BAC Information

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BAC

Clone NameB6Ng01-228E14
Chromosome7 (Build37)
Map Location 86,177,824 - 86,332,576
singlet/doubletdoublet
Overlap geneAcan, Hapln3, Mfge8
Upstream geneA330068G13Rik, Ntrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20
Downstream geneAbhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228E14.bB6Ng01-228E14.g
ACCGA041735GA041736
length1,177954
definitionB6Ng01-228E14.b B6Ng01-228E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,177,824 - 86,178,986)(86,331,627 - 86,332,576)
sequence
gaattccttcttctctcctctgtgttccttgtctgaaaatcctaaaagtc
cctcccctgtccccttgcctaaccaatggccactagctctttatgaatta
atcgaaaaaccaattggggacaaggaacctcatcatctggacacttagat
tcccatgtgattttaggagccaaattaagacgaagcattagaaccaatct
ccaagaggcaatatcagttgatatcacacatataaataaaaccttttagg
gagacctcaatttcattccagatagtaatacacttacatcctaaccaagt
ctgaaggagatgcagctcacacagtggcatgaaaccgcaattgtcatgtt
tgtgcggcacaaaaaaaggttcaaggcctttcattgcattcagttatttt
ccctagctgccgccacagccaaggatatcaaatgttcgagagcattcata
agacagaaaggtctgagcatcccttacttaaattcagccagaatacatct
ttcgggatcaaatatgggtttggcctcccctgaagcacacaagcaaagga
cacctggaaactccccggtgttctctgaggaaagagagattgagtcttca
tgggtaccaagcagtctggtatcaccactgcagagtgaattctgacctga
attgaggattcctggatggcaggaagtccaggtcacattgtggtaggagg
tgcgtgtagaggacggagtccttgctcttgaagaacaaggagagcttgtg
agatgtgaggcactcacttctgctgaactttaccacttcttctgcccatg
gacatccaccagctgttgtgagccctttctcagtgaagcaagcatttcaa
tctccttacaacacatccctcatttcatttctcacatattttttaaattg
aaaaatcgctgccaccaatttagttctcctgcctaaacatatagtcatac
cacttctttaatcagaacctctgaaaactccagtcagtgtgcacactgtg
ttaatggcattctgacttgcacttagagatttcaacacagtggccctcaa
attgtctgcctagaacttcagacttaagtttgtctaaggagtagagttat
gtgctcttcgagtcaggccaattctgtggttcagctcctctttctacagc
aaccagaaacactggtgggttctggtt
gaattctcagctccttcttcagcaccttgtctgcctgcatgccgccatgc
ttcccaccatgttgacattggactaaacctctgaaactgtaagccagcac
caactaaatgtttttctttataagagttgcacggtcaccaagtcccttca
tagccaaacacctaagacagggaacattaagagatgaagtttatgagaaa
aacgttgtagcatcttaattaacataagttttgtttagtaagatgaaatg
caattgtccgactgcctggccacacactagagttctgtgtaaggtaattg
tgtgatcagttgttttttacatcatactcctgcctaagaaactaccttct
agaagctttgtaaaggcagttaaactctgcatctcatagacaacgtaaaa
gagaaatagttaaacttggaagagagagagagaaatagactcccaatggg
tcctttttataagattatccaatagtgtcccgcagacaccaatcctgcac
aactttcccaaacctctgagtttggtgacaggctatttggtaatctcctt
tcattaagaaaatggataattagggcatagaaagacatgttggcattcaa
gaagacaggcctttgtccagttggggtttctattactgtgatgagacacc
acgagcaaaagcagctggaggagaaaaagcttcatttggctttacacttc
cacatcactggtaatccctgaagtcaggacaggaactcagacagggcagg
aacctggaggcaggagctgatgcagaatgcctggagcttacaggctttct
cctcatggcttgctcagcctgctttctttcttttctttttctttttcttt
ttttttttcctttttttttttttttttttgggtttttcgaaaacaagggt
tcctctgtatagccctgggctgtcctggaaacctacttttgtagaccatg
gcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86177824_86178986
seq2: B6Ng01-228E14.b_48_1223

seq1  GAATTCCTTCTTCTCTCCTCTGTGTTCCTTGTCTGAAAATCCTAAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTCTCTCCTCTGTGTTCCTTGTCTGAAAATCCTAAAAGTC  50

seq1  CCTCCCCTGTCCCCTTGCCTAACCAATGGCCACTAGCTCTTTATGAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTGTCCCCTTGCCTAACCAATGGCCACTAGCTCTTTATGAATTA  100

seq1  ATCGAAAAACCAATTGGGGACAAGGAACCTCATCATCTGGACACTTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAAAAACCAATTGGGGACAAGGAACCTCATCATCTGGACACTTAGAT  150

seq1  TCCCATGTGATTTTAGGAGCCAAATTAAGACGAAGCATTAGAACCAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTGATTTTAGGAGCCAAATTAAGACGAAGCATTAGAACCAATCT  200

seq1  CCAAGAGGCAATATCAGTTGATATCACACATATAAATAAAACCTTTTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGGCAATATCAGTTGATATCACACATATAAATAAAACCTTTTAGG  250

seq1  GAGACCTCAATTTCATTCCAGATAGTAATACACTTACATCCTAACCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTCAATTTCATTCCAGATAGTAATACACTTACATCCTAACCAAGT  300

seq1  CTGAAGGAGATGCAGCTCACACAGTGGCATGAAACCGCAATTGTCATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGATGCAGCTCACACAGTGGCATGAAACCGCAATTGTCATGTT  350

seq1  TGTGCGGCACAAAAAAAGGTTCAAGGCCTTTCATTGCATTCAGTTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGGCACAAAAAAAGGTTCAAGGCCTTTCATTGCATTCAGTTATTTT  400

seq1  CCCTAGCTGCCGCCACAGCCAAGGATATCAAATGTTCGAGAGCATTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCTGCCGCCACAGCCAAGGATATCAAATGTTCGAGAGCATTCATA  450

seq1  AGACAGAAAGGTCTGAGCATCCCTTACTTAAATTCAGCCAGAATACATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAAGGTCTGAGCATCCCTTACTTAAATTCAGCCAGAATACATCT  500

seq1  TTCGGGATCAAATATGGGTTTGGCCTCCCCTGAAGCACACAAGCAAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGGATCAAATATGGGTTTGGCCTCCCCTGAAGCACACAAGCAAAGGA  550

seq1  CACCTGGAAACTCCCCGGTGTTCTCTGAGGAAAGAGAGATTGAGTCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGAAACTCCCCGGTGTTCTCTGAGGAAAGAGAGATTGAGTCTTCA  600

seq1  TGGGTACCAAGCAGTCTGGTATCACCACTGCAGAGTGAATTCTGACCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACCAAGCAGTCTGGTATCACCACTGCAGAGTGAATTCTGACCTGA  650

seq1  ATTGAGGATTCCTGGATGGCAGGAAGTCCAGGTCACATTGTGGTAGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGATTCCTGGATGGCAGGAAGTCCAGGTCACATTGTGGTAGGAGG  700

seq1  TGCGTGTAGAGGACGGAGTCCTTGCTCTTGAAGAACAAGGAGAGCTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGTAGAGGACGGAGTCCTTGCTCTTGAAGAACAAGGAGAGCTTGTG  750

seq1  AGATGTGAGGCACTCAC-TCTGCTGAACTTTACCACTTCTTCTGCCCATG  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGATGTGAGGCACTCACTTCTGCTGAACTTTACCACTTCTTCTGCCCATG  800

seq1  GACATCCACCAGCTG-TGTGAGCCC-TTCTCAGTGAAGCAAGCATTTCAA  847
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  GACATCCACCAGCTGTTGTGAGCCCTTTCTCAGTGAAGCAAGCATTTCAA  850

seq1  TCTCCTTACAACACAT-CCTCATTTCATTTCTCACATA-TTTTTAAATTG  895
      |||||||||||||||| ||||||||||||||||||||| |||||||||||
seq2  TCTCCTTACAACACATCCCTCATTTCATTTCTCACATATTTTTTAAATTG  900

seq1  AAAAATTCGCTGCCACCAATTTAGTTCTCCTGCCTAAACATATAGTCATA  945
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAA-TCGCTGCCACCAATTTAGTTCTCCTGCCTAAACATATAGTCATA  949

seq1  CCACTTCCTT-ATCAGAACCTCTGAAAACTCCAGTCAGTGTGCACACTGT  994
      ||||||| || |||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCTTTAATCAGAACCTCTGAAAACTCCAGTCAGTGTGCACACTGT  999

seq1  G-TAATGGCATTCTTGACATGCACTTAGAGATTTCCACACAGTGGCCCCC  1043
      | ||||||||||| |||| |||||||||||||||| |||||||||||| |
seq2  GTTAATGGCATTC-TGACTTGCACTTAGAGATTTCAACACAGTGGCCCTC  1048

seq1  AAATTGTCTGCCTAGACTTCCAGAC-TAAGTTTGTCT-AGGAGTTAAGAG  1091
      ||||||||||||||||  | ||||| ||||||||||| ||||||  ||||
seq2  AAATTGTCTGCCTAGAACTTCAGACTTAAGTTTGTCTAAGGAGT--AGAG  1096

seq1  -TATGTGCTC-TCGAGCCAGGCCA--TCTGGTGTTCAGC-CCTCTTTCTA  1136
       ||||||||| ||||| |||||||  ||||  ||||||| ||||||||||
seq2  TTATGTGCTCTTCGAGTCAGGCCAATTCTGTGGTTCAGCTCCTCTTTCTA  1146

seq1  CAGCAACCAG-AACACTGGT--GTTCTGGT  1163
      |||||||||| |||||||||  ||||||||
seq2  CAGCAACCAGAAACACTGGTGGGTTCTGGT  1176

seq1: chr7_86331627_86332576
seq2: B6Ng01-228E14.g_70_1023 (reverse)

seq1  TAGCC-TGGTCTAC-AAAGTGAGTTT-CAGGACAG-CCAGGGCTATACAG  46
      ||||| |||||||| |||||  |||| |||||||| ||||||||||||||
seq2  TAGCCATGGTCTACAAAAGTAGGTTTCCAGGACAGCCCAGGGCTATACAG  50

seq1  AGAAACCCT--GTTTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAAGAAA  94
      || ||||||   ||||||||||||  ||||||||||||||||||| ||||
seq2  AGGAACCCTTGTTTTCGAAAAACC-CAAAAAAAAAAAAAAAAAAAGGAAA  99

seq1  AAAAAAAAGAAAAAAGAAAAAGAAAAAGAAAGAAAGCAGGCTGAGCAAGC  144
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  AAAAAAAAG-AAAAAGAAAAAG-AAAAGAAAGAAAGCAGGCTGAGCAAGC  147

seq1  CATGAGGAGAAAGCCTGTAAGCTCCAGGCCTTCTGCATCAGCTCCTGCCT  194
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATGAGGAGAAAGCCTGTAAGCTCCAGGCATTCTGCATCAGCTCCTGCCT  197

seq1  CCAGGTTCCTGCCCTGTCTGAGTTCCTGTCCTGACTTCAGGGATTACCAG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTCCTGCCCTGTCTGAGTTCCTGTCCTGACTTCAGGGATTACCAG  247

seq1  TGATGTGGAAGTGT-AAGCCAAATGAAGCTTTTTCTCCTCCAGCTGCTTT  293
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGATGTGGAAGTGTAAAGCCAAATGAAGCTTTTTCTCCTCCAGCTGCTTT  297

seq1  TGCTCGTGGTGTCTCATCACAGTAATAGAAACCCCAACTGGACAAAGGCC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGTGGTGTCTCATCACAGTAATAGAAACCCCAACTGGACAAAGGCC  347

seq1  TGTCTTCTTGAATGCCAACATGTCTTTCTATGCCCTAATTATCCATTTTC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTTGAATGCCAACATGTCTTTCTATGCCCTAATTATCCATTTTC  397

seq1  TTAATGAAAGGAGATTACCAAATAGCCTGTCACCAAACTCAGAGGTTTGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAAAGGAGATTACCAAATAGCCTGTCACCAAACTCAGAGGTTTGG  447

seq1  GAAAGTTGTGCAGGATTGGTGTCTGCGGGACACTATTGGATAATCTTATA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTGTGCAGGATTGGTGTCTGCGGGACACTATTGGATAATCTTATA  497

seq1  AAAAGGACCCATTGGGAGTCTATTTCTCTCTCTCTCTTCCAAGTTTAACT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACCCATTGGGAGTCTATTTCTCTCTCTCTCTTCCAAGTTTAACT  547

seq1  ATTTCTCTTTTACGTTGTCTATGAGATGCAGAGTTTAACTGCCTTTACAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTTTTACGTTGTCTATGAGATGCAGAGTTTAACTGCCTTTACAA  597

seq1  AGCTTCTAGAAGGTAGTTTCTTAGGCAGGAGTATGATGTAAAAAACAACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTAGAAGGTAGTTTCTTAGGCAGGAGTATGATGTAAAAAACAACT  647

seq1  GATCACACAATTACCTTACACAGAACTCTAGTGTGTGGCCAGGCAGTCGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACACAATTACCTTACACAGAACTCTAGTGTGTGGCCAGGCAGTCGG  697

seq1  ACAATTGCATTTCATCTTACTAAACAAAACTTATGTTAATTAAGATGCTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGCATTTCATCTTACTAAACAAAACTTATGTTAATTAAGATGCTA  747

seq1  CAACGTTTTTCTCATAAACTTCATCTCTTAATGTTCCCTGTCTTAGGTGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTTTTTCTCATAAACTTCATCTCTTAATGTTCCCTGTCTTAGGTGT  797

seq1  TTGGCTATGAAGGGACTTGGTGACCGTGCAACTCTTATAAAGAAAAACAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTATGAAGGGACTTGGTGACCGTGCAACTCTTATAAAGAAAAACAT  847

seq1  TTAGTTGGTGCTGGCTTACAGTTTCAGAGGTTTAGTCCAATGTCAACATG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGGTGCTGGCTTACAGTTTCAGAGGTTTAGTCCAATGTCAACATG  897

seq1  GTGGGAAGCATGGCGGCATGCAGGCAGACAAGGTGCTGAAGAAGGAGCTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGCATGGCGGCATGCAGGCAGACAAGGTGCTGAAGAAGGAGCTG  947

seq1  AGAATTC  950
      |||||||
seq2  AGAATTC  954