BAC Information

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BAC

Clone NameB6Ng01-226J02
Chromosome7 (Build37)
Map Location 64,630,354 - 64,814,885
singlet/doubletdoublet
Overlap geneGabrg3, Gabra5
Upstream genep, LOC100040839
Downstream geneGabrb3, EG668807, LOC434189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226J02.bB6Ng01-226J02.g
ACCGA040471GA040472
length951223
definitionB6Ng01-226J02.b B6Ng01-226J02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,630,354 - 64,631,304)(64,814,663 - 64,814,885)
sequence
gaattcctgcagaagaggaacacagcagcggactgtctctccatggacct
gcctaagagcagatctagattaaatgtgtctggggtaatttctacccatt
acctatctcatcatatagtgtaacaaaacacgacttcgtctttatcagca
tgactgtaatggtatggctctgtaggtaacaccactgctgacaccaataa
tctatactctgagaaatgttcaaacttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttcttcttttttggttgttcgagacagggtttctctgtata
gctcaggctgtcctgaaactcactttgtagaccaggctggcctcgaactg
agaaatccgcctgcctctgcctcccgagtgctgggattaaaggcatgcac
caccacacccggatgttcaaacttcttgaaacccttaagataaattttct
ttggttatttccttcttttccacaattacattgttgaaaaattcacctta
atgtagcccttcctgactcataggactagacctacttcccagaaaatgtg
atcctatatggccctagattgacagaggccatggctttagcattacttaa
aatgatggatggatacccagaaactaaaaccatacttagtaattttaata
gagagaatagctataaactatagatgctaatataatgattacaattttgt
gacatggaaaataatcaaaaggacactgccacataagcagatcttcatct
atctctttatcactgacaacaaagttaggggagaatttagcatatgtggt
gttggagctatagagttgtgggcactggacaaataccatgttttttctcg
gttggtggttaattccagggagtcttggggggactggttaaatcatagtg
g
agcacagtggtgctgcagagggaattggaactttttctgatttaaaactt
aaatcccacctgcatgaacgtgttgtacaacaacaacaaccaaaaaaaaa
aactttgcatgggttgatttgattagcatgcacagtcagaaatacttggt
gatacttgggtcattaggttccactttccttcatcttcatcccctgaact
caacataagaatgcagggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64630354_64631304
seq2: B6Ng01-226J02.b_45_994

seq1  GAATTCCTGCAGAAGAGGAACACAGCAGCGGACTGTCTCTCCATGGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCAGAAGAGGAACACAGCAGCGGACTGTCTCTCCATGGACCT  50

seq1  GCCTAAGAGCAGATCTAGATTAAATGTGTCTGGGGTAATTTCTACCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAGAGCAGATCTAGATTAAATGTGTCTGGGGTAATTTCTACCCATT  100

seq1  ACCTATCTCATCATATAGTGTAACAAAACACGACTTCGTCTTTATCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCTCATCATATAGTGTAACAAAACACGACTTCGTCTTTATCAGCA  150

seq1  TGACTGTAATGGTATGGCTCTGTAGGTAACACCACTGCTGACACCAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTAATGGTATGGCTCTGTAGGTAACACCACTGCTGACACCAATAA  200

seq1  TCTATACTCTGAGAAATGTTCAAACTTCTTCTTCTTCTTCTTCTTCTTCT  250
      ||||||||||||||||||||||||   |||||||||||||||||||||||
seq2  TCTATACTCTGAGAAATGTTCAAA---CTTCTTCTTCTTCTTCTTCTTCT  247

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  297

seq1  TTCTTCTTCTTCTTCTTCTTTTTTGGTTGTTCGAGACAGGGTTTCTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTTTTTGGTTGTTCGAGACAGGGTTTCTCTGT  347

seq1  ATAGCTCAGGCTGTCCTGAAACTCACTTTGTAGACCAGGCTGGCCTCGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCAGGCTGTCCTGAAACTCACTTTGTAGACCAGGCTGGCCTCGAA  397

seq1  CTGAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATG  447

seq1  CACCACCACACCCGGATGTTCAAACTTCTTGAAACCCTTAAGATAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACACCCGGATGTTCAAACTTCTTGAAACCCTTAAGATAAATTT  497

seq1  TCTTTGGTTATTTCCTTCTTTTCCACAATTACATTGTTGAAAAATTCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTTATTTCCTTCTTTTCCACAATTACATTGTTGAAAAATTCACC  547

seq1  TTAATGTAGCCCTTCCTGACTCATAGGACTAGACCTACTTCCCAGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTAGCCCTTCCTGACTCATAGGACTAGACCTACTTCCCAGAAAAT  597

seq1  GTGATCCTATATGGCCCTAGATTGACAGAGGCCATGGCTTTAGCATTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCTATATGGCCCTAGATTGACAGAGGCCATGGCTTTAGCATTACT  647

seq1  TAAAATGATGGATGGATACCCAGAAACTAAAACCATACTTAGTAA-TTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAAAATGATGGATGGATACCCAGAAACTAAAACCATACTTAGTAATTTTA  697

seq1  ATAGAGAGAATAGCTATAAACTATAGATGCTAATATAATGATTACAA-TT  748
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATAGAGAGAATAGCTATAAACTATAGATGCTAATATAATGATTACAATTT  747

seq1  TGTGACATGGAAAATAATCAAAAGGACACTGCCACATAAGCAGATCTTCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATGGAAAATAATCAAAAGGACACTGCCACATAAGCAGATCTTCA  797

seq1  TCTATCTCTTTATCACTGACAACAAAGTTA-GGGAGAGTTTAGCATATGT  847
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  TCTATCTCTTTATCACTGACAACAAAGTTAGGGGAGAATTTAGCATATGT  847

seq1  GGTGTTGGAGCTATAGAG-TGTGGGCACTGAGAAAATACCATGTTTTTTC  896
      |||||||||||||||||| |||||||||||   |||||||||||||||||
seq2  GGTGTTGGAGCTATAGAGTTGTGGGCACTGGACAAATACCATGTTTTTTC  897

seq1  TTCGGTTGGTGGTTTAGTTCCAGGGAGTTTTGGGGGTACTGGTTAGTTCA  946
       ||||||||||| ||| ||||||||||| ||||||| ||||||||  |||
seq2  -TCGGTTGGTGG-TTAATTCCAGGGAGTCTTGGGGGGACTGGTTAAATCA  945

seq1  TAGTG  951
      |||||
seq2  TAGTG  950

seq1: chr7_64814663_64814885
seq2: B6Ng01-226J02.g_74_296 (reverse)

seq1  ACTCCCCCTGCATTCTTATGTTGAGTTCAGGGGATGAAGATGAAGGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCCTGCATTCTTATGTTGAGTTCAGGGGATGAAGATGAAGGAAAG  50

seq1  TGGAACCTAATGACCCAAGTATCACCAAGTATTTCTGACTGTGCATGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCTAATGACCCAAGTATCACCAAGTATTTCTGACTGTGCATGCTA  100

seq1  ATCAAATCAACCCATGCAAAGTTTTTTTTTTTGGTTGTTGTTGTTGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATCAACCCATGCAAAGTTTTTTTTTTTGGTTGTTGTTGTTGTACA  150

seq1  ACACGTTCATGCAGGTGGGATTTAAGTTTTAAATCAGAAAAAGTTCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTTCATGCAGGTGGGATTTAAGTTTTAAATCAGAAAAAGTTCCAAT  200

seq1  TCCCTCTGCAGCACCACTGTGCT  223
      |||||||||||||||||||||||
seq2  TCCCTCTGCAGCACCACTGTGCT  223