BAC Information

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BAC

Clone NameB6Ng01-223P12
Chromosome7 (Build37)
Map Location 63,145,851 - 63,146,868
singlet/doubletsinglet
Overlap geneCyfip1
Upstream geneLuzp2, LOC668796, Siglech, Tubgcp5
Downstream geneNipa2, Nipa1, LOC672959, Herc2, p, LOC100040839, Gabrg3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223P12.bB6Ng01-223P12.g
ACCGA038565GA038566
length1,0941,024
definitionB6Ng01-223P12.b B6Ng01-223P12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaaccagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactgataagtggatattagcccaaaacctaag
atacccaagatataagatacaatttcctaaacacatgaaactcaagaaaa
atgaagactgaagtgtgaacactatgcccctccttagaagtgggaacaaa
acacccttggaaggagttacagagacaaagtttggagctgagataaaagg
atggaccatgtagacactagcatatccggggatccatcccataatcagct
tccaaatgctgaaaccattgcatacactagcaagattatgctgaaaggac
cctgatatagctgtctcttgtcagagtatgcctgggcctagcaaaacata
gaagttggatgctcacagtaggctattggatggatcacatgggcccccaa
tgaaggagctagagaaagtaccaaagaacctaaagggatctgcaaccctt
atgatgggaacaaccattatgactaactagtgctccggagctcttgactt
ctatgtctgcatatgcatccaatagaatggccttagtcggccta
gaattcattaaaagcattttgctgtaacgttctaaagttcttgagagctg
aggcaaaaagttttttttatttattttgatcttagtttgctaatgttgac
ttccagataacacattacaaaatcacacagtcactgtatctctatataca
ggtatgtatagatgtaggttacagaatggcaaccatgaaggtaaaggagg
ctgcagccaagttcatgtaatttcaagaaaggaagcttgactggaggcaa
gcctaaggctgatagcaatgcaaagggctcaccatgggctcagacagtga
gctagaggcagttctgcagtttgtactgctgagtcacaggtttgagctga
gcctcagggttgaccagagctgtagaagcaaggatcaggaccatggagga
tgcagaacagaggacaggaaagtctagattgatgaagaggcagcagttcc
agatggacaaatatatagacaggcagatgagtaggctgtagtaaccatgg
agaccaagctgggctaaagccctgggacagctgagctttctgcctatctc
ttgacacacatactgagtagtcaggtgacaggtctaagcaggctatccca
tggtatagttatgtatctgtaggagcatggctctatagacttatatgcct
accaagtatctgagtccagaggcaaatgctgcttgtaaaatgaagtttat
tagggcaaggcacaacctgaaaaagcagtttctagcattgtgatgtgatt
tagatcagaccacagccagttctcaacaggtttggatttaagttatcccc
tgactaatgttgttgaacatcttttcacatattcattgggcggttataca
tctcttttatacaaaggtctattcatgggactgagcttatagctcaccac
aagagtatccagcatgtgtgaggtccatctcccaacactgtgtagtttaa
acaaaaataagaacaaccaaaactgaaaagggattattaggcatgtgcca
ccagtgcccagtgttcagaactcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_63145851_63146868
seq2: B6Ng01-223P12.g_66_1089

seq1  GAATTCATTAAAAGCATTTTGCTGTAACGTTCTAAAGTTCTTGAGAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAAAGCATTTTGCTGTAACGTTCTAAAGTTCTTGAGAGCTG  50

seq1  AGGCAAAAAGTTTTTTTTATTTATTTTGATCTTAGTTTGCTAATGTTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAAGTTTTTTTTATTTATTTTGATCTTAGTTTGCTAATGTTGAC  100

seq1  TTCCAGATAACACATTACAAAATCACACAGTCACTGTATCTCTATATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATAACACATTACAAAATCACACAGTCACTGTATCTCTATATACA  150

seq1  GGTATGTATAGATGTAGGTTACAGAATGGCAACCATGAAGGTAAAGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTATAGATGTAGGTTACAGAATGGCAACCATGAAGGTAAAGGAGG  200

seq1  CTGCAGCCAAGTTCATGTAATTTCAAGAAAGGAAGCTTGACTGGAGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCAAGTTCATGTAATTTCAAGAAAGGAAGCTTGACTGGAGGCAA  250

seq1  GCCTAAGGCTGATAGCAATGCAAAGGGCTCACCATGGGCTCAGACAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAGGCTGATAGCAATGCAAAGGGCTCACCATGGGCTCAGACAGTGA  300

seq1  GCTAGAGGCAGTTCTGCAGTTTGTACTGCTGAGTCACAGGTTTGAGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGGCAGTTCTGCAGTTTGTACTGCTGAGTCACAGGTTTGAGCTGA  350

seq1  GCCTCAGGGTTGACCAGAGCTGTAGAAGCAAGGATCAGGACCATGGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGGTTGACCAGAGCTGTAGAAGCAAGGATCAGGACCATGGAGGA  400

seq1  TGCAGAACAGAGGACAGGAAAGTCTAGATTGATGAAGAGGCAGCAGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAACAGAGGACAGGAAAGTCTAGATTGATGAAGAGGCAGCAGTTCC  450

seq1  AGATGGACAAATATATAGACAGGCAGATGAGTAGGCTGTAGTAACCATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGACAAATATATAGACAGGCAGATGAGTAGGCTGTAGTAACCATGG  500

seq1  AGACCAAGCTGGGCTAAAGCCCTGGGACAGCTGAGCTTTCTGCCTATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAGCTGGGCTAAAGCCCTGGGACAGCTGAGCTTTCTGCCTATCTC  550

seq1  TTGACACACATACTGAGTAGTCAGGTGACAGGTCTAAGCAGGCTATCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACACATACTGAGTAGTCAGGTGACAGGTCTAAGCAGGCTATCCCA  600

seq1  TGGTATAGTTATGTATCTGTAGGAGCATGGCTCTATAGACTTATATGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAGTTATGTATCTGTAGGAGCATGGCTCTATAGACTTATATGCCT  650

seq1  ACCAAGTATCTGAGTCCAGAGGCAAATGCTGCTTGTAAAATGAAGTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTATCTGAGTCCAGAGGCAAATGCTGCTTGTAAAATGAAGTTTAT  700

seq1  TAGGGCAAGGCACAACCTGAAAAAGCAGTTTCTAGCATTGTGATGTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCAAGGCACAACCTGAAAAAGCAGTTTCTAGCATTGTGATGTGATT  750

seq1  TAGATCAGACCACAGCCAGTTCTCAACAGGTTTGGATTTAAGTTATCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGACCACAGCCAGTTCTCAACAGGTTTGGATTTAAGTTATCCCC  800

seq1  TGACTAATGTTGTTGAACATCTTTTCACATATTCATTGGGCGGTTATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAATGTTGTTGAACATCTTTTCACATATTCATTGGGCGGTTATACA  850

seq1  TCTCTTTTATACAAAGGTCTATTCATGGGACTGAGCTTATAGCTCA-CAC  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTCTTTTATACAAAGGTCTATTCATGGGACTGAGCTTATAGCTCACCAC  900

seq1  AAGAGTATCCAGCATGTGTGAGGTCCATCT-CCAACACTGTGTAGTTAAA  948
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  AAGAGTATCCAGCATGTGTGAGGTCCATCTCCCAACACTGTGTAGTTTAA  950

seq1  AC-AAAATAAGAACAACCAAAACTG-AAAGGGATTA-TAGGCATGTGCCA  995
      || |||||||||||||||||||||| |||||||||| |||||||||||||
seq2  ACAAAAATAAGAACAACCAAAACTGAAAAGGGATTATTAGGCATGTGCCA  1000

seq1  CCAGTGCCCAGTGTTCAG-ACTCC  1018
      |||||||||||||||||| |||||
seq2  CCAGTGCCCAGTGTTCAGAACTCC  1024