BAC Information

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BAC

Clone NameB6Ng01-224D17
Chromosome7 (Build37)
Map Location 77,533,076 - 77,674,894
singlet/doubletdoublet
Overlap geneB130024G19Rik, LOC100042838, LOC665486, LOC100041957
Upstream geneEG665410, Nr2f2, LOC100042833
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224D17.bB6Ng01-224D17.g
ACCGA038751GA038752
length1,1871,070
definitionB6Ng01-224D17.b B6Ng01-224D17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,673,726 - 77,674,894)(77,533,076 - 77,534,139)
sequence
gaattcagagttgtaatataaaacagttatttggctataactaatcatac
taacatatgttagcatgtgttgccaatatacttcctaattaagaacaaca
taaaatcataggaaatcctgtatcctgtcttcatagattcttcatgtatc
tttaactccctggctttatttctgaagtataactacaaaaaaaaaaaaaa
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagagaaaagaaaaagacaaaaaggttgatt
ccaaaattccaaagttatgtctggccaaccatgaactgcaatgtcattaa
caagattaatgtgcattccagaagacaccaccaagcattttcctccttaa
acaaatgctgccattaaaaactaattttacaagaaaaaaaccttataagc
atccccctcaaaaaaaaaatgaaaggtcaatgtctctcattggtgaggta
gtatccataaccaatataaaactgaaataattagggaacacttttcttcc
tggcaaagcctgaaatgttggtcacctttgcatgtttgctcatattgttc
acaaatttcaggatgattgtcatatgaggcttgagtttttctcttaggct
ctccttaaagtcatgctaattcacctgagactgtttagagctgtagtcct
gacccatcatcccttcacaaatggacactgcataattattccacagataa
agtaggaggtgagacaactgatggaaactagaagctacctggtgcaaagg
tttggcgagctccttagcttttcattgctgtgacagacaccatgaccaaa
agcaacctggggaagaaaagagtgtatttttggctttcatatcacagtct
atcactgagggaattttgggagcagaaaacctcaaataggagcaggatcg
gggagacaagagcttgattacacagatcatggaagggatgctgcttattg
gcttgctccttcgtgacttgctcgctctgctcttagaacaactcaaggac
caccaggcccagaggtagcacggcctctgggcttgtgaagcagctctacc
acattcattattcattcaaagaaatgccaacatagttcttgcgatacgca
agtctggtgtgggcatttccttaatggacatttcctc
gaattccttgtgatactagagataggacctacagttctgcatgcttatgt
agcctgctgaccttgctttacctgtaaaccagataacctttaagtaatgt
ttttgcttgcatttaaggttctgtaacaatcaagaacacgtggacaccta
cctgtgggaggaggcttgggggaaacactgtttctggttgctgctgaagc
cagcattctggagatggacagctgctcaaggaaatgaagggagattttgt
aaattgcagattctaagcaggtaacttacatgtgtgaaggcctggaccaa
gtccgctagatagaggagaaggcaccgttcttaaaaaggcttgattaatg
acagctttgattgtgaatgggagcagaagtcatactgggttggattctgt
cctcagcggcatcatttttatcctatgagaaacttcagtacttaaagata
acagacacacttcctaacccagggcttttgttttactggatccgttttct
ggattcctacacaggacaagaactgttgcttccctgagttggcctgcttt
tccagagtatcttaaaaggtctcttgaaacaaataaaatactcagaactt
ctgggactgtcacagacagtgtcctgttactggctttaaacagtccctca
tgaggaagaagccctatatcctgaagtcagatgtcaatcatcctgggtat
gtacaggggatttaatgcttttaagaatgtttcatgtttatccccattaa
atttcagtttgctttggatttttgggagcttttgggatctatcactctca
acttttgttgctttatagactgactagcactaattttcccctccatagtt
ccactcaattactgaactaaattttgaccatttcagggattctggagttt
ctgatgttattatggggaaaaattagtgccattcttattctgtcagctcg
taagtcgtggataataagaatgtctccaaagtgagattagcttctctcaa
gtcctgggctgcctatatggccatgccacgtaggcattcttaaatttatt
ttgtgcctttttttcttacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77673726_77674894
seq2: B6Ng01-224D17.b_51_1237 (reverse)

seq1  GAGGAAATGTCAATTAAGAAAATGCCC-CACCAGACTGGCGTATTGGCAA  49
      ||||||||||| |||||| |||||||| ||||||||| ||||| | ||||
seq2  GAGGAAATGTCCATTAAGGAAATGCCCACACCAGACTTGCGTA-TCGCAA  49

seq1  G-ACTATGTT-GCATTTCTTTGATTG-ATAATTGATGTGGTAGAGCCTGC  96
      | |||||||| |||||||||||| || |||||  ||||||||||| ||||
seq2  GAACTATGTTGGCATTTCTTTGAATGAATAATGAATGTGGTAGAG-CTGC  98

seq1  -TCAACAGCCCAGAG--CGTGCTACCTCTGGG-CTGGTGGTCC-TGAGTT  141
       |||  |||||||||  ||||||||||||||| |||||||||| ||||||
seq2  TTCACAAGCCCAGAGGCCGTGCTACCTCTGGGCCTGGTGGTCCTTGAGTT  148

seq1  G-TCTAAGAAGGCAGAGCGAGCAAGTCACG-AGGAGCAAGCCAATAAGCA  189
      | |||||||  ||||||||||||||||||| |||||||||||||||||||
seq2  GTTCTAAGA--GCAGAGCGAGCAAGTCACGAAGGAGCAAGCCAATAAGCA  196

seq1  GCATCCC-TCCATGATCTGTGT-ATC-AGCTCTTGTCT-CCCGATCCTGC  235
      ||||||| |||||||||||||| ||| ||||||||||| |||||||||||
seq2  GCATCCCTTCCATGATCTGTGTAATCAAGCTCTTGTCTCCCCGATCCTGC  246

seq1  T-CTATTTGAG--TTTCTGCTCC--AAATTCCCTCAGTGATAGACTGTGA  280
      | |||||||||  ||||||||||  |||||||||||||||||||||||||
seq2  TCCTATTTGAGGTTTTCTGCTCCCAAAATTCCCTCAGTGATAGACTGTGA  296

seq1  TATGAAAGCC-AAAATACACTC-TTTCTTCCCCAGGTTGCTTTTGGTCAT  328
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  TATGAAAGCCAAAAATACACTCTTTTCTTCCCCAGGTTGCTTTTGGTCAT  346

seq1  GGTGTCTGTCACAGCAATGAAAAGCTAAGGAGCTCGCCAAACCTTTGCAC  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTGTCACAGCAATGAAAAGCTAAGGAGCTCGCCAAACCTTTGCAC  396

seq1  CAGGTAGCTTCTAGTTTCCATCAGTTGTCTCACCTCCTACTTTATCTGTG  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGCTTCTAGTTTCCATCAGTTGTCTCACCTCCTACTTTATCTGTG  446

seq1  GAATAATTATGCAGTGTCCATTTGTGAAGGGATGATGGGTCAGGACTACA  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTATGCAGTGTCCATTTGTGAAGGGATGATGGGTCAGGACTACA  496

seq1  GCTCTAAACAGTCTCAGGTGAATTAGCATGACTTTAAGGAGAGCCTAAGA  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAAACAGTCTCAGGTGAATTAGCATGACTTTAAGGAGAGCCTAAGA  546

seq1  GAAAAACTCAAGCCTCATATGACAATCATCCTGAAATTTGTGAACAATAT  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTCAAGCCTCATATGACAATCATCCTGAAATTTGTGAACAATAT  596

seq1  GAGCAAACATGCAAAGGTGACCAACATTTCAGGCTTTGCCAGGAAGAAAA  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAACATGCAAAGGTGACCAACATTTCAGGCTTTGCCAGGAAGAAAA  646

seq1  GTGTTCCCTAATTATTTCAGTTTTATATTGGTTATGGATACTACCTCACC  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCCTAATTATTTCAGTTTTATATTGGTTATGGATACTACCTCACC  696

seq1  AATGAGAGACATTGACCTTTCATTTTTTTTTTGAGGGGGATGCTTATAAG  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAGACATTGACCTTTCATTTTTTTTTTGAGGGGGATGCTTATAAG  746

seq1  GTTTTTTTCTTGTAAAATTAGTTTTTAATGGCAGCATTTGTTTAAGGAGG  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTCTTGTAAAATTAGTTTTTAATGGCAGCATTTGTTTAAGGAGG  796

seq1  AAAATGCTTGGTGGTGTCTTCTGGAATGCACATTAATCTTGTTAATGACA  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTTGGTGGTGTCTTCTGGAATGCACATTAATCTTGTTAATGACA  846

seq1  TTGCAGTTCATGGTTGGCCAGACATAACTTTGGAATTTTGGAATCAACCT  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTCATGGTTGGCCAGACATAACTTTGGAATTTTGGAATCAACCT  896

seq1  TTTTGTCTTTTTCTTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTTTTCTTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  946

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTT  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTT  996

seq1  TTTTTGTAGTTATACTTCAGAAATAAAGCCAGGGAGTTAAAGATACATGA  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTAGTTATACTTCAGAAATAAAGCCAGGGAGTTAAAGATACATGA  1046

seq1  AGAATCTATGAAGACAGGATACAGGATTTCCTATGATTTTATGTTGTTCT  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTATGAAGACAGGATACAGGATTTCCTATGATTTTATGTTGTTCT  1096

seq1  TAATTAGGAAGTATATTGGCAACACATGCTAACATATGTTAGTATGATTA  1128
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGGAAGTATATTGGCAACACATGCTAACATATGTTAGTATGATTA  1146

seq1  GTTATAGCCAAATAACTGTTTTATATTACAACTCTGAATTC  1169
      |||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGCCAAATAACTGTTTTATATTACAACTCTGAATTC  1187

seq1: chr7_77533076_77534139
seq2: B6Ng01-224D17.g_68_1137

seq1  GAATTCCTTGTGATACTAGAGATAGGACCTACAGTTCTGCATGCTTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTGATACTAGAGATAGGACCTACAGTTCTGCATGCTTATGT  50

seq1  AGCCTGCTGACCTTGCTTTACCTGTAAACCAGATAACCTTTAAGTAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTGACCTTGCTTTACCTGTAAACCAGATAACCTTTAAGTAATGT  100

seq1  TTTTGCTTGCATTTAAGGTTCTGTAACAATCAAGAACACGTGGACACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTGCATTTAAGGTTCTGTAACAATCAAGAACACGTGGACACCTA  150

seq1  CCTGTGGGAGGAGGCTTGGGGGAAACACTGTTTCTGGTTGCTGCTGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGAGGAGGCTTGGGGGAAACACTGTTTCTGGTTGCTGCTGAAGC  200

seq1  CAGCATTCTGGAGATGGACAGCTGCTCAAGGAAATGAAGGGAGATTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTCTGGAGATGGACAGCTGCTCAAGGAAATGAAGGGAGATTTTGT  250

seq1  AAATTGCAGATTCTAAGCAGGTAACTTACATGTGTGAAGGCCTGGACCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCAGATTCTAAGCAGGTAACTTACATGTGTGAAGGCCTGGACCAA  300

seq1  GTCCGCTAGATAGAGGAGAAGGCACCGTTCTTAAAAAGGCTTGATTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGCTAGATAGAGGAGAAGGCACCGTTCTTAAAAAGGCTTGATTAATG  350

seq1  ACAGCTTTGATTGTGAATGGGAGCAGAAGTCATACTGGGTTGGATTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTGATTGTGAATGGGAGCAGAAGTCATACTGGGTTGGATTCTGT  400

seq1  CCTCAGCGGCATCATTTTTATCCTATGAGAAACTTCAGTACTTAAAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCGGCATCATTTTTATCCTATGAGAAACTTCAGTACTTAAAGATA  450

seq1  ACAGACACACTTCCTAACCCAGGGCTTTTGTTTTACTGGATCCGTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACACTTCCTAACCCAGGGCTTTTGTTTTACTGGATCCGTTTTCT  500

seq1  GGATTCCTACACAGGACAAGAACTGTTGCTTCCCTGAGTTGGCCTGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCCTACACAGGACAAGAACTGTTGCTTCCCTGAGTTGGCCTGCTTT  550

seq1  TCCAGAGTATCTTAAAAGGTCTCTTGAAACAAATAAAATACTCAGAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGTATCTTAAAAGGTCTCTTGAAACAAATAAAATACTCAGAACTT  600

seq1  CTGGGACTGTCACAGACAGTGTCCTGTTACTGGCTTTAAACAGTCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACTGTCACAGACAGTGTCCTGTTACTGGCTTTAAACAGTCCCTCA  650

seq1  TGAGGAAGAAGCCCTATATCCTGAAGTCAGATGTCAATCATCCTGGGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGAAGCCCTATATCCTGAAGTCAGATGTCAATCATCCTGGGTAT  700

seq1  GTACAGGGGATTTAATGCTTTTAAGAATGTTTCATGTTTATCCCCATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGGATTTAATGCTTTTAAGAATGTTTCATGTTTATCCCCATTAA  750

seq1  ATTTCAGTTTGCTTTGGATTTTTGGGAGCTTTTGGGATCTATCACTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTTTGCTTTGGATTTTTGGGAGCTTTTGGGATCTATCACTCTCA  800

seq1  ACTTTTGTTGCTTTATAGACTGACTAGCACTAATTTTCCCCTCCATAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTTGCTTTATAGACTGACTAGCACTAATTTTCCCCTCCATAGTT  850

seq1  CCACTCAATTACTGAACTAAATTTTGACCATTTCAGGGATTCTGGAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAATTACTGAACTAAATTTTGACCATTTCAGGGATTCTGGAGTTT  900

seq1  CTGATGTTATTAT-GGGAAAAATTAGTG-CATTCTTATTCTGTCAGCTCG  948
      ||||||||||||| |||||||||||||| |||||||||||||||||||||
seq2  CTGATGTTATTATGGGGAAAAATTAGTGCCATTCTTATTCTGTCAGCTCG  950

seq1  TAAGTCGTGGATAAT-AGAATGTTCTCCAAAGTGAGATTAGCTTCTTCTC  997
      ||||||||||||||| |||||| |||||||||||||||||||||| ||||
seq2  TAAGTCGTGGATAATAAGAATG-TCTCCAAAGTGAGATTAGCTTC-TCTC  998

seq1  AAGTCCTGGGCTTGCCTATAT-GCCATG-CACGTAGGCA-TCTTAAATTT  1044
      ||||||||||| ||||||||| |||||| |||||||||| ||||||||||
seq2  AAGTCCTGGGC-TGCCTATATGGCCATGCCACGTAGGCATTCTTAAATTT  1047

seq1  A-TTTGTGCC--TGTTTCTTACC  1064
      | ||||||||  | |||||||||
seq2  ATTTTGTGCCTTTTTTTCTTACC  1070