BAC Information

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BAC

Clone NameB6Ng01-225E19
Chromosome7 (Build37)
Map Location 60,310,329 - 60,391,248
singlet/doubletdoublet
Overlap geneGm1865
Upstream geneEG620782, LOC100040692
Downstream geneLOC100040718, LOC668789
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225E19.bB6Ng01-225E19.g
ACCGA039531GA039532
length1,1631,119
definitionB6Ng01-225E19.b B6Ng01-225E19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,390,087 - 60,391,248)(60,310,329 - 60,311,466)
sequence
gaattcactaaattttaacagcctcacatcacactttactctaaagacaa
agtatcatcacagacagaaaagctatttgtgattcacatgttaaacaaaa
gatctcttttcaaaatatatgctgaaattatgtcactaaaagaccctttt
gttcaaacacattgtgattactttttctagcatggcatatcagcaattct
agttcactcctctagttgcattttcttgatatgacttctcccatctcaga
tacaagtgttttaactggatttgattaccaaaagccatattaattcatta
tgcaaacagcaaatatttgtcaagatgaattggcttcctcaatactttga
gatttttccaagcattaaatattaagcaattgttactactagcgtcatac
catcaaggaaagaggaaaagaaaaaagagaaatgatgctaatattaatag
aaattcaaactccattttctactcaaaagatcttccacacacagtaaaac
aaagaggtttagattaggtgatcttcccattctcacacaattagctacca
gagaaacaataattagctatatgtgtatctaaatagagtacactcaaagt
acaacagagctgatggagaacaaagcacttttcattccataagtcactgg
aattttaaaagtatgaatgaaggagaaatagtaccagttggaaggtctgc
agacactaacagggatttctggggatacctgcacatggcaaatgtataca
catccaatcaattcatcattgcaagaagtttggcaagcatctccagtcac
attgcaaaacacaaatatgaatttaataagagcttccttgactttaccta
gatcacagagcaggcaaggtatagaactgcaattcatgttctaacttcaa
gtatgaactatcttggtatttcacatctctagcctttaaaaaaagagaaa
aagaagaagaaagaaagaaagaaaagaaagaaagaaagaaagaaagaaac
acttgaacctttagattagtaaataatggcagaaatcaccctcagtatgg
taatgattaagtgaacaattattgaaaaccttagttctttccagtcagga
aaatatttacaaagctccgtgtgtgtatttaacattgacttgaatttatt
tttctattcaatt

gaattcttatgtcttatttcaaaaatctgtacagaagaaaattggaaaat
ctaaagaaatgaaatgcttttttgattgatattctttaacaatgttaatt
caagatcagacaaagaaattaaatagacttatagctcctaaggaaataaa
agcactcatttaaagtctcctaattataaactaaaagcccagggctagat
ggattcagagcagatttctaccagattttcgaagatgaggacatatctgg
gggcttgtaagaaaactccaggaaaccaagagatgagccttgtggcctca
gcttcttcaaaaacatggacttgttctcccattgtgtttcatacccctct
cgaagtagcaaataggaatgatttgagtttaagtaattcattacaactag
atattgttagtagcttatagacttccagggtaaaaaagaaaacaaatatt
tgtctataaataagctatgcagagcttgtcttccatttgtggattgcctg
tcatgtaacttgctttgtggttgtatgttttactcatgtgactcatctta
actctgatcgtaaattatctgatgctatgaataaaggtggctattgtatg
agactttagtgtgccttatttataagctctactttcccggatcccactga
cagctagagcattaaaaagtggtgcacagatcaggctcctgaacttggct
atgagatatgggagtgagggccctcattggaaggatttggtgatattata
ctttggcataatatctcaataaagatacacaaatatcaaaatcccaacta
ttagattgtcttcaagtcattcaggattataatttctggttttcagaagg
aacttcagaggaaaaagttttgatcagagaccaaaaaaacattgaaagag
ggaaaggatgaccattcagtttgagattatatacaaattaattcaattat
tttcaaattcttaagaattatcagagagcctgctgacagagcctgatata
gctgtctccgagagctctgcagtgcctgcaaatacagaagtggatgctca
cagtcatcattgatggagcacagtcccaatgaggagcagataataccaga
agcctgaaggactgaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60390087_60391248
seq2: B6Ng01-225E19.b_41_1203 (reverse)

seq1  AATTGAATAG-AAAATAAAT--CAGTC-ATGT--AATACACAC---GAGC  41
      |||||||||| |||||||||   |||| ||||  |||||||||   ||||
seq2  AATTGAATAGAAAAATAAATTCAAGTCAATGTTAAATACACACACGGAGC  50

seq1  -TTGT-AATATTT--CTGACTG--AAGAACT-AGGTTTTCAATAATTGTT  84
       |||| |||||||  |||||||  ||||||| ||||||||||||||||||
seq2  TTTGTAAATATTTTCCTGACTGGAAAGAACTAAGGTTTTCAATAATTGTT  100

seq1  CAC-TAATCATTA-CATACTGA-GGTGATTTCTGCCATTATTTACTAATC  131
      ||| ||||||||| |||||||| |||||||||||||||||||||||||||
seq2  CACTTAATCATTACCATACTGAGGGTGATTTCTGCCATTATTTACTAATC  150

seq1  TAAAGGTTCAATGTTGTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT  181
      |||||||||||    || ||||      |||||||   |||||||   ||
seq2  TAAAGGTTCAA----GTGTTTC------TTTCTTT--CTTTCTTT--CTT  186

seq1  TCTTTTCTTTTCTTTTTCTTTCTTTCTTTTTTCTTCT-TTTTTTTTAAGG  230
      |||||||||   | |||||||| ||||| ||| |||| ||||||| ||||
seq2  TCTTTTCTT---TCTTTCTTTC-TTCTTCTTT-TTCTCTTTTTTTAAAGG  231

seq1  CTAGAGATGTGAAATACCAAGATAGTTCATACTTGAAGTTAGAACATGAA  280
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATGTGAAATACCAAGATAGTTCATACTTGAAGTTAGAACATGAA  281

seq1  TTGCAGTTCTATACCTTGCCTGCTCTGTGATCTAGGTAAAGTCAAGGAAG  330
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTCTATACCTTGCCTGCTCTGTGATCTAGGTAAAGTCAAGGAAG  331

seq1  CTCTTATTAAATTCATATTTGTGTTTTGCAATGTGACTGGAGATGCTTGC  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATTAAATTCATATTTGTGTTTTGCAATGTGACTGGAGATGCTTGC  381

seq1  CAAACTTCTTGCAATGATGAATTGATTGGATGTGTATACATTTGCCATGT  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTCTTGCAATGATGAATTGATTGGATGTGTATACATTTGCCATGT  431

seq1  GCAGGTATCCCCAGAAATCCCTGTTAGTGTCTGCAGACCTTCCAACTGGT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTATCCCCAGAAATCCCTGTTAGTGTCTGCAGACCTTCCAACTGGT  481

seq1  ACTATTTCTCCTTCATTCATACTTTTAAAATTCCAGTGACTTATGGAATG  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTCTCCTTCATTCATACTTTTAAAATTCCAGTGACTTATGGAATG  531

seq1  AAAAGTGCTTTGTTCTCCATCAGCTCTGTTGTACTTTGAGTGTACTCTAT  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCTTTGTTCTCCATCAGCTCTGTTGTACTTTGAGTGTACTCTAT  581

seq1  TTAGATACACATATAGCTAATTATTGTTTCTCTGGTAGCTAATTGTGTGA  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATACACATATAGCTAATTATTGTTTCTCTGGTAGCTAATTGTGTGA  631

seq1  GAATGGGAAGATCACCTAATCTAAACCTCTTTGTTTTACTGTGTGTGGAA  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGAAGATCACCTAATCTAAACCTCTTTGTTTTACTGTGTGTGGAA  681

seq1  GATCTTTTGAGTAGAAAATGGAGTTTGAATTTCTATTAATATTAGCATCA  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTGAGTAGAAAATGGAGTTTGAATTTCTATTAATATTAGCATCA  731

seq1  TTTCTCTTTTTTCTTTTCCTCTTTCCTTGATGGTATGACGCTAGTAGTAA  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTTTTTCTTTTCCTCTTTCCTTGATGGTATGACGCTAGTAGTAA  781

seq1  CAATTGCTTAATATTTAATGCTTGGAAAAATCTCAAAGTATTGAGGAAGC  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCTTAATATTTAATGCTTGGAAAAATCTCAAAGTATTGAGGAAGC  831

seq1  CAATTCATCTTGACAAATATTTGCTGTTTGCATAATGAATTAATATGGCT  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCATCTTGACAAATATTTGCTGTTTGCATAATGAATTAATATGGCT  881

seq1  TTTGGTAATCAAATCCAGTTAAAACACTTGTATCTGAGATGGGAGAAGTC  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAATCAAATCCAGTTAAAACACTTGTATCTGAGATGGGAGAAGTC  931

seq1  ATATCAAGAAAATGCAACTAGAGGAGTGAACTAGAATTGCTGATATGCCA  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAGAAAATGCAACTAGAGGAGTGAACTAGAATTGCTGATATGCCA  981

seq1  TGCTAGAAAAAGTAATCACAATGTGTTTGAACAAAAGGGTCTTTTAGTGA  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAAAAAGTAATCACAATGTGTTTGAACAAAAGGGTCTTTTAGTGA  1031

seq1  CATAATTTCAGCATATATTTTGAAAAGAGATCTTTTGTTTAACATGTGAA  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTCAGCATATATTTTGAAAAGAGATCTTTTGTTTAACATGTGAA  1081

seq1  TCACAAATAGCTTTTCTGTCTGTGATGATACTTTGTCTTTAGAGTAAAGT  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATAGCTTTTCTGTCTGTGATGATACTTTGTCTTTAGAGTAAAGT  1131

seq1  GTGATGTGAGGCTGTTAAAATTTAGTGAATTC  1162
      ||||||||||||||||||||||||||||||||
seq2  GTGATGTGAGGCTGTTAAAATTTAGTGAATTC  1163


seq1: chr7_60310329_60311466
seq2: B6Ng01-225E19.g_64_1182

seq1  GAATTCTTATGTCTTATTTCAAAAATCTGTACAGAAGAAAATTGGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGTCTTATTTCAAAAATCTGTACAGAAGAAAATTGGAAAAT  50

seq1  CTAAAGAAATGAAATGCTTTTTTGATTGATATTCTTTAACAATGTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAAATGAAATGCTTTTTTGATTGATATTCTTTAACAATGTTAATT  100

seq1  CAAGATCAGACAAAGAAATTAAATAGACTTATAGCTCCTAAGGAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCAGACAAAGAAATTAAATAGACTTATAGCTCCTAAGGAAATAAA  150

seq1  AGCACTCATTTAAAGTCTCCTAATTATAAACTAAAAGCCCAGGGCTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCATTTAAAGTCTCCTAATTATAAACTAAAAGCCCAGGGCTAGAT  200

seq1  GGATTCAGAGCAGATTTCTACCAGATTTTCGAAGATGAGGACATATCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGAGCAGATTTCTACCAGATTTTCGAAGATGAGGACATATCTGG  250

seq1  GGGCTTGTAAGAAAACTCCAGGAAACCAAGAGATGAGCCTTGTGGCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGTAAGAAAACTCCAGGAAACCAAGAGATGAGCCTTGTGGCCTCA  300

seq1  GCTTCTTCAAAAACATGGACTTGTTCTCCCATTGTGTTTCATACCCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCAAAAACATGGACTTGTTCTCCCATTGTGTTTCATACCCCTCT  350

seq1  CGAAGTAGCAAATAGGAATGATTTGAGTTTAAGTAATTCATTACAACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGTAGCAAATAGGAATGATTTGAGTTTAAGTAATTCATTACAACTAG  400

seq1  ATATTGTTAGTAGCTTATAGACTTCCAGGGTAAAAAAGAAAACAAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTAGTAGCTTATAGACTTCCAGGGTAAAAAAGAAAACAAATATT  450

seq1  TGTCTATAAATAAGCTATGCAGAGCTTGTCTTCCATTTGTGGATTGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATAAATAAGCTATGCAGAGCTTGTCTTCCATTTGTGGATTGCCTG  500

seq1  TCATGTAACTTGCTTTGTGGTTGTATGTTTTACTCATGTGACTCATCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAACTTGCTTTGTGGTTGTATGTTTTACTCATGTGACTCATCTTA  550

seq1  ACTCTGATCGTAAATTATCTGATGCTATGAATAAAGGTGGCTATTGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGATCGTAAATTATCTGATGCTATGAATAAAGGTGGCTATTGTATG  600

seq1  AGACTTTAGTGTGCCTTATTTATAAGCTCTACTTTCCCGGATCCCACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTAGTGTGCCTTATTTATAAGCTCTACTTTCCCGGATCCCACTGA  650

seq1  CAGCTAGAGCATTAAAAAGTGGTGCACAGATCAGGCTCCTGAACTTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGAGCATTAAAAAGTGGTGCACAGATCAGGCTCCTGAACTTGGCT  700

seq1  ATGAGATATGGGAGTGAGGGCCCTCATTGGAAGGATTTGGTGATATTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATATGGGAGTGAGGGCCCTCATTGGAAGGATTTGGTGATATTATA  750

seq1  CTTTGGCATAATATCTCAATAAAGATACACAAATATCAAAATCCCAACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCATAATATCTCAATAAAGATACACAAATATCAAAATCCCAACTA  800

seq1  TTAGATTGTCTTCAAGTCATTCAGGATTATAATTTCTGGTTTTCAGAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTGTCTTCAAGTCATTCAGGATTATAATTTCTGGTTTTCAGAAGG  850

seq1  AACTTCAGAGGAAAAAGTTTTGATCAGAGACCAAAAAAACATTGAAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGAGGAAAAAGTTTTGATCAGAGACCAAAAAAACATTGAAAGAG  900

seq1  GGAAAGGATGACCATTCAGTTTGAGATTATATACAAATTAATTCAAATTA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGAAAGGATGACCATTCAGTTTGAGATTATATACAAATTAATTC-AATTA  949

seq1  TTTTCAAAATTCTTAAGAAATATCAGAAGAGCCTGCTGACAGGAGCCTGA  1000
      ||||| ||||||||||||| |||||| |||||||||||||| ||||||||
seq2  TTTTC-AAATTCTTAAGAATTATCAG-AGAGCCTGCTGACA-GAGCCTGA  996

seq1  TATAGCTGTCTCCCGAGAGGCTCTGCCAGTGCCTGGCAAATACAGAAGTG  1050
      ||||||||||| |||||| |||||| |||||||| |||||||||||||||
seq2  TATAGCTGTCT-CCGAGA-GCTCTG-CAGTGCCT-GCAAATACAGAAGTG  1042

seq1  GATGCTCACAGTCATCCATTGGATGGAGCACAAGGTCCCCAATGAAGGAG  1100
      ||||||||||||||| |||| |||||||||||  || ||||||| |||||
seq2  GATGCTCACAGTCAT-CATT-GATGGAGCACA--GT-CCCAATG-AGGAG  1086

seq1  CCAGATAAATACCCAGAGAGCTGAAGGGGACTGAAGCC  1138
       ||||| |||| |||||   |||||  |||||||||||
seq2  -CAGAT-AATA-CCAGAAGCCTGAA--GGACTGAAGCC  1119


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