BAC Information

Click to search

BAC

Clone NameB6Ng01-226K02
Chromosome7 (Build37)
Map Location 10,926,457 - 10,926,873
singlet/doubletsinglet
Overlap genenone
Upstream geneV2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521, LOC628525
Downstream geneLOC100042206, Nlrp4d, LOC100042214, V1re10, Zik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1, LOC635187, LOC100042997, LOC100042293, Zscan4d, LOC628737, LOC676750, LOC672893, LOC546931, LOC675762, Zscan4e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226K02.bB6Ng01-226K02.g
ACCGA040517GA040518
length4111,189
definitionB6Ng01-226K02.b B6Ng01-226K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aggtgaagggcttagacacaaatactaggtccatttctgcctacttctct
ggggttctcttaattctccatgtcacaaccataaatataaacataaatgc
atccataccctccatactttcaggtgtccaacccttatactgcttacaca
ttattattttctctttgtagctgggagggctcatgagctcctcctacaag
gtctccagcccaggtaacaatctcttgtggttgctctacttacttcaaag
tcagaaaaatccagataaagtcagtatgcttgtcgggagatacaggtaaa
ggaaattggaggatttggataagtaatgatttttgttttccttaaaaaaa
tcagaaagaaggaagggaaggaaaaggaagggaagggaagggaagggaag
ggaagggaagg
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaaaagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacagaatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgcagcctcagaagctctgtggctcttgccgggaaggtggc
tggttgtctggagctgaggatggtgccgccccagaatctctgcgactctc
tcgcccgtcccagaaacggctggcactctgtattccacacggtcacccgt
gcagcctgccctccgcggagtcccggagccaagaaggctcccgccggcgc
ctgtgccacaaacctctcaggccaggcagacccccgtgctctcaccagga
aggtggccggctgtctggagctgaagatggcgccgcccagaagctctgcg
actctctcgcccgtcccagaaacagctggcactctgtattccacacggtc
acccgtgcagcctgccctccgcggagtcccgggagccaagaaaggctccc
gccggcgcctgtgccacaaacctctcagccaggcagaccccgtgctctca
ccaggaaagtggccggctgtctggagctaaagatggcgccgccagaagct
ctgcgactctctcgcccgtcccagaaaacagctggcactctgtatccaac
acggtcacccgtgcagcctgcctctgcggagtccccggagccaagaagct
ccgcggcgctgtgcaacaaacctctcagcaggcagaccctcgtgcctctc
cacagagtgcggctgtcctgagctgaaatggcgcaaagcttgcaattctt
tcgccgttcagaaaaaagcactggcagcactcctgtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_10926457_10926873
seq2: B6Ng01-226K02.b_43_459

seq1  GAATTCAGGTGAAGGGCTTAGACACAAATACTAGGTCCATTTCTGCCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGAAGGGCTTAGACACAAATACTAGGTCCATTTCTGCCTAC  50

seq1  TTCTCTGGGGTTCTCTTAATTCTCCATGTCACAACCATAAATATAAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGGGTTCTCTTAATTCTCCATGTCACAACCATAAATATAAACAT  100

seq1  AAATGCATCCATACCCTCCATACTTTCAGGTGTCCAACCCTTATACTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATCCATACCCTCCATACTTTCAGGTGTCCAACCCTTATACTGCT  150

seq1  TACACATTATTATTTTCTCTTTGTAGCTGGGAGGGCTCATGAGCTCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTATTATTTTCTCTTTGTAGCTGGGAGGGCTCATGAGCTCCTCC  200

seq1  TACAAGGTCTCCAGCCCAGGTAACAATCTCTTGTGGTTGCTCTACTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGTCTCCAGCCCAGGTAACAATCTCTTGTGGTTGCTCTACTTACT  250

seq1  TCAAAGTCAGAAAAATCCAGATAAAGTCAGTATGCTTGTCGGGAGATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTCAGAAAAATCCAGATAAAGTCAGTATGCTTGTCGGGAGATACA  300

seq1  GGTAAAGGAAATTGGAGGATTTGGATAAGTAATGATTTTTGTTTTCCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGGAAATTGGAGGATTTGGATAAGTAATGATTTTTGTTTTCCTTA  350

seq1  AAAAAATCAGAAAGAAGGAAGGGAAGGAAAAGGAAGGGAAGGGAAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCAGAAAGAAGGAAGGGAAGGAAAAGGAAGGGAAGGGAAGGGAA  400

seq1  GGGAAGGGAAGGGAAGG  417
      |||||||||||||||||
seq2  GGGAAGGGAAGGGAAGG  417