BAC Information

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BAC

Clone NameB6Ng01-225A05
Chromosome7 (Build37)4 (Build37)
Map Location 115,241,219 - 115,242,39018,927,276 - 18,927,337
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482
Downstream geneOlfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225A05.bB6Ng01-225A05.g
ACCGA039315GA039316
length1,164746
definitionB6Ng01-225A05.b B6Ng01-225A05.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(115,241,219 - 115,242,390)(18,927,276 - 18,927,337)
sequence
gaattcaaagcatctggaatcattactgctttcctgatgagtactgagca
gttcatttaaaacaaacacaattaattttcagggagtccataaatttcaa
gcaatctcttgtttttcaatttgtgtgcgtattagtgcacattatctcag
tgattatggaacatacatgataacaaattatcttaggtaaatactcctgc
aatttgatatttgtttcaggttaggtcaagttagaaaatattgaactgac
cactaaaatgaactatattggcttctttcatttagtgtgcatatgttctt
ggtttactcttttcattgtggttgtttaatataatctattaggtacttgg
tgagtataggcaggaatgaggtgtttagttgagtaacatttataggtact
aacatttttttaggcaagagtataaatattattattaaatagaaaataat
gagtacagagagatatggatgttttctaggtaagaataaatatttcatag
ttcataccaagcaagagacagtttgtgtcaatttatataatatagtgtag
aacagaaatcatggttgacctgaagacacagctcaattctctcactaatc
ttaactccattaagttctacattgtatttgttcctttaatctttgttggt
gacaccatttctgttttcatgctatatttatgtatttaattggttttact
tttcattttgaaacagatattcttgaacaatatcatatatgtattgactc
tgcaacatcaagagacgtgatatacagcatacattcaagtctgatgccca
atgttcttcatcttttacatggcagaatgatgaccattattgatgaattt
atctaggaggagtgaaagggaggcttacaattaggtgtttgtaaaaaaac
ttcacaaacttttagtcatttattgttttagtgcacacaaagtgtaacta
agatgcaggtagattaacacatatttatatcagtataggttctataacat
ttacagtcctgatgacttcagtagaattttaacttattttttggaacaca
gcttcttggtgctcctcagaaaacacttcccagaagatgctgtgtcttct
tattaccacaaaaacaggtcctcagcccataactgaaatctgctcttctg
aactcttgcaggtt
gaattctttgtttagctctgagccccatttttgatggggttatttgattt
tctggagtccaccttgagtttttatatatattggatattagtcccctatc
tgatttaggataggtaaaggtcctttcccaatctgttggtggcctttttg
tcttattgacgttgtcttttgcccaatttctttgtttattattattcttt
aatctttattttggctaattaaattgtttttattattaaaacaaaataat
acaggatgattttaaatggaataaatttacttcttatagttgtgtgtaga
gcattggatgtccaatatcaagaaaccaatagattcaacatctaataaag
gcaagtattcttccctaccaatggggcctcttgctacatgtcatattgcc
caagaagacatgcatattccttctacatttttttcttatttcatttttta
ttagctattttctttatttacatttcaaatgttatcccctttcctggttt
ctcctctgaaactccctatccacctccctgccccctgcccgctcaccaac
ccaccactcctgctttctaaccctttcagtcccatttattgggacacata
accttcacacgaccaaagacctttcctcccattgatgacctattaggcca
tgctctgctacatatgcagctagaaccatgagttccaccatgtgtttatt
ttggttggtggtttagtcccagggagctctggagatacttggttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_115241219_115242390
seq2: B6Ng01-225A05.b_44_1207

seq1  GAATTCAAAGCATCTGGAATCATTACTGCTTTCCTGATGAGTACTGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCATCTGGAATCATTACTGCTTTCCTGATGAGTACTGAGCA  50

seq1  GTTCATTTAAAACAAACACAATTAATTTTCAGGGAGTCCATAAATTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTAAAACAAACACAATTAATTTTCAGGGAGTCCATAAATTTCAA  100

seq1  GCAATCTCTTGTTTTTCAATTTGTGTGCGTATTAGTGCACATTATCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTCTTGTTTTTCAATTTGTGTGCGTATTAGTGCACATTATCTCAG  150

seq1  TGATTATGGAACATACATGATAACAAATTATCTTAGGTAAATACTCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATGGAACATACATGATAACAAATTATCTTAGGTAAATACTCCTGC  200

seq1  AATTTGATATTTGTTTCAGGTTAGGTCAAGTTAGAAAATATTGAACTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATATTTGTTTCAGGTTAGGTCAAGTTAGAAAATATTGAACTGAC  250

seq1  CACTAAAATGAACTATATTGGCTTCTTTCATTTAGTGTGCATATGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAATGAACTATATTGGCTTCTTTCATTTAGTGTGCATATGTTCTT  300

seq1  GGTTTACTCTTTTCATTGTGGTTGTTTAATATAATCTATTAGGTACTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACTCTTTTCATTGTGGTTGTTTAATATAATCTATTAGGTACTTGG  350

seq1  TGAGTATAGGCAGGAATGAGGTGTTTAGTTGAGTAACATTTATAGGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATAGGCAGGAATGAGGTGTTTAGTTGAGTAACATTTATAGGTACT  400

seq1  AACATTTTTTTAGGCAAGAGTATAAATATTATTATTAAATAGAAAATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTTTAGGCAAGAGTATAAATATTATTATTAAATAGAAAATAAT  450

seq1  GAGTACAGAGAGATATGGATGTTTTCTAGGTAAGAATAAATATTTCATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGAGAGATATGGATGTTTTCTAGGTAAGAATAAATATTTCATAG  500

seq1  TTCATACCAAGCAAGAGACAGTTTGTGTCAATTTATATAATATAGTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACCAAGCAAGAGACAGTTTGTGTCAATTTATATAATATAGTGTAG  550

seq1  AACAGAAATCATGGTTGACCTGAAGACACAGCTCAATTCTCTCACTAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAATCATGGTTGACCTGAAGACACAGCTCAATTCTCTCACTAATC  600

seq1  TTAACTCCATTAAGTTCTACATTGTATTTGTTCCTTTAATCTTTGTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCCATTAAGTTCTACATTGTATTTGTTCCTTTAATCTTTGTTGGT  650

seq1  GACACCATTTCTGTTTTCATGCTATATTTATGTATTTAATTGGTTTTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCATTTCTGTTTTCATGCTATATTTATGTATTTAATTGGTTTTACT  700

seq1  TTTCATTTTGAAACAGATATTCTTGAACAATATCATATATGTATTGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTGAAACAGATATTCTTGAACAATATCATATATGTATTGACTC  750

seq1  TGCAACATCAAGAGACGTGATATACAGCATACATTCAAGTCTGATGCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACATCAAGAGACGTGATATACAGCATACATTCAAGTCTGATGCCCA  800

seq1  ATGTTCTTCATCTTTTACATGGCAGAATGATGACCATTATTGATGAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTCATCTTTTACATGGCAGAATGATGACCATTATTGATGAATTT  850

seq1  ATCTAGGAGGAGTGAAAGGGAGGCTTACAATTAGGTGTTTGTAAAAAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGAGGAGTGAAAGGGAGGCTTACAATTAGGTGTTTGTAAAAAAAC  900

seq1  TTCACAAACTTTTAGTCATTTATTGTTTTAGTGCACACAAAGTGTAACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAACTTTTAGTCATTTATTGTTTTAGTGCACACAAAGTGTAACTA  950

seq1  AGGATGCAGGTAGATTAACACATATTTATATCAGTATAGGTTTCTATAAC  1000
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  A-GATGCAGGTAGATTAACACATATTTATATCAGTATAGG-TTCTATAAC  998

seq1  ATTTACAGTCCTGATGAACTTCAGTAGAATTTTAACT--ATTTTTGGAAC  1048
      |||||||||||||||| ||||||||||||||||||||   ||||||||||
seq2  ATTTACAGTCCTGATG-ACTTCAGTAGAATTTTAACTTATTTTTTGGAAC  1047

seq1  ACAGCTTCTTTGTGCT-CTCAGAAAACACTTCCCAGAAGATGCTGGTGTC  1097
      |||||||||| ||||| ||||||||||||||||||||||||||| |||||
seq2  ACAGCTTCTTGGTGCTCCTCAGAAAACACTTCCCAGAAGATGCT-GTGTC  1096

seq1  TTCTTAATTACCACAAAAACAGTCTCTATGCCACAT-ACTGAAATTCTGC  1146
      ||||| ||||||||||||||||   ||  ||| ||| ||||||| |||||
seq2  TTCTT-ATTACCACAAAAACAGGTCCTCAGCC-CATAACTGAAA-TCTGC  1143

seq1  TCTTCTGAAACCTCTTGGCCCAGGTT  1172
      |||||||||  ||||||   ||||||
seq2  TCTTCTGAA--CTCTTG---CAGGTT  1164

seq1: chr4_18927276_18927337
seq2: B6Ng01-225A05.g_288_552

seq1  --------------------------------------------------  0
                                                        
seq2  TTGTTTTTATTATTAAAACAAAATAATACAGGATGATTTTAAATGGAATA  50

seq1  --------------------------------------------------  0
                                                        
seq2  AATTTACTTCTTATAGTTGTGTGTAGAGCATTGGATGTCCAATATCAAGA  100

seq1  --------------------------------------------------  0
                                                        
seq2  AACCAATAGATTCAACATCTAATAAAGGCAAGTATTCTTCCCTACCAATG  150

seq1  --------------------------------------------------  0
                                                        
seq2  GGGCCTCTTGCTACATGTCATATTGCCCAAGAAGACATGCATATTCCTTC  200

seq1  ---TTGTTTTTATTATTATTATTTTTATTAGATATTTTCTTTATTTACAT  47
          | ||||| |||||    |||||||||| ||||||||||||||||||
seq2  TACATTTTTTTCTTATTTCATTTTTTATTAGCTATTTTCTTTATTTACAT  250

seq1  TTCAAATGCTATCCC  62
      |||||||| ||||||
seq2  TTCAAATGTTATCCC  265