BAC Information

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BAC

Clone NameB6Ng01-226I22
Chromosome7 (Build37)
Map Location 64,749,343 - 64,750,472
singlet/doubletsinglet
Overlap geneGabra5
Upstream genep, LOC100040839, Gabrg3
Downstream geneGabrb3, EG668807, LOC434189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226I22.bB6Ng01-226I22.g
ACCGA040467GA040468
length5871,120
definitionB6Ng01-226I22.b B6Ng01-226I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttattatagttatgtatggcagactacattacttattagtagaaagtccc
cccacacaatcacttagaataaaagctgagtcactcccatttacaggtat
ttacaatggtttaggtttgggctgtagtttaaggaagaactagaatattg
cattattcatgagaaggttagctagaaaggaactccctaattagagtcta
attagaaccacaacttgggcatgaaagcccttgtcccaggagtgtaaaga
cctcacacctggcttctaagaatatacctgaacttagatagagttgactt
tgtctcagttgttttattgcccagttcctgctagtctttgcatttctctg
tttatgcgtaagagtcattaagcatccggtaacctcattataccttggat
gatgtgtcacctaacttctctattttttttcctgtattgaaagtgttatg
ctcgatttgaaaaaaaaaaaaatcattcagatacacacactcccttgtgt
ccgtgtctgtttgtcgcccgctttttgccgactactgcccacctgtacca
gaaccctgatttctcccgtggattggggggggggggg

gaattccagagctgatttcatttattgaacacatattttaattcattact
ttttattttatgtgcatggctattttgcctgcatgtatgtttctgtaaca
ggtacatgactggtgcctacagaagccagaaaatggtattaggttatttg
aaactggagtgatggaggctgtgaatcaccatgtgggagctaggaattga
atctaagtcctctggaaaaacaggaagtattcttaacttctgagacagct
ctccagctagacacaattttttaagatatagtttaaaatgtctactcaca
ctacttatccataatgacacttctcttggaaaaacttcagtatcttccct
gccctaatataatttcctcctgtactgatctttagttcttcctatagcag
cattcagtgctgctgggtctggaatattttctatgctatattaaataggc
atgtactaagaggagcagaaaaaaagacatcaagaaaagaagatctctag
aaatacctcttagggcagaggcagggcttcatctagcttctgttgcattg
ggagttttctttgcttattttccataatcaacctgataaatgaatcaact
gcaataagtggtcgttcaatgtcctattctcacagtactgaggagattgc
aagtactgtttgctgccctggcacagtgcctccttcacccacagatatct
ggagacttggttatgcctccatcaaacgccaagatctttaaaaactactt
tttatgcaaaaagaaactcccatttggctcaacaaaagcccttgaaaagg
aaaacagccagggcatattagaatctgtgtacagtaagaaacagtgtcac
tgaagagcctcagtggagctatgggggcttcaccaggcaggcctgggcca
ccatctatcttaacactgctgagtgtactcaaggaggagggggtcaaagc
acaatttgtcgatgaactgcttcagaaccagataagacctttgaaggagt
ataatttttttatgaatgaaactaaatctgctatatgacatgtattcaac
aataaaaaatacttctaaatgtgttactcattataatcagcttaaatagc
caaattctctgaaaaacgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64749343_64750472
seq2: B6Ng01-226I22.g_66_1185

seq1  GAATTCCAGAGCTGATTTCATTTATTGAACACATATTTTAATTCATTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGCTGATTTCATTTATTGAACACATATTTTAATTCATTACT  50

seq1  TTTTATTTTATGTGCATGGCTATTTTGCCTGCATGTATGTTTCTGTAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTATGTGCATGGCTATTTTGCCTGCATGTATGTTTCTGTAACA  100

seq1  GGTACATGACTGGTGCCTACAGAAGCCAGAAAATGGTATTAGGTTATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATGACTGGTGCCTACAGAAGCCAGAAAATGGTATTAGGTTATTTG  150

seq1  AAACTGGAGTGATGGAGGCTGTGAATCACCATGTGGGAGCTAGGAATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAGTGATGGAGGCTGTGAATCACCATGTGGGAGCTAGGAATTGA  200

seq1  ATCTAAGTCCTCTGGAAAAACAGGAAGTATTCTTAACTTCTGAGACAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGTCCTCTGGAAAAACAGGAAGTATTCTTAACTTCTGAGACAGCT  250

seq1  CTCCAGCTAGACACAATTTTTTAAGATATAGTTTAAAATGTCTACTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTAGACACAATTTTTTAAGATATAGTTTAAAATGTCTACTCACA  300

seq1  CTACTTATCCATAATGACACTTCTCTTGGAAAAACTTCAGTATCTTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTATCCATAATGACACTTCTCTTGGAAAAACTTCAGTATCTTCCCT  350

seq1  GCCCTAATATAATTTCCTCCTGTACTGATCTTTAGTTCTTCCTATAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAATATAATTTCCTCCTGTACTGATCTTTAGTTCTTCCTATAGCAG  400

seq1  CATTCAGTGCTGCTGGGTCTGGAATATTTTCTATGCTATATTAAATAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTGCTGCTGGGTCTGGAATATTTTCTATGCTATATTAAATAGGC  450

seq1  ATGTACTAAGAGGAGCAGAAAAAAAGACATCAAGAAAAGAAGATCTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTAAGAGGAGCAGAAAAAAAGACATCAAGAAAAGAAGATCTCTAG  500

seq1  AAATACCTCTTAGGGCAGAGGCAGGGCTTCATCTAGCTTCTGTTGCATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTCTTAGGGCAGAGGCAGGGCTTCATCTAGCTTCTGTTGCATTG  550

seq1  GGAGTTTTCTTTGCTTATTTTCCATAATCAACCTGATAAATGAATCAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTTCTTTGCTTATTTTCCATAATCAACCTGATAAATGAATCAACT  600

seq1  GCAATAAGTGGTCGTTCAATGTCCTATTCTCACAGTACTGAGGAGATTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAGTGGTCGTTCAATGTCCTATTCTCACAGTACTGAGGAGATTGC  650

seq1  AAGTACTGTTTGCTGCCCTGGCACAGTGCCTCCTTCACCCACAGATATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTGTTTGCTGCCCTGGCACAGTGCCTCCTTCACCCACAGATATCT  700

seq1  GGAGACTTGGTTATGCCTCCATCAAACGCCAAGATCTTTAAAAACTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTTGGTTATGCCTCCATCAAACGCCAAGATCTTTAAAAACTACTT  750

seq1  TTTATGCAAAAAGAAACTCCCATTTGGCTCAACAAAAGCCCTTGAAAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCAAAAAGAAACTCCCATTTGGCTCAACAAAAGCCCTTGAAAAGG  800

seq1  AAAACAGCCAGGGCATATTAGAATCTGTGTACAGTAAGAAACAGTGTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCCAGGGCATATTAGAATCTGTGTACAGTAAGAAACAGTGTCAC  850

seq1  TGAAGAGCCTCAGGTGGAGCTATGGGGGCTTCACCAGGCAGGCCT-GGCC  899
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  TGAAGAGCCTCA-GTGGAGCTATGGGGGCTTCACCAGGCAGGCCTGGGCC  899

seq1  ACCATCTATCTTAACACTGCTGAGTGTACTCAAGGAGGAGGGGGTCAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTATCTTAACACTGCTGAGTGTACTCAAGGAGGAGGGGGTCAAAG  949

seq1  CACAA-TTGTCGATGAACTGCTTCAGGAACCAGATAAAGACCTTTGAAGG  998
      ||||| ||||||||||||||||||| ||||||||| ||||||||||||||
seq2  CACAATTTGTCGATGAACTGCTTCA-GAACCAGAT-AAGACCTTTGAAGG  997

seq1  AGTATAA-TTTTTTATGAAATGAAACTAAATCTGCTATTATTGACATGTA  1047
      ||||||| ||||||||| ||||||||||||||||||||   |||||||||
seq2  AGTATAATTTTTTTATG-AATGAAACTAAATCTGCTAT--ATGACATGTA  1044

seq1  ATTTCAACA--TAAAAATACTTCTAAATGTTGGTAACTTCAATTATAATC  1095
        |||||||   ||||||||||||||||||  || |||   |||||||||
seq2  --TTCAACAATAAAAAATACTTCTAAATGT--GTTACT--CATTATAATC  1088

seq1  AAGGCTAAAATAGCAAAATTCTCTGAAAACACGGA  1130
      |  ||| ||||||| |||||||||||||| |||||
seq2  A--GCTTAAATAGCCAAATTCTCTGAAAA-ACGGA  1120


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