BAC Information

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BAC

Clone NameB6Ng01-226G14
Chromosome7 (Build37)
Map Location 29,641,486 - 29,769,132
singlet/doubletdoublet
Overlap geneLgals7, Capn12, Actn4, Eif3s12, Map4k1
Upstream geneZfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4
Downstream geneRyr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226G14.bB6Ng01-226G14.g
ACCGA040358GA040359
length8351,052
definitionB6Ng01-226G14.b B6Ng01-226G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,641,486 - 29,642,318)(29,768,092 - 29,769,132)
sequence
gaattctctgtcttccaccattctttatttttgcctttgcagcgggatct
tggtgtggagctcaggctggctttgaggtcctggttctctggcctcagtt
tcccaagtgtgggaatacagaagtgtgccgccacacccagcttcctccca
ctctcacatagccaaagatacacaggcatgaaatctaatacatgaggccg
aggatgtgtttagctgatagagtgcctacttagcacgcatggagccctgg
gtttgatgcccagcatagaacaaaatagatataggggtgcatgcctaaga
tctcggcacttgaaaggcagaggtaggagggtcaggggttcaagaccagc
ctcagctctgcaggaagttccaggcctgcctgggctacgtaagagtgtct
caaatttgtttttaaataaatggtttcataacgaacagtttaatgaagca
tctggggaaaagaggctgctttgccctttcacctccccgctgtcctttcc
acagagggcaaacacttttaattggaccttttaagtctacctaacaatgt
aataaccacagaactaatgcacttcctgttccttccagggtttacccatg
gaagtggcactatggacgatagggacatagctttctctctcactgtccca
cgcccctaacaggagcacctgatcactctgttcatgtaatgatttgttga
tttatttttctttttttttttttttttatttttcaaggacttatgtttag
ttatctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctttgggtaggt
gtgtacagggtgtgttgcaggcgcctgagaccaca
gaattccatgcagatccacagcttctgcagcctatagggcgtcaagagag
cagggattacaatggtagtgagacctcccggggctatctcactcccccgc
ccaccacacagtgtcctgttcccatgacagcagaggctgaggatagccag
gaagtgtgtattccagagcaatttttaggtctttgggttccaacccaaga
gcaccccactgccaccccaaggtaatttaggggacagggcagagaaccca
tggcgaagcagacaagacaaagaatcccgggtttgaggaaaagatgccat
tattgaggcagctgagatattatcttgggagccaagaaatttgagagctc
aaattaaagaagcagaataaaaatgggtgatgcagggagcagactagtga
gagatttgattacaacaacgaggagggttctagattagcccttaaaaatt
agcaggcactcagtaagaaaggcagaatttcagattgggaatcagactgg
gatgccccaattaaaagtgaaagtcctcaggttggaagtcaagttagggt
atctgggtcacaaatggtagtttaggagtggagacctggtcagagttaag
gggctggggttgggggatgggctaagacatcaccagaggtaactgccatg
gtaagccacgatgttggcgtgccggcaagttttcagcatgagaatctcct
tctgaagggtggcgacgtcatcatctgtggggaggggccggagagcgaag
gtgggctacaagcgggggcttacagaaatgtccctgtatcccaggaagga
aagggcggggatggggaagaagtttctgggggtgcttctcaccaggctcc
attcttcaccatcttcaaagcaacaaggtccctttagacaacctttgtcg
cgagcctttgtaaaggggaagttggtcatcagggcagacttcatagcttg
ccatcctcagcatctctggaccaagggccaaggcctggcattcctcttac
actcctgcttgccagcctctccccactatcccaagggttgtggtgatagg
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29641486_29642318
seq2: B6Ng01-226G14.b_44_878

seq1  GAATTCTCTGTCTTCCACCATTCTTTATTTTTGCCTTTGCAGCGGGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTCTTCCACCATTCTTTATTTTTGCCTTTGCAGCGGGATCT  50

seq1  TGGTGTGGAGCTCAGGCTGGCTTTGAGGTCCTGGTTCTCTGGCCTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGGAGCTCAGGCTGGCTTTGAGGTCCTGGTTCTCTGGCCTCAGTT  100

seq1  TCCCAAGTGTGGGAATACAGAAGTGTGCCGCCACACCCAGCTTCCTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTGTGGGAATACAGAAGTGTGCCGCCACACCCAGCTTCCTCCCA  150

seq1  CTCTCACATAGCCAAAGATACACAGGCATGAAATCTAATACATGAGGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACATAGCCAAAGATACACAGGCATGAAATCTAATACATGAGGCCG  200

seq1  AGGATGTGTTTAGCTGATAGAGTGCCTACTTAGCACGCATGGAGCCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGTTTAGCTGATAGAGTGCCTACTTAGCACGCATGGAGCCCTGG  250

seq1  GTTTGATGCCCAGCATAGAACAAAATAGATATAGGGGTGCATGCCTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATGCCCAGCATAGAACAAAATAGATATAGGGGTGCATGCCTAAGA  300

seq1  TCTCGGCACTTGAAAGGCAGAGGTAGGAGGGTCAGGGGTTCAAGACCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGCACTTGAAAGGCAGAGGTAGGAGGGTCAGGGGTTCAAGACCAGC  350

seq1  CTCAGCTCTGCAGGAAGTTCCAGGCCTGCCTGGGCTACGTAAGAGTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTCTGCAGGAAGTTCCAGGCCTGCCTGGGCTACGTAAGAGTGTCT  400

seq1  CAAATTTGTTTTTAAATAAATGGTTTCATAACGAACAGTTTAATGAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGTTTTTAAATAAATGGTTTCATAACGAACAGTTTAATGAAGCA  450

seq1  TCTGGGGAAAAGAGGCTGCTTTGCCCTTTCACCTCCCCGCTGTCCTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGAAAAGAGGCTGCTTTGCCCTTTCACCTCCCCGCTGTCCTTTCC  500

seq1  ACAGAGGGCAAACACTTTTAATTGGACCTTTTAAGTCTACCTAACAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGGCAAACACTTTTAATTGGACCTTTTAAGTCTACCTAACAATGT  550

seq1  AATAACCACAGAACTAATGCACTTCCTGTTCCTTCCAGGGTTTACCCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCACAGAACTAATGCACTTCCTGTTCCTTCCAGGGTTTACCCATG  600

seq1  GAAGTGGCACTATGGACGATAGGGACATAGCTTTCTCTCTCACTGTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGCACTATGGACGATAGGGACATAGCTTTCTCTCTCACTGTCCCA  650

seq1  CGCCCCTAACAGGAGCACCTGATCACTCTGTTCATGTAATGATTTGTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCTAACAGGAGCACCTGATCACTCTGTTCATGTAATGATTTGTTGA  700

seq1  TTTATTTTTCTTTTTTTTTTTTTTTTTATTTTTCAAGGACTTATGTTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTCTTTTTTTTTTTTTTTTTATTTTTCAAGGACTTATGTTTAG  750

seq1  TTATCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGTGTAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTATCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGGGTAGGT  800

seq1  GTGTACA-GGTGTG-TGCAGGTGCCTGAGAGCACA  833
      ||||||| |||||| |||||| |||||||| ||||
seq2  GTGTACAGGGTGTGTTGCAGGCGCCTGAGACCACA  835

seq1: chr7_29768092_29769132
seq2: B6Ng01-226G14.g_66_1117 (reverse)

seq1  CTCCT-CCACCACAACCC-TGGGATAGTTGGGGAGAGGCTGGCAAGCAGG  48
      |||||  ||||||||||| |||||||| ||||||||||||||||||||||
seq2  CTCCTATCACCACAACCCTTGGGATAG-TGGGGAGAGGCTGGCAAGCAGG  49

seq1  AGTGTAAGA-GAATGCCAGGCCTTGG-CCTTGGTTCAGAGATGCTGAGGA  96
      ||||||||| |||||||||||||||| ||||||| |||||||||||||||
seq2  AGTGTAAGAGGAATGCCAGGCCTTGGCCCTTGGTCCAGAGATGCTGAGGA  99

seq1  TGGCAAGCTATGGAGTCTG-CCTGATGACCAACTTCCCCTTTAC-AAGGC  144
      |||||||||||| |||||| |||||||||||||||||||||||| |||||
seq2  TGGCAAGCTATGAAGTCTGCCCTGATGACCAACTTCCCCTTTACAAAGGC  149

seq1  TCGCGACAA--GGTGTCTAA--GGACCTGGTGGCTTTGAAGATGGTGAAG  190
      |||||||||  | |||||||  |||||| || ||||||||||||||||||
seq2  TCGCGACAAAGGTTGTCTAAAGGGACCTTGTTGCTTTGAAGATGGTGAAG  199

seq1  -ATGGAGCCTGGTGAG-AGCACCCCCAGAAACTTCTTCCCCATCCCCGCC  238
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATGGAGCCTGGTGAGAAGCACCCCCAGAAACTTCTTCCCCATCCCCGCC  249

seq1  CTTTCCTTCCTGGGATACAGGGACATTTCTGTAAGCCCCCGCTTGTAGCC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTCCTGGGATACAGGGACATTTCTGTAAGCCCCCGCTTGTAGCC  299

seq1  CACCTTCGCTCTCCGGCCCCTCCCCACAGATGATGACGTCGCCACCCTTC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCGCTCTCCGGCCCCTCCCCACAGATGATGACGTCGCCACCCTTC  349

seq1  AGAAGGAGATTCTCATGCTGAAAACTTGCCGGCACGCCAACATCGTGGCT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAGATTCTCATGCTGAAAACTTGCCGGCACGCCAACATCGTGGCT  399

seq1  TACCATGGCAGTTACCTCTGGTGATGTCTTAGCCCATCCCCCAACCCCAG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGGCAGTTACCTCTGGTGATGTCTTAGCCCATCCCCCAACCCCAG  449

seq1  CCCCTTAACTCTGACCAGGTCTCCACTCCTAAACTACCATTTGTGACCCA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTAACTCTGACCAGGTCTCCACTCCTAAACTACCATTTGTGACCCA  499

seq1  GATACCCTAACTTGACTTCCAACCTGAGGACTTTCACTTTTAATTGGGGC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCTAACTTGACTTCCAACCTGAGGACTTTCACTTTTAATTGGGGC  549

seq1  ATCCCAGTCTGATTCCCAATCTGAAATTCTGCCTTTCTTACTGAGTGCCT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGTCTGATTCCCAATCTGAAATTCTGCCTTTCTTACTGAGTGCCT  599

seq1  GCTAATTTTTAAGGGCTAATCTAGAACCCTCCTCGTTGTTGTAATCAAAT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTTTTAAGGGCTAATCTAGAACCCTCCTCGTTGTTGTAATCAAAT  649

seq1  CTCTCACTAGTCTGCTCCCTGCATCACCCATTTTTATTCTGCTTCTTTAA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTAGTCTGCTCCCTGCATCACCCATTTTTATTCTGCTTCTTTAA  699

seq1  TTTGAGCTCTCAAATTTCTTGGCTCCCAAGATAATATCTCAGCTGCCTCA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTCTCAAATTTCTTGGCTCCCAAGATAATATCTCAGCTGCCTCA  749

seq1  ATAATGGCATCTTTTCCTCAAACCCGGGATTCTTTGTCTTGTCTGCTTCG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGCATCTTTTCCTCAAACCCGGGATTCTTTGTCTTGTCTGCTTCG  799

seq1  CCATGGGTTCTCTGCCCTGTCCCCTAAATTACCTTGGGGTGGCAGTGGGG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGTTCTCTGCCCTGTCCCCTAAATTACCTTGGGGTGGCAGTGGGG  849

seq1  TGCTCTTGGGTTGGAACCCAAAGACCTAAAAATTGCTCTGGAATACACAC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTGGGTTGGAACCCAAAGACCTAAAAATTGCTCTGGAATACACAC  899

seq1  TTCCTGGCTATCCTCAGCCTCTGCTGTCATGGGAACAGGACACTGTGTGG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCTATCCTCAGCCTCTGCTGTCATGGGAACAGGACACTGTGTGG  949

seq1  TGGGCGGGGGAGTGAGATAGCCCCGGGAGGTCTCACTACCATTGTAATCC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGGGGGAGTGAGATAGCCCCGGGAGGTCTCACTACCATTGTAATCC  999

seq1  CTGCTCTCTTGACGCCCTATAGGCTGCAGAAGCTGTGGATCTGCATGGAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCTTGACGCCCTATAGGCTGCAGAAGCTGTGGATCTGCATGGAA  1049

seq1  TTC  1041
      |||
seq2  TTC  1052