc
agactggagtctagtatagctgttctctgagaggctgccaggacctgact
aagacagatatagatactcacagccaacattggacttagccaggagagcc
caatggaagagttatgggaatgactgaaggagctaaaggggattgcaact
gcataggaagaacaacaatatcaactaacaggacccatcagagcttccag
gaattaaactaccaccaaagtatatacatgaaagggtccatggcgcctac
atatgtagcagaggactgccttatctggcatcaatgggatgagaggggct
tgttcctgcagaagcttgttgccccagagaagggcaatgctagagggacg
aggaggaagtgggtgggtgggtggg

gaattccgcagatgaactcagagaaggagaagagccactatatgaaggga
gtcttccatattacacctagcccagatgctatccagtcatggcagacttt
ggccttaattagcagttttttgacaaataatcagctttaaaaattgtata
gacaaatgaagtagataagaaactggatgagaaaatcagcaacaagcacg
ggaaattaaggaaggaatctgtatttaaaaaaagaaagcaaaacaaatag
aaaagttggaaacagagatataaattaaaataaaaaccgtggaacacatt
cctattcattagaacaacatcacctcccacagaagatccagtgataaagg
ataaaatttttaaaaatgctatattacattctaatatcaacaaagacaat
tttagcatgatcacaactttcaagaacactatgaaacagtcaagtgacag
cccacatgaatttgtaacggtagccagggtgtggtgggattatgttgtga
tctcagctcctgggatggctgaggtaagaggatatcaagtttgtcgtcat
cctagactacatagtgaaaagctgtcattcatatatatataatctcaggt
gcctattatatatacatatgcacatacatatatacacacatatacatata
tatatatttatacatatatacaaatgtacacacacacatatatacatatg
tacatatgtgtatatttatgtacatatgtgtatatctatgtatatgtgtg
tgcatttgtatatatgtgcatatatatatgtatgtgcatatgtatatata
taatagacacctgagattaaagacttacatcatagaaagtctatttcaat
aaaattatgtcagaatactctctcatcacagggaaataaatggacattca
gaacaagatgaagaagcattttagaaaccccaatagacataatcagagaa
gaaccattttttgtgaacacatctatagtcaaggaatgacaaaaatgtat
ccttatgcaacaggaaaaacattattacaaggctataggataaaaatctc
attcttcctattaaaaaatacatatcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64838280_64839346
seq2: B6Ng01-223K06.g_67_1145

seq1  GAATTCCGCAGATGAACTCAGAGAAGGAGAAGAGCCACTATATGAAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGCAGATGAACTCAGAGAAGGAGAAGAGCCACTATATGAAGGGA  50

seq1  GTCTTCCATATTACACCTAGCCCAGATGCTATCCAGTCATGGCAGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCATATTACACCTAGCCCAGATGCTATCCAGTCATGGCAGACTTT  100

seq1  GGCCTTAATTAGCAGTTTTTTGACAAATAATCAGCTTTAAAAATTGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTAATTAGCAGTTTTTTGACAAATAATCAGCTTTAAAAATTGTATA  150

seq1  GACAAATGAAGTAGATAAGAAACTGGATGAGAAAATCAGCAACAAGCACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATGAAGTAGATAAGAAACTGGATGAGAAAATCAGCAACAAGCACG  200

seq1  GGAAATTAAGGAAGGAATCTGTATTTAAAAAAAGAAAGCAAAACAAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTAAGGAAGGAATCTGTATTTAAAAAAAGAAAGCAAAACAAATAG  250

seq1  AAAAGTTGGAAACAGAGATATAAATTAAAATAAAAACCGTGGAACACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGGAAACAGAGATATAAATTAAAATAAAAACCGTGGAACACATT  300

seq1  CCTATTCATTAGAACAACATCACCTCCCACAGAAGATCCAGTGATAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCATTAGAACAACATCACCTCCCACAGAAGATCCAGTGATAAAGG  350

seq1  ATAAAATTTTTAAAAATGCTATATTACATTCTAATATCAACAAAGACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTTTTAAAAATGCTATATTACATTCTAATATCAACAAAGACAAT  400

seq1  TTTAGCATGATCACAACTTTCAAGAACACTATGAAACAGTCAAGTGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCATGATCACAACTTTCAAGAACACTATGAAACAGTCAAGTGACAG  450

seq1  CCCACATGAATTTGTAACGGTAGCCAGGGTGTGGTGGGATTATGTTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATGAATTTGTAACGGTAGCCAGGGTGTGGTGGGATTATGTTGTGA  500

seq1  TCTCAGCTCCTGGGATGGCTGAGGTAAGAGGATATCAAGTTTGTCGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTCCTGGGATGGCTGAGGTAAGAGGATATCAAGTTTGTCGTCAT  550

seq1  CCTAGACTACATAGTGAAAAGCTGTCATTCATATATATATAATCTCAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACTACATAGTGAAAAGCTGTCATTCATATATATATAATCTCAGGT  600

seq1  GCCTATTATATATACATATGCACATACATATATACACACATATACATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTATATATACATATGCACATACATATATACACACATATACATATA  650

seq1  TATATATTTATACATATATACAAATGTACACACACACATATATACATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTATACATATATACAAATGTACACACACACATATATACATATG  700

seq1  TACATATGTGTATATTTATGTACATATGTGTATATCTATGTATATGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGTGTATATTTATGTACATATGTGTATATCTATGTATATGTGTG  750

seq1  TGCATTTGTATATATGTGCATATATATATGTATGTGCATATGTATATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGTATATATGTGCATATATATATGTATGTGCATATGTATATATA  800

seq1  TAATAGACACCTGAGATTAAAGACTAACATCATAGAAAGTCTA-TTCAAT  849
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  TAATAGACACCTGAGATTAAAGACTTACATCATAGAAAGTCTATTTCAAT  850

seq1  AAAATTATGTCAGAATACTCTCTCATCACA-GGAAATAAATGGACATTCA  898
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAAATTATGTCAGAATACTCTCTCATCACAGGGAAATAAATGGACATTCA  900

seq1  GAACAAGATGAAGAAGCA-TTTAGAACCCCAAATAGACATAATCAGAGAA  947
      |||||||||||||||||| ||||||| ||| |||||||||||||||||||
seq2  GAACAAGATGAAGAAGCATTTTAGAAACCCCAATAGACATAATCAGAGAA  950

seq1  GAACCATTTTGTG---ACACATC-ATAGTCA--GGATGACAAAAATGTAT  991
      |||||||||| ||   ||||||| |||||||  | |||||||||||||||
seq2  GAACCATTTTTTGTGAACACATCTATAGTCAAGGAATGACAAAAATGTAT  1000

seq1  CC-TATGCAACAGG-AAAACAATATTACAA-GCTATAGGATAAAAATCTC  1038
      || ||||||||||| |||||| |||||||| |||||||||||||||||||
seq2  CCTTATGCAACAGGAAAAACATTATTACAAGGCTATAGGATAAAAATCTC  1050

seq1  AATCTACCTATTAAAATTAACATATCAGA  1067
      | ||| ||||||||||   ||||||||||
seq2  ATTCTTCCTATTAAAAAATACATATCAGA  1079


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