BAC Information

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BAC

Clone NameB6Ng01-227J08
Chromosome7 (Build37)
Map Location 50,436,426 - 50,585,082
singlet/doubletdoublet
Overlap geneEG668620, Zfp715
Upstream geneEG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589
Downstream geneSiglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227J08.bB6Ng01-227J08.g
ACCGA041219GA041220
length7871,121
definitionB6Ng01-227J08.b B6Ng01-227J08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,436,426 - 50,437,099)(50,583,952 - 50,585,082)
sequence
gaattccactttctttttttttttcttttttttttttggtttttcgatgc
agggtttctctttataaccctggctgtcctggaattcactttgtagacca
ggctggcctcaaactcagaaatccgcctgcctctgcctcctgagtgctgg
gattaaaagcctgcgccaccacgcccggtgcactttctattttttaaaga
tttatttatttattatatataaatagactctggctgtcttcaggcacaga
tctcactacagatggttgtaagccattaggtggttcatgggagttgaact
caggacctctagaagaacagtcttaaatgctgagccatctctctagcctg
agaattgcaacttcaatgtctgtagaaaattctgtttgaaatttgaggga
aattgcattgactttgtacattgcttttggtaccatggccatactaacta
tgttttttggttgtctgttttcaaaattgttttttctgagtgatgagctt
gtggtcctaggacttgttccatctaccaggctcgccttgaactcagagag
ttctgcctgcctctgcctgtggtcctgtgtcttgaaggcattcctgcaac
tctttcaggcttgacccttactaatctgtgaaatggaaaaaagaccactg
ggtgagggtcctctgacttccatcccttttattgggcatttaaaaatgaa
atgggacttgagacaaaattgacttcactgaccaactctgatactgccat
attcacagcccagagagggatggggggataagtgggg
gaattcactatgtagactaggctggacttgaactcacagagatctgcttg
cttctgcatccaaagtgttgagattaaagaccagtggcaccacacacacc
catctcttaagagaaaattttaattcctaagatcactttgcaaaaatctt
acatgagtaagccagtggacatggtataatgatcaataactggcagtcag
ccagaattaaaatgccttcccagtgagaaatgacttcacacgattagaga
ttaataaagggaaaagctatttactaatagtgtttgactggttttaacta
aagcacaaagagaaccaaccttgaacagaaatatttgccagcttatctag
cctttagtcttctgcattccacatatgcttatacagccatatacattaca
catgcttatacaggcttctacattccatacatgccatctacatatgggtc
caggccctaggttacagttggaataattttatagggacaagaaactgcaa
gtctgaccacttgacagatgggagatttccatagcaaagatatcaacagg
attattttttaactaaaccagtgtagttgttgttttcaaatagttgttac
caagggtcagcctgcccacctggtagaactatggttttgaggggaggggg
caggggaataagagcacagggactcaatggtagactgggacttaatgatg
gttgtcaccctgtgctgccccttgagtggcccttaggaggtatgttcttg
gacttggggtgggcagtcagtcttggtgaataaacatcagcagaaacatt
tttctcagcaaccctaaacttcaattatggtataattttttttcttatgg
tttctaacacacctgggttagtgaactatttaccttccaggcataatgga
aggcagcacttctttagctaatttctattttgtgtaattaattttcttgt
tgcagaaatattaaaaatgacccaccaactctctgcactcctgcttctct
gaacccgccactctctggcccgcgggccacgttaccactctagacttggt
gcaggcggccacaacattatgtctccactggttcccacagttctgttccc
acttcataacaatagatctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50436426_50437099
seq2: B6Ng01-227J08.b_155_828

seq1  CTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAAGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAAGCCTG  50

seq1  CGCCACCACGCCCGGTGCACTTTCTATTTTTTAAAGATTTATTTATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCACCACGCCCGGTGCACTTTCTATTTTTTAAAGATTTATTTATTTAT  100

seq1  TATATATAAATAGACTCTGGCTGTCTTCAGGCACAGATCTCACTACAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAAATAGACTCTGGCTGTCTTCAGGCACAGATCTCACTACAGAT  150

seq1  GGTTGTAAGCCATTAGGTGGTTCATGGGAGTTGAACTCAGGACCTCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTAAGCCATTAGGTGGTTCATGGGAGTTGAACTCAGGACCTCTAGA  200

seq1  AGAACAGTCTTAAATGCTGAGCCATCTCTCTAGCCTGAGAATTGCAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGTCTTAAATGCTGAGCCATCTCTCTAGCCTGAGAATTGCAACTT  250

seq1  CAATGTCTGTAGAAAATTCTGTTTGAAATTTGAGGGAAATTGCATTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTGTAGAAAATTCTGTTTGAAATTTGAGGGAAATTGCATTGACT  300

seq1  TTGTACATTGCTTTTGGTACCATGGCCATACTAACTATGTTTTTTGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACATTGCTTTTGGTACCATGGCCATACTAACTATGTTTTTTGGTTG  350

seq1  TCTGTTTTCAAAATTGTTTTTTCTGAGTGATGAGCTTGTGGTCCTAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTCAAAATTGTTTTTTCTGAGTGATGAGCTTGTGGTCCTAGGAC  400

seq1  TTGTTCCATCTACCAGGCTCGCCTTGAACTCAGAGAGTTCTGCCTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCATCTACCAGGCTCGCCTTGAACTCAGAGAGTTCTGCCTGCCTC  450

seq1  TGCCTGTGGTCCTGTGTCTTGAAGGCATTCCTGCAACTCTTTCAGGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGGTCCTGTGTCTTGAAGGCATTCCTGCAACTCTTTCAGGCTTG  500

seq1  ACCCTTACTAATCTGTGAAATGGAAAAAAGACCACTGGGTGAGGGTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTACTAATCTGTGAAATGGAAAAAAGACCACTGGGTGAGGGTCCTC  550

seq1  TGACTTCCATCCCTTTTATTGGGCATTTAAAAATGAAATGGGACTTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCCATCCCTTTTATTGGGCATTTAAAAATGAAATGGGACTTGAGA  600

seq1  CAAAATTGACTTCACTGACCAACTCTGATACTGCCATATTCACAGCCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGACTTCACTGACCAACTCTGATACTGCCATATTCACAGCCCAG  650

seq1  AGAGGGATGGGGGGATAAGTGGGG  674
      ||||||||||||||||||||||||
seq2  AGAGGGATGGGGGGATAAGTGGGG  674

seq1: chr7_50583952_50585082
seq2: B6Ng01-227J08.g_64_1184 (reverse)

seq1  GCAGATCTATTTGGTTATTGGAATGTGGG-ACAGAACTGGTGGGACCCCG  49
      |||||||||||  |||||  ||| ||||| |||||||| |||||| || |
seq2  GCAGATCTATT--GTTAT--GAA-GTGGGAACAGAACT-GTGGGAACCAG  44

seq1  TGGAGACATAATGTTGTGGCCCGCTGGCACCAGTCCTAGAGTGGTAACGT  99
      ||||||||||||||||||| ||||  ||||||   |||||||||||||||
seq2  TGGAGACATAATGTTGTGG-CCGCCTGCACCAAGTCTAGAGTGGTAACGT  93

seq1  GGCCCGGCGGGGCCAGAGAGTTGGCGGGTTCAGAGAAGCAGGAGTGCAGA  149
      ||||||   ||||||||||| |||||||||||||||||||||||||||||
seq2  GGCCCG--CGGGCCAGAGAG-TGGCGGGTTCAGAGAAGCAGGAGTGCAGA  140

seq1  GAGTTGGTGGGTTCATTTTTTAATATTTCCTGCAACAAGAAAATTAATTA  199
      ||||||||||| ||| |||||||||||| |||||||||||||||||||||
seq2  GAGTTGGTGGG-TCA-TTTTTAATATTT-CTGCAACAAGAAAATTAATTA  187

seq1  CACAAAATAGAAATTAGCTAAAGAAGTGCTGCCTTCCATTATGCCTGGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATAGAAATTAGCTAAAGAAGTGCTGCCTTCCATTATGCCTGGAA  237

seq1  GGTAAATAGTTCACTAA-CCAGGTGTGTTAGAAACCATAAG-AAAAAAAT  297
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  GGTAAATAGTTCACTAACCCAGGTGTGTTAGAAACCATAAGAAAAAAAAT  287

seq1  TATACCATAATTGAAGTTTAGGGTTGCTGAGAAAAATGTTTCTGCTGATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCATAATTGAAGTTTAGGGTTGCTGAGAAAAATGTTTCTGCTGATG  337

seq1  TTTATTCACCAAGACTGACTGCCCACCCCAAGTCCAAGAACATACCTCCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCACCAAGACTGACTGCCCACCCCAAGTCCAAGAACATACCTCCT  387

seq1  AAGGGCCACTCAAGGGGCAGCACAGGGTGACAACCATCATTAAGTCCCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCACTCAAGGGGCAGCACAGGGTGACAACCATCATTAAGTCCCAG  437

seq1  TCTACCATTGAGTCCCTGTGCTCTTATTCCCCTGCCCCCTCCCCTCAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCATTGAGTCCCTGTGCTCTTATTCCCCTGCCCCCTCCCCTCAAAA  487

seq1  CCATAGTTCTACCAGGTGGGCAGGCTGACCCTTGGTAACAACTATTTGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTTCTACCAGGTGGGCAGGCTGACCCTTGGTAACAACTATTTGAA  537

seq1  AACAACAACTACACTGGTTTAGTTAAAAAATAATCCTGTTGATATCTTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACTACACTGGTTTAGTTAAAAAATAATCCTGTTGATATCTTTG  587

seq1  CTATGGAAATCTCCCATCTGTCAAGTGGTCAGACTTGCAGTTTCTTGTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAAATCTCCCATCTGTCAAGTGGTCAGACTTGCAGTTTCTTGTCC  637

seq1  CTATAAAATTATTCCAACTGTAACCTAGGGCCTGGACCCATATGTAGATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAATTATTCCAACTGTAACCTAGGGCCTGGACCCATATGTAGATG  687

seq1  GCATGTATGGAATGTAGAAGCCTGTATAAGCATGTGTAATGTATATGGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATGGAATGTAGAAGCCTGTATAAGCATGTGTAATGTATATGGCT  737

seq1  GTATAAGCATATGTGGAATGCAGAAGACTAAAGGCTAGATAAGCTGGCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGCATATGTGGAATGCAGAAGACTAAAGGCTAGATAAGCTGGCAA  787

seq1  ATATTTCTGTTCAAGGTTGGTTCTCTTTGTGCTTTAGTTAAAACCAGTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTGTTCAAGGTTGGTTCTCTTTGTGCTTTAGTTAAAACCAGTCA  837

seq1  AACACTATTAGTAAATAGCTTTTCCCTTTATTAATCTCTAATCGTGTGAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTATTAGTAAATAGCTTTTCCCTTTATTAATCTCTAATCGTGTGAA  887

seq1  GTCATTTCTCACTGGGAAGGCATTTTAATTCTGGCTGACTGCCAGTTATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCTCACTGGGAAGGCATTTTAATTCTGGCTGACTGCCAGTTATT  937

seq1  GATCATTATACCATGTCCACTGGCTTACTCATGTAAGATTTTTGCAAAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTATACCATGTCCACTGGCTTACTCATGTAAGATTTTTGCAAAGT  987

seq1  GATCTTAGGAATTAAAATTTTCTCTTAAGAGATGGGTGTGTGTGGTGCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTAGGAATTAAAATTTTCTCTTAAGAGATGGGTGTGTGTGGTGCCA  1037

seq1  CTGGTCTTTAATCTCAACACTTTGGATGCAGAAGCAAGCAGATCTCTGTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTTTAATCTCAACACTTTGGATGCAGAAGCAAGCAGATCTCTGTG  1087

seq1  AGTTCAAGTCCAGCCTAGTCTACATAGTGAATTC  1131
      ||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGTCCAGCCTAGTCTACATAGTGAATTC  1121