BAC Information

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BAC

Clone NameB6Ng01-226B24
Chromosome7 (Build37)
Map Location 27,179,443 - 27,324,566
singlet/doubletdoublet
Overlap geneLOC100043195, Nlrp4a, Nlrp9a
Upstream geneLipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c
Downstream geneV1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226B24.bB6Ng01-226B24.g
ACCGA040146GA040147
length1,129749
definitionB6Ng01-226B24.b B6Ng01-226B24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,323,437 - 27,324,566)(27,179,443 - 27,180,191)
sequence
gaattccatggccagaaagccagagtgtgtaggttggtgagcagggatag
agaaaggggaaaccaggaaagaggttaacatttgaaatgtaaatgaagaa
aatacctaataaaaaagtaataaaaaaagaaaaggactttctattttcat
tgaggcataaaaatcatactcatcaataggaagttttgcaaacgttcagt
acttttgtacactgggtaatgttcaaaccacagaataacacccttctcca
aaaatatttctttgtagtgaaaacatcaaaaatccttcaaatgtttttga
aacatatgcacattattatctataatcaaccaagtatgaattagaacacc
agatacttttaatatttttaaaaaattattttaacttttcttccaataaa
atactttatgtctagcaatacaatttacatattaagtaataatataatag
aatggcttaatatagtattaaacaaaatgaaaaaggtgaaattttcacat
ggtaaacttctccccacaatgtaaaaaaaaaaaaaaaaaagtcacattct
aagtggatcaatacaaccaatgtattcactagctagccatgtctaactcc
tattacactaatggtcagttgctttaaaaagaacataatccttacaatga
atacctcaaaagaattcacatttccacttttagaaaaaaagtaaacaaga
aaaaaatctatggcctggagaaacagcttagggattaggaacattggctg
cacttgcagaacacctggatttgaatctcagcatctacacaacacagtgg
ttcatagccacctgtaattcagtgcactcactgataagtggatattagcc
cagaaacttagaatacccaagatacaatttgcaaaacacatgaaactcaa
gaagaagaccaaagtgtggatactttcactcctttagaatagggaacaaa
aatacccatggaagggagttatacagacaaagttcagaagctgagacgga
agagaggaccatccagagacttccccactcgggatccatttccataaaca
gccaccaactcagacactattgcatatgccagcagattgctgacggacct
gttatagctgtctcgtgtgaggctatgcc
gaattcattgttaaaattaatggctagaaactggtggcacacacctttaa
ttccagcacttggaagcagacagaggcaggagcgtctctgagtttgaggg
cagcctgttctaaacagtgagttccaggacagccagggctacacagaaaa
actctgtcagtctcaaaaagtcaacaaaatcaaacaaaaccatttatact
aaggctacagtcagagaatgataaactaaaaaatttcaataaaatggtga
agttcatcaaaagagtcaaagaagtggagttgacttctcctgaagaccca
gctgtataattcttgcgcatttacccaaaagatgccctaccatgccacag
ggacaccagttctactatgttcatttatttgtaatagccagaagctggaa
acaaaccagatgtcccacaatagaagaatggatacagaaaatgtggttca
tttacacaataactcagctattaagaaagagggcatcatgagttttcagg
caaatggattgaactagaaaatatcctgagtgaggtaacacagaaacaaa
aggatatgcattgtatgtattcactaataagtggataccagccaataaga
atacagaattcccaggacacaacccacagaactcaagaaggctaacaagc
tgaagggaccaagtgaggatgcctcaatcccacttgggaaggagaagaaa
gcaatcacaggaggtatggaaggaggaacctgggtaggaaatgtgacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_27323437_27324566
seq2: B6Ng01-226B24.b_50_1178 (reverse)

seq1  GGCATAGCCTCACACGAGACAGCTATAACAGGGTCCCGTCAGCAAAATCT  50
      ||||||||||||||||||||||||||||||||   ||||||||  |||| 
seq2  GGCATAGCCTCACACGAGACAGCTATAACAGG--TCCGTCAGC--AATC-  45

seq1  TGCTGGCATATGCAATAGTGTCTGAGTTTGGTGGCTGTTTATGG-AATGG  99
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  TGCTGGCATATGCAATAGTGTCTGAG-TTGGTGGCTGTTTATGGAAATGG  94

seq1  ATCCCCGAGTGGGGAAGTCTCTGGATGGTCCTCTCTTCCGTCTCAGC-TC  148
      || |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AT-CCCGAGTGGGGAAGTCTCTGGATGGTCCTCTCTTCCGTCTCAGCTTC  143

seq1  TGAACTTTGTCTGTATAACTCCC-TCCATGGGTA-TTTTGTTCCCTATTC  196
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  TGAACTTTGTCTGTATAACTCCCTTCCATGGGTATTTTTGTTCCCTATTC  193

seq1  T-AAGGAGTG-AAGTATCCACACTTTGGTCTTCTTCTTGAGTTTCATGTG  244
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAGTGAAAGTATCCACACTTTGGTCTTCTTCTTGAGTTTCATGTG  243

seq1  TTTTGCAAATTGTATCTTGGGTATTCTAAGTTTCTGGGCTAATATCCACT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAAATTGTATCTTGGGTATTCTAAGTTTCTGGGCTAATATCCACT  293

seq1  TATCAGTGAGTGCACTGAATTACAGGTGGCTATGAACCACTGTGTTGTGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTGAGTGCACTGAATTACAGGTGGCTATGAACCACTGTGTTGTGT  343

seq1  AGATGCTGAGATTCAAATCCAGGTGTTCTGCAAGTGCAGCCAATGTTCCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGAGATTCAAATCCAGGTGTTCTGCAAGTGCAGCCAATGTTCCT  393

seq1  AATCCCTAAGCTGTTTCTCCAGGCCATAGATTTTTTTCTTGTTTACTTTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTAAGCTGTTTCTCCAGGCCATAGATTTTTTTCTTGTTTACTTTT  443

seq1  TTTCTAAAAGTGGAAATGTGAATTCTTTTGAGGTATTCATTGTAAGGATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAAGTGGAAATGTGAATTCTTTTGAGGTATTCATTGTAAGGATT  493

seq1  ATGTTCTTTTTAAAGCAACTGACCATTAGTGTAATAGGAGTTAGACATGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTTTTAAAGCAACTGACCATTAGTGTAATAGGAGTTAGACATGG  543

seq1  CTAGCTAGTGAATACATTGGTTGTATTGATCCACTTAGAATGTGACTTTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTAGTGAATACATTGGTTGTATTGATCCACTTAGAATGTGACTTTT  593

seq1  TTTTTTTTTTTTTTACATTGTGGGGAGAAGTTTACCATGTGAAAATTTCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTACATTGTGGGGAGAAGTTTACCATGTGAAAATTTCA  643

seq1  CCTTTTTCATTTTGTTTAATACTATATTAAGCCATTCTATTATATTATTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTCATTTTGTTTAATACTATATTAAGCCATTCTATTATATTATTA  693

seq1  CTTAATATGTAAATTGTATTGCTAGACATAAAGTATTTTATTGGAAGAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATATGTAAATTGTATTGCTAGACATAAAGTATTTTATTGGAAGAAA  743

seq1  AGTTAAAATAATTTTTTAAAAATATTAAAAGTATCTGGTGTTCTAATTCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAATAATTTTTTAAAAATATTAAAAGTATCTGGTGTTCTAATTCA  793

seq1  TACTTGGTTGATTATAGATAATAATGTGCATATGTTTCAAAAACATTTGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGTTGATTATAGATAATAATGTGCATATGTTTCAAAAACATTTGA  843

seq1  AGGATTTTTGATGTTTTCACTACAAAGAAATATTTTTGGAGAAGGGTGTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTTGATGTTTTCACTACAAAGAAATATTTTTGGAGAAGGGTGTT  893

seq1  ATTCTGTGGTTTGAACATTACCCAGTGTACAAAAGTACTGAACGTTTGCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGGTTTGAACATTACCCAGTGTACAAAAGTACTGAACGTTTGCA  943

seq1  AAACTTCCTATTGATGAGTATGATTTTTATGCCTCAATGAAAATAGAAAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCTATTGATGAGTATGATTTTTATGCCTCAATGAAAATAGAAAG  993

seq1  TCCTTTTCTTTTTTTATTACTTTTTTATTAGGTATTTTCTTCATTTACAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCTTTTTTTATTACTTTTTTATTAGGTATTTTCTTCATTTACAT  1043

seq1  TTCAAATGTTAACCTCTTTCCTGGTTTCCCCTTTCTCTATCCCTGCTCAC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGTTAACCTCTTTCCTGGTTTCCCCTTTCTCTATCCCTGCTCAC  1093

seq1  CAACCTACACACTCTGGCTTTCTGGCCATGGAATTC  1130
      ||||||||||||||||||||||||||||||||||||
seq2  CAACCTACACACTCTGGCTTTCTGGCCATGGAATTC  1129

seq1: chr7_27179443_27180191
seq2: B6Ng01-226B24.g_68_816

seq1  GAATTCATTGTTAAAATTAATGGCTAGAAACTGGTGGCACACACCTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTAAAATTAATGGCTAGAAACTGGTGGCACACACCTTTAA  50

seq1  TTCCAGCACTTGGAAGCAGACAGAGGCAGGAGCGTCTCTGAGTTTGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCACTTGGAAGCAGACAGAGGCAGGAGCGTCTCTGAGTTTGAGGG  100

seq1  CAGCCTGTTCTAAACAGTGAGTTCCAGGACAGCCAGGGCTACACAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTTCTAAACAGTGAGTTCCAGGACAGCCAGGGCTACACAGAAAA  150

seq1  ACTCTGTCAGTCTCAAAAAGTCAACAAAATCAAACAAAACCATTTATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTCAGTCTCAAAAAGTCAACAAAATCAAACAAAACCATTTATACT  200

seq1  AAGGCTACAGTCAGAGAATGATAAACTAAAAAATTTCAATAAAATGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTACAGTCAGAGAATGATAAACTAAAAAATTTCAATAAAATGGTGA  250

seq1  AGTTCATCAAAAGAGTCAAAGAAGTGGAGTTGACTTCTCCTGAAGACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATCAAAAGAGTCAAAGAAGTGGAGTTGACTTCTCCTGAAGACCCA  300

seq1  GCTGTATAATTCTTGCGCATTTACCCAAAAGATGCCCTACCATGCCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATAATTCTTGCGCATTTACCCAAAAGATGCCCTACCATGCCACAG  350

seq1  GGACACCAGTTCTACTATGTTCATTTATTTGTAATAGCCAGAAGCTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCAGTTCTACTATGTTCATTTATTTGTAATAGCCAGAAGCTGGAA  400

seq1  ACAAACCAGATGTCCCACAATAGAAGAATGGATACAGAAAATGTGGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCAGATGTCCCACAATAGAAGAATGGATACAGAAAATGTGGTTCA  450

seq1  TTTACACAATAACTCAGCTATTAAGAAAGAGGGCATCATGAGTTTTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACAATAACTCAGCTATTAAGAAAGAGGGCATCATGAGTTTTCAGG  500

seq1  CAAATGGATTGAACTAGAAAATATCCTGAGTGAGGTAACACAGAAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGATTGAACTAGAAAATATCCTGAGTGAGGTAACACAGAAACAAA  550

seq1  AGGATATGCATTGTATGTATTCACTAATAAGTGGATACCAGCCAATAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATGCATTGTATGTATTCACTAATAAGTGGATACCAGCCAATAAGA  600

seq1  ATACAGAATTCCCAGGACACAACCCACAGAACTCAAGAAGGCTAACAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAATTCCCAGGACACAACCCACAGAACTCAAGAAGGCTAACAAGC  650

seq1  TGAAGGGACCAAGTGAGGATGCCTCAATCCCACTTGGGAAGGAGAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGACCAAGTGAGGATGCCTCAATCCCACTTGGGAAGGAGAAGAAA  700

seq1  GCAATCACAGGAGGTATGGAAGGAGGAACCTGGGTAGGAAATGTGACAG  749
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCACAGGAGGTATGGAAGGAGGAACCTGGGTAGGAAATGTGACAG  749