BAC Information

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BAC

Clone NameB6Ng01-223L06
Chromosome7 (Build37)
Map Location 67,184,310 - 67,185,241
singlet/doubletsinglet
Overlap geneSnrpn
Upstream geneLOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snurf
Downstream geneEG664849, LOC100041201, LOC100041211, LOC664896, LOC100041229
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223L06.bB6Ng01-223L06.g
ACCGA038367GA038368
length9831,002
definitionB6Ng01-223L06.b B6Ng01-223L06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttttatcataaagatatgacacaaaacatatacattaacata
tttttgactttccacaatgtcagaatttattgaagtgataaatttaaagt
ttgtcatcagtttttcaaagggatttttttccaagtagacccaaattctc
tttataacaggacaattaaatagacacattctttgttttagattttattt
attttttaagtttatgtattaatgtttgtctatatgtatgtctgttcagc
acttgtgcaccgagcctgaggctgttagaataattcttcagattcctggg
aaatggagtcacaggtttttgtagttatgtgagttctggaaactgaatat
aggtatttgggaagagtgctcagtgctcttaaataacgagtcatcaccca
gggcacaatacaggattttaaaatgccaatcttttttttttaattggata
ttttatttgtttacatttagaatgttatcccctttcccagtttcccctct
gtaaactccctattctatccctcttaccctacttctatgagggtgctcac
ccacccacccacccacttctgcctcaccgccctagcattcttctacactg
gggcatcaaaccttcacaggaccaagggccttccctcccattgatgacag
ataaggttccttcagctctgtaagtccttcccctaactcctccattgggg
tccctatgctcagatcaatagttggctgtgagcattcacatctgtatttt
tcaggctctggcagagcttctcaggagacagctgtatcaggctcctataa
gcaaacacttcttggcatcagcaatagtgtcttgtttggtgtctgcatgt
gatatggattcataggtggggcagtctctggatgtcctttcttcagtttc
tgctcactctttgtcactgtattgcctttcgacaaggaacaatcctgggt
taaaatttgagatggggcgagtgacaccaattc
gaattcctgatccttccaagacttttaacacaaaggggatgttgaatttt
gtcaaatgctttttgagcatctaatgaaatgtaggattttttccttgagt
ttgtttatgtagtgttttacattgatggatttctgtatattgaaccatct
ctgcatccctgggatgaagactgcttgattgccatgaatgatcattttga
tgtgtttttggattcagttggcatggattttattgagtatttttgcatcc
gtattcataagggaaatttgtctgaagttctctttctttgttgcatcttt
gtgtgcttttggtatcagcgtaattctggcttcatagaatgaattggata
gtgttccttctgtttctattttgtggaatagtgtttagagtattggtatt
aggtcttcttgaaagtctgatagaattctgcactaaaaccatctggtcct
tggctttttttggtagggagacttgtaatgacttcttctatttctttagg
ggtatgggacagcttagatggtttatctgatcctgatttacctttggtgt
ttagtctctgtctagaaaattgttcatttcatccagattttccagttgtg
ttgaatataggctattgtagcaggatctgaatatttttttttaatttcta
cacgttctgttgttgggtccccccctttcatttatgtttttgttatttgt
gtattttgtctgtgccctctggtaagtctggctaagtgttcatctgtcct
ttttatttttttcaaagaaccagctcctggtattgttgaatcgtcatgta
gttgtttttgtttgtttgtttgtttctagtttggttgattacagtccttg
agtttgggttgtttcctgctgtctactaattttgggtgtatttgattcct
ttttgttctagagctttcagatgaagtactactggggtaacctaattttt
tttttttttcatttggaagaatttgtgaaatggagatacttttcttggta
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67184310_67185241
seq2: B6Ng01-223L06.b_44_974

seq1  GAATTCCTTTTTATCATAAAGATATGACACAAAACATATACATTAACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTTATCATAAAGATATGACACAAAACATATACATTAACATA  50

seq1  TTTTTGACTTTCCACAATGTCAGAATTTATTGAAGTGATAAATTTAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGACTTTCCACAATGTCAGAATTTATTGAAGTGATAAATTTAAAGT  100

seq1  TTGTCATCAGTTTTTCAAAGGGATTTTTTTCCAAGTAGACCCAAATTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCAGTTTTTCAAAGGGATTTTTTTCCAAGTAGACCCAAATTCTC  150

seq1  TTTATAACAGGACAATTAAATAGACACATTCTTTGTTTTAGATTTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAACAGGACAATTAAATAGACACATTCTTTGTTTTAGATTTTATTT  200

seq1  ATTTTTTAAGTTTATGTATTAATGTTTGTCTATATGTATGTCTGTTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAGTTTATGTATTAATGTTTGTCTATATGTATGTCTGTTCAGC  250

seq1  ACTTGTGCACCGAGCCTGAGGCTGTTAGAATAATTCTTCAGATTCCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGCACCGAGCCTGAGGCTGTTAGAATAATTCTTCAGATTCCTGGG  300

seq1  AAATGGAGTCACAGGTTTTTGTAGTTATGTGAGTTCTGGAAACTGAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGTCACAGGTTTTTGTAGTTATGTGAGTTCTGGAAACTGAATAT  350

seq1  AGGTATTTGGGAAGAGTGCTCAGTGCTCTTAAATAACGAGTCATCACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTGGGAAGAGTGCTCAGTGCTCTTAAATAACGAGTCATCACCCA  400

seq1  GGGCACAATACAGGATTTTAAAATGCCAATCTTTTTTTTTTAATTGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACAATACAGGATTTTAAAATGCCAATCTTTTTTTTTTAATTGGATA  450

seq1  TTTTATTTGTTTACATTTAGAATGTTATCCCCTTTCCCAGTTTCCCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGTTTACATTTAGAATGTTATCCCCTTTCCCAGTTTCCCCTCT  500

seq1  GTAAACTCCCTATTCTATCCCTCTTACCCTACTTCTATGAGGGTGCTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTCCCTATTCTATCCCTCTTACCCTACTTCTATGAGGGTGCTCAC  550

seq1  CCACCCACCCACCCACTTCTGCCTCACCGCCCTAGCATTCTTCTACACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACCCACCCACTTCTGCCTCACCGCCCTAGCATTCTTCTACACTG  600

seq1  GGGCATCAAACCTTCACAGGACCAAGGGCCTTCCCTCCCATTGATGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCAAACCTTCACAGGACCAAGGGCCTTCCCTCCCATTGATGACAG  650

seq1  ATAAGGTTCCTTCAGCTCTGTAAGTCCTTCCCCTAACTCCTCCATTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTTCCTTCAGCTCTGTAAGTCCTTCCCCTAACTCCTCCATTGGGG  700

seq1  TCCCTATGCTCAGATCAATAGTTGGCTGTGAGCATTCACATCTGTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATGCTCAGATCAATAGTTGGCTGTGAGCATTCACATCTGTATTTT  750

seq1  TCAGGCTCTGGCAGAGCTTCTCAGGAGACAGCTGTATCAGGCTCCTATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTCTGGCAGAGCTTCTCAGGAGACAGCTGTATCAGGCTCCTATAA  800

seq1  GCAAACACTTCTTGGCATCAGCAATAGTGTCTTGTTTGGTGTCTGCATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACACTTCTTGGCATCAGCAATAGTGTCTTGTTTGGTGTCTGCATGT  850

seq1  GATATGGATTCATAGGTGGGGCAGTCTCTGGATGTCCTTTCTTCAGTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGATTCATAGGTGGGGCAGTCTCTGGATGTCCTTTCTTCAGTTTC  900

seq1  TGCTTCACTCTTTGTCACTGTATTGCCTTTCG  932
      ||| ||||||||||||||||||||||||||||
seq2  TGC-TCACTCTTTGTCACTGTATTGCCTTTCG  931