BAC Information

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BAC

Clone NameB6Ng01-227F01
Chromosome7 (Build37)
Map Location 147,813,350 - 147,813,871
singlet/doubletsinglet
Overlap genenone
Upstream gene9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46
Downstream geneOlfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227F01.bB6Ng01-227F01.g
ACCGA041016GA041017
length992851
definitionB6Ng01-227F01.b B6Ng01-227F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatacctaatggttgagaaacacctaaaaaaatg
ttcaacatccctactcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacacttctccattgccgatg
ggattgcaagcttgtacaaccactctggaaatcaatctggtggttcctca
gaaaattggacatagtattaccagaggatccagcaatagctctcctgggc
gtacacccagaagatgctccaatatgtaataaggacacatgctccactat
gtttatagcagccttatttataatagccagaagctggaaagaacccacat
gttccccaatagagtaatggatacagaaaatgtggtacatttacacaatg
gagcactatgcagctattaaaaacaatgaatttatgaaataccccactct
tatcaatgaacaggtcatcaaaaaacaatcaagcagaaatccaattagcc
aactgctacgcacactccagtgaagtttgcttggcaggctgagaggcttg
ggagcactcacgaggcaaagagtttcacagaaactcacctcctggaactt
tggcgttctcataacccatatactcataccctatcctcgcgttagtctgg
tgtatggatccacgtgctctcttttagtattattttattataagtgcctt
ttaagattgaattctgacatagctaagcctttgccagtgttccaacatcc
cacaaaatccttgaagccaacaaacttggaattcagtaggaattcagtga
gaaggttatgagaacgccaaaggtatgtggattgtcctacagcaggccag
tttttatgagaaaaagcccaagctctgcaaaggtgccaaagggacctcct
cctcctggatcacaggcttctccatttgggacgggtcgcatg
gaattctgtggactgtatcttgtgtattctgtatgaaagggttttttgat
tgtttgttttggtttttggttaatatgattagtaagtacataaccatgca
tgtccttttgggtctgagttaacctcactcaggatgatattttctagttc
catccatttgcctgcaaaagtcaggatgtcctcactcttaatagctaagt
aatattccattgtgtagatgaaccacattttctgtatccattcttctgtc
atgggatatctgggttgtttgtagcttctgactaccacaaataaggctgc
tatgaacatagtggaacacatgccccgatggcatggtggggcatcttttg
ggtatattctcaagagtagtatagttgagtcttcaggtagttctattccc
aattttcttaggaacctccatattgatttccagagtggttgtaccagttt
tcaatcccaccagcaatggagacaaatcggccaactactaattggaaaaa
aaaaaaacttcactaaccccacatctgatagagtgttaatatccaaaata
tgtaaagaactcaagaaatcaaaattaccaaaaaaccaaacaaacacaat
caaaaaatggggtatagaactaaactgagaattaacaatggaggaatctc
gaatggctgagaaacacctaaagaaatgttcaaaagtccttagtgatcag
agaaatgcaaatcaaaaggacccctgcgattccactttacaccagtcaga
atggctaagatcaaaacctcgggtgacaacacatgttggagaggatgtgg
agaagaggaaaattcatggtattttctacagagtttttctcatatttctt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147813350_147813871
seq2: B6Ng01-227F01.g_394_919

seq1  CCGATGGCATGGTGGGGCATCTTTTGGGTATATTCTCAAGAGTAGTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGGCATGGTGGGGCATCTTTTGGGTATATTCTCAAGAGTAGTATAG  50

seq1  TTGAGTCTTCAGGTAGTTCTATTCCCAATTTTCTTAGGAACCTCCATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCTTCAGGTAGTTCTATTCCCAATTTTCTTAGGAACCTCCATATT  100

seq1  GATTTCCAGAGTGGTTGTACCAGTTTTCAATCCCACCAGCAATGGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCAGAGTGGTTGTACCAGTTTTCAATCCCACCAGCAATGGAGACA  150

seq1  AATCGGCCAACTACTAATTGGAAAAAAAAAAAACTTCACTAACCCCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGGCCAACTACTAATTGGAAAAAAAAAAAACTTCACTAACCCCACAT  200

seq1  CTGATAGAGTGTTAATATCCAAAATATGTAAAGAACTCAAGAAATC-AAA  249
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTGATAGAGTGTTAATATCCAAAATATGTAAAGAACTCAAGAAATCAAAA  250

seq1  TTACCAAAAAACCAAAC-AACACAATCAAAAAATGGGGTATAGAACTAAA  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTACCAAAAAACCAAACAAACACAATCAAAAAATGGGGTATAGAACTAAA  300

seq1  CTGAGAATTAACAATGGAGGAATCTCGAATGGCTGAGAAACACCTAAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATTAACAATGGAGGAATCTCGAATGGCTGAGAAACACCTAAAGA  350

seq1  AATGTTC-AAAGTCCTTAGTGATCAGAGAAATGCAAATCAAAAGGA-CCC  396
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  AATGTTCAAAAGTCCTTAGTGATCAGAGAAATGCAAATCAAAAGGACCCC  400

seq1  TGCGATTCCACTTTACACCAGTCAGAATGGCTAAGATCAAAACCTCGGGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGATTCCACTTTACACCAGTCAGAATGGCTAAGATCAAAACCTCGGGT  450

seq1  GACAACACATGTTGGAGAGGATGTGGAGAAGAGGAAAATTCAATGGTA-T  495
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  GACAACACATGTTGGAGAGGATGTGGAGAAGAGGAAAATTC-ATGGTATT  499

seq1  TTCTACAGAGTTTTTCTCATATTTCTT  522
      |||||||||||||||||||||||||||
seq2  TTCTACAGAGTTTTTCTCATATTTCTT  526