BAC Information

Click to search

BAC

Clone NameB6Ng01-226D05
Chromosome7 (Build37)
Map Location 133,969,364 - 134,154,150
singlet/doubletdoublet
Overlap gene1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp
Upstream geneD430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa
Downstream gene2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226D05.bB6Ng01-226D05.g
ACCGA040202GA040203
length1,1581,158
definitionB6Ng01-226D05.b B6Ng01-226D05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,969,364 - 133,970,532)(134,152,980 - 134,154,150)
sequence
gaattctctcctcctaggacttatagtgagatcacactcctccccagaac
agctctgcagggaggagctgagtgtgttaagtgcctagaacaattcttgg
ctccatcgtattgaggctcacctcttaggatcctttgccatgtgacttcc
ccttgctctctcccaaccacttccccagctaaagggtcccagagaagctt
ggtgccggacacctccttctcacctattcttagctagaggtcaccttttg
gctcttgcattcccaacctcaagtccgttcttggccttgttccaccttta
atccttaggtaggtgggaggatcagggttaatccaggggcaacagctgtc
cttccttctgagcacctaactgctgagagagcaggcatggaatctaaccc
ctcacttgtcaaccaagggctgagtcccttctagttcttcacatcccaga
gtcctatggcttccatccctcaacgcatccctaggcacgctctgagcctt
ccctgagcacggttgggtcctgtctgtatttctgctgtctctagctagct
gcttcttccctgccacctgactctggctcctggtcacatccctctacaac
actgcagtatgggtccctttgagagagggctgtcccctgctccaggtcag
cccacctgagtaagccactgctggctctgttctcaccacaccctctcacc
agcattcacttggtgtatggtggctagctggatagctctttgctctgttc
cctctgggcctttctgtctcccatccccaccccaggcctgactgaggatt
cctggacttgagaaagcttctgtgctgactcaagagaaaaaaaaaaaaaa
gcgcagagttgcgtatctgtgtgcttcccgtatttgtttactccaaagtc
tgtagaactctctctgttcttggcatctttgctcggcagtttctctttac
tgctggccatacctgaactaacaatagacttgccaccttggagcaagcag
gctgcactgacagccctctggtgccctgggacgcttcaactctctgactt
ctcgagacagtgggacgagcagactcctgtgttattcttctgctacagta
cttaccttctcataacacaggtccgtgaaaaggtgaacaagctgtctgct
tggtaaat
gaattccaaatgtcacacagttgcagaaactatctgcagctggtaaaacc
atgcctctgctagagcacgaggcaaatcatagtcagctgctgtggacggt
ccgatgcagcccacaccccacacctgggattaaaacaaaagtgctttctt
aaaatatttctgtatttttaaagaaaccacaattccagaattctcactac
agtggctctcaatctttgagtcattgtgagaactttttaaaaaattaatc
agtgctcagaccctaccctctatgaaagaaaccccaaatctccagagata
cacagctttaagaatgtccaggagagatggcttgacaacgaagagctggt
cctgctcttacagaagttcaactccctgcactcacatgagcactcccaca
cagacacatagttaaaataataaaagactaagctgggcagtggtaatact
tgcccttaattccagcactccagaggcagaagccagcagatctttgtgat
ttcaaggccaacctggtctacagagtgagttccaggacagccagggctac
agagactgtctcaaaattactactactactaaaacaaaaaagaaaacctc
cctgcggaccacgagcagtgaggcactgtgaaccagccactggctattta
gattccctatgccagacattcgaaggttattttgaaaattcctgaaatgt
gatgattcatggctcattgattttggctgatacatcaacattgcctttga
gttgccagaaaaggaacgaagccaagcatggtggcccataccagtagtct
cagcactcaggaagtcgaggcaggaggcttgctttgagttcgaagccttc
atagacttcatcatagtagtaatccactacccagggttacatagcaagat
tctatctggaaaagaaaaagggaaagaacagacgtagtagttcactctaa
ggatttgggaagacagaaagattgctgtgcagcagcctgggctacagaag
tgagacgtctcagacaaacctggggctgcagcttgcctcgttctgtgtcg
tgcactgagacagtagcagctgcaccctgacctcacacacccctcttggc
caagcagactgtaacccaagcttctgctgctactgagactagctgtgctc
cgacaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_133969364_133970532
seq2: B6Ng01-226D05.b_47_1204

seq1  GAATTCTCTCCTCCTAGGACTTATAGTGAGATCACACTCCTCCCCAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTCCTAGGACTTATAGTGAGATCACACTCCTCCCCAGAAC  50

seq1  AGCTCTGCAGGGAGGAGCTGAGTGTGTTAAGTGCCTAGAACAATTCTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGCAGGGAGGAGCTGAGTGTGTTAAGTGCCTAGAACAATTCTTGG  100

seq1  CTCCATCGTATTGAGGCTCACCTCTTAGGATCCTTTGCCATGTGACTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCGTATTGAGGCTCACCTCTTAGGATCCTTTGCCATGTGACTTCC  150

seq1  CCTTGCTCTCTCCCAACCACTTCCCCAGCTAAAGGGTCCCAGAGAAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTCTCTCCCAACCACTTCCCCAGCTAAAGGGTCCCAGAGAAGCTT  200

seq1  GGTGCCGGACACCTCCTTCTCACCTATTCTTAGCTAGAGGTCACCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCGGACACCTCCTTCTCACCTATTCTTAGCTAGAGGTCACCTTTTG  250

seq1  GCTCTTGCATTCCCAACCTCAAGTCCGTTCTTGGCCTTGTTCCACCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGCATTCCCAACCTCAAGTCCGTTCTTGGCCTTGTTCCACCTTTA  300

seq1  ATCCTTAGGTAGGTGGGAGGATCAGGGTTAATCCAGGGGCAACAGCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGGTAGGTGGGAGGATCAGGGTTAATCCAGGGGCAACAGCTGTC  350

seq1  CTTCCTTCTGAGCACCTAACTGCTGAGAGAGCAGGCATGGAATCTAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTGAGCACCTAACTGCTGAGAGAGCAGGCATGGAATCTAACCC  400

seq1  CTCACTTGTCAACCAAGGGCTGAGTCCCTTCTAGTTCTTCACATCCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTGTCAACCAAGGGCTGAGTCCCTTCTAGTTCTTCACATCCCAGA  450

seq1  GTCCTATGGCTTCCATCCCTCAACGCATCCCTAGGCACGCTCTGAGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATGGCTTCCATCCCTCAACGCATCCCTAGGCACGCTCTGAGCCTT  500

seq1  CCCTGAGCACGGTTGGGTCCTGTCTGTATTTCTGCTGTCTCTAGCTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGCACGGTTGGGTCCTGTCTGTATTTCTGCTGTCTCTAGCTAGCT  550

seq1  GCTTCTTCCCTGCCACCTGACTCTGGCTCCTGGTCACATCCCTCTACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCCCTGCCACCTGACTCTGGCTCCTGGTCACATCCCTCTACAAC  600

seq1  ACTGCAGTATGGGTCCCTTTGAGAGAGGGCTGTCCCCTGCTCCAGGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGTATGGGTCCCTTTGAGAGAGGGCTGTCCCCTGCTCCAGGTCAG  650

seq1  CCCACCTGAGTAAGCCACTGCTGGCTCTGTTCTCACCACACCCTCTCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTGAGTAAGCCACTGCTGGCTCTGTTCTCACCACACCCTCTCACC  700

seq1  AGCATTCACTTGGTGTATGGTGGCTAGCTGGATAGCTCTTTGCTCTGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCACTTGGTGTATGGTGGCTAGCTGGATAGCTCTTTGCTCTGTTC  750

seq1  CCTCTGGGCCTTTCTGTCTCCCATCCCCACCCCAGGCCTGACTGAGGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGCCTTTCTGTCTCCCATCCCCACCCCAGGCCTGACTGAGGATT  800

seq1  CCTGGACTTGAGAAAGCTTCTGTGCTGACTCAAGAG-AAAAAAAAAAAAA  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTGGACTTGAGAAAGCTTCTGTGCTGACTCAAGAGAAAAAAAAAAAAAA  850

seq1  GCGCAGAGTTGCGTATCTGTGTGCTTCCCGTATTTGTTTACTCCAAAGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAGAGTTGCGTATCTGTGTGCTTCCCGTATTTGTTTACTCCAAAGTC  900

seq1  TGTAGAACTCTCTCTGTTCTTGGCATCTTTGCTCGGCAGTTTCTCTTTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACTCTCTCTGTTCTTGGCATCTTTGCTCGGCAGTTTCTCTTTAC  950

seq1  TGCTGGCCATACCTGAACTAACAATAGACTTGCCACCTTGGAGCAAAGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  TGCTGGCCATACCTGAACTAACAATAGACTTGCCACCTTGGAGCAA--GC  998

seq1  AGGCTGCACTGACAGCCCCTCTGGTGCCCTGGGGACCGGCTCCAACTCTC  1049
      ||||||||||||||| |||||||||||||| |||||  ||| ||||||||
seq2  AGGCTGCACTGACAG-CCCTCTGGTGCCCT-GGGAC--GCTTCAACTCTC  1044

seq1  TGACCTTCTCGAGACAGTGGGGCCGAGCAAGGACTCCTGTGGTTATCTCT  1099
      ||| |||||||||||||| ||| ||||||  ||||||||| ||||| |||
seq2  TGA-CTTCTCGAGACAGT-GGGACGAGCA--GACTCCTGT-GTTAT-TCT  1088

seq1  T-GGCTACAGTACTTAACCTCTCCATAACACAGGGTTTCGTG-AGAGGTG  1147
      |  ||||||||||||| | ||| |||||||||||  | |||| | |||||
seq2  TCTGCTACAGTACTTACCTTCT-CATAACACAGG--TCCGTGAAAAGGTG  1135

seq1  AACAAGCTG-CTGCTGGGTAAAT  1169
      ||||||||| ||||| |||||||
seq2  AACAAGCTGTCTGCTTGGTAAAT  1158

seq1: chr7_134152980_134154150
seq2: B6Ng01-226D05.g_68_1225 (reverse)

seq1  GCCTGCTCGGAGCCACAGCTAGTCCTCAGGTAGCAGCAGAAGC-TGGGGT  49
      ||||| |||||| |||||||||| |||| |||||||||||||| |||| |
seq2  GCCTG-TCGGAG-CACAGCTAGT-CTCA-GTAGCAGCAGAAGCTTGGGTT  46

seq1  ACAGTCTGCTGTGCAAAGAGGGGTGTGTGAGGCCAGGGTGCAGCTTGGCT  99
      ||||||||||  || ||||||||||||||||| ||||||||||||  || 
seq2  ACAGTCTGCTTGGCCAAGAGGGGTGTGTGAGGTCAGGGTGCAGCT--GC-  93

seq1  TACTGGTCTCCAGTGCACGACACAGAACGAGGGCAGGCTGCCAGCCCCAG  149
      |||| |||| |||||||||||||||||||| |||| |||| |||||||||
seq2  TACT-GTCT-CAGTGCACGACACAGAACGA-GGCAAGCTG-CAGCCCCAG  139

seq1  GTTTTGTTCTGAGACGTCTCAC-TCTGTAGCCCAGGCTGGCCTTGCACAG  198
      ||||   ||||||||||||||| ||||||||||||||||    |||||||
seq2  GTTT--GTCTGAGACGTCTCACTTCTGTAGCCCAGGCTG---CTGCACAG  184

seq1  CAATCTTTCTGTCTT-CCAAATCCTTAGAGTGAACTACTACGTCTGTTCT  247
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAATCTTTCTGTCTTCCCAAATCCTTAGAGTGAACTACTACGTCTGTTCT  234

seq1  TTCCCTTTTTCTTTTCCAGATAGAATCTTGCTATGTAACCCTGGGTAGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTTTCTTTTCCAGATAGAATCTTGCTATGTAACCCTGGGTAGTG  284

seq1  GATTACTACTATGATGAAGTCTATGAAGGCTTCGAACTCAAAGCAAGCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTACTATGATGAAGTCTATGAAGGCTTCGAACTCAAAGCAAGCCT  334

seq1  CCTGCCTCGACTTCCTGAGTGCTGAGACTACTGGTATGGGCCACCATGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCGACTTCCTGAGTGCTGAGACTACTGGTATGGGCCACCATGCT  384

seq1  TGGCTTCGTTCCTTTTCTGGCAACTCAAAGGCAATGTTGATGTATCAGCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCGTTCCTTTTCTGGCAACTCAAAGGCAATGTTGATGTATCAGCC  434

seq1  AAAATCAATGAGCCATGAATCATCACATTTCAGGAATTTTCAAAATAACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAATGAGCCATGAATCATCACATTTCAGGAATTTTCAAAATAACC  484

seq1  TTCGAATGTCTGGCATAGGGAATCTAAATAGCCAGTGGCTGGTTCACAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAATGTCTGGCATAGGGAATCTAAATAGCCAGTGGCTGGTTCACAGT  534

seq1  GCCTCACTGCTCGTGGTCCGCAGGGAGGTTTTCTTTTTTGTTTTAGTAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACTGCTCGTGGTCCGCAGGGAGGTTTTCTTTTTTGTTTTAGTAGT  584

seq1  AGTAGTAATTTTGAGACAGTCTCTGTAGCCCTGGCTGTCCTGGAACTCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAATTTTGAGACAGTCTCTGTAGCCCTGGCTGTCCTGGAACTCAC  634

seq1  TCTGTAGACCAGGTTGGCCTTGAAATCACAAAGATCTGCTGGCTTCTGCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGACCAGGTTGGCCTTGAAATCACAAAGATCTGCTGGCTTCTGCC  684

seq1  TCTGGAGTGCTGGAATTAAGGGCAAGTATTACCACTGCCCAGCTTAGTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTGCTGGAATTAAGGGCAAGTATTACCACTGCCCAGCTTAGTCT  734

seq1  TTTATTATTTTAACTATGTGTCTGTGTGGGAGTGCTCATGTGAGTGCAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTTAACTATGTGTCTGTGTGGGAGTGCTCATGTGAGTGCAGG  784

seq1  GAGTTGAACTTCTGTAAGAGCAGGACCAGCTCTTCGTTGTCAAGCCATCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAACTTCTGTAAGAGCAGGACCAGCTCTTCGTTGTCAAGCCATCT  834

seq1  CTCCTGGACATTCTTAAAGCTGTGTATCTCTGGAGATTTGGGGTTTCTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGACATTCTTAAAGCTGTGTATCTCTGGAGATTTGGGGTTTCTTT  884

seq1  CATAGAGGGTAGGGTCTGAGCACTGATTAATTTTTTAAAAAGTTCTCACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGGGTAGGGTCTGAGCACTGATTAATTTTTTAAAAAGTTCTCACA  934

seq1  ATGACTCAAAGATTGAGAGCCACTGTAGTGAGAATTCTGGAATTGTGGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCAAAGATTGAGAGCCACTGTAGTGAGAATTCTGGAATTGTGGTT  984

seq1  TCTTTAAAAATACAGAAATATTTTAAGAAAGCACTTTTGTTTTAATCCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAAATACAGAAATATTTTAAGAAAGCACTTTTGTTTTAATCCCA  1034

seq1  GGTGTGGGGTGTGGGCTGCATCGGACCGTCCACAGCAGCTGACTATGATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGGGTGTGGGCTGCATCGGACCGTCCACAGCAGCTGACTATGATT  1084

seq1  TGCCTCGTGCTCTAGCAGAGGCATGGTTTTACCAGCTGCAGATAGTTTCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCGTGCTCTAGCAGAGGCATGGTTTTACCAGCTGCAGATAGTTTCT  1134

seq1  GCAACTGTGTGACATTTGGAATTC  1171
      ||||||||||||||||||||||||
seq2  GCAACTGTGTGACATTTGGAATTC  1158