BAC Information

Click to search

BAC

Clone NameB6Ng01-226K04
Chromosome7 (Build37)
Map Location 6,648,268 - 6,648,780
singlet/doubletsinglet
Overlap geneZim1
Upstream geneLOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2
Downstream genePeg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226K04.bB6Ng01-226K04.g
ACCGA040521GA040522
length5071,193
definitionB6Ng01-226K04.b B6Ng01-226K04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcttcttatgtgggtgtgcgtgagcttgtgttctactttgtaactgtatc
tgtttttgtatacggatgagctgtagttgtgagttttgcccaactgcctg
actgtgctgatgtggtcaagtgtgattatatgatcttgtatttgtgtgtt
gggaaatgtgtctgtatttgagcccgactatgtgtctcattctgtggatc
tactaatatagattttatgtaataacactgtgagtgtgaatttttaaatt
taattaattaattaattttgtgtgtttgtatgtgtgtgtaggtctttgga
caactcacaacagcctgttttttcctactatgtgggtcccagcgatggaa
ctcgagttataaggcttggcagcaatcgcctttaccagctgaaccagcta
gctggtcccagattgtgagttcatagtatgcctggcagagggaggttgtg
cagattttaggttgtatttgtatctgtggtatggcggggaatgtgttggg
atggttg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttccacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctccaaa
tggaggagctagagaaagtacccaagagctaaagggatctgcaaccctat
aaggtggaacaacattatgagctaaccagtaccccggagctctgacctct
agctgcataatatatcaaagaatgggcctagtcgcaatcactggaaagaa
gaggtcaatgacctggcaaactttatattgccccagtacaggatacaagc
aaaaaaggggaatggtgtggccagggagactgtgggcgaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6648268_6648780
seq2: B6Ng01-226K04.b_47_559 (reverse)

seq1  CAACCATCCCAACACATTCCCCGCCATACCACAGATACAAATACAACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATCCCAACACATTCCCCGCCATACCACAGATACAAATACAACCTA  50

seq1  AAATCTGCACAACCTCCCTCTGCCAGGCATACTATGAACTCACAATCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGCACAACCTCCCTCTGCCAGGCATACTATGAACTCACAATCTGG  100

seq1  GACCAGCTAGCTGGTTCAGCTGGTAAAGGCGATTGCTGCCAAGCCTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCTAGCTGGTTCAGCTGGTAAAGGCGATTGCTGCCAAGCCTTATA  150

seq1  ACTCGAGTTCCATCGCTGGGACCCACATAGTAGGAAAAAACAGGCTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGAGTTCCATCGCTGGGACCCACATAGTAGGAAAAAACAGGCTGTTG  200

seq1  TGAGTTGTCCAAAGACCTACACACACATACAAACACACAAAATTAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTCCAAAGACCTACACACACATACAAACACACAAAATTAATTAA  250

seq1  TTAATTAAATTTAAAAATTCACACTCACAGTGTTATTACATAAAATCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAATTTAAAAATTCACACTCACAGTGTTATTACATAAAATCTAT  300

seq1  ATTAGTAGATCCACAGAATGAGACACATAGTCGGGCTCAAATACAGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAGATCCACAGAATGAGACACATAGTCGGGCTCAAATACAGACAC  350

seq1  ATTTCCCAACACACAAATACAAGATCATATAATCACACTTGACCACATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCAACACACAAATACAAGATCATATAATCACACTTGACCACATCA  400

seq1  GCACAGTCAGGCAGTTGGGCAAAACTCACAACTACAGCTCATCCGTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTCAGGCAGTTGGGCAAAACTCACAACTACAGCTCATCCGTATAC  450

seq1  AAAAACAGATACAGTTACAAAGTAGAACACAAGCTCACGCACACCCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGATACAGTTACAAAGTAGAACACAAGCTCACGCACACCCACAT  500

seq1  AAGAAGAGAATTC  513
      |||||||||||||
seq2  AAGAAGAGAATTC  513