BAC Information

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BAC

Clone NameB6Ng01-228F10
Chromosome7 (Build37)
Map Location 34,808,671 - 34,809,664
singlet/doubletsinglet
Overlap geneAbpb
Upstream geneLOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpa
Downstream geneLOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464, Kctd15, Chst8, Pepd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228F10.bB6Ng01-228F10.g
ACCGA041775GA041776
length996787
definitionB6Ng01-228F10.b B6Ng01-228F10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgacaaatggagtttctccatagatacttaaaagttatact
catactagaaattatcaggacccaggaaataggggggttgtggtattgca
gtattcatgagaaggtctgctaaagtagaacccctggtggtgggcttaac
aatagactagctttatacctggctcccttcttagtggcagaggcctggtc
cctgacttcttttgatgcatacattgcttttctattgtgtcactgtaact
tcgtagattgtatctcgtctggtttctgggtattctgctgtataaaaagt
ttgatgcttgacctgacaaaatacattccgattctacacaatctcctgtg
tgcaactgtctgtcatttctgccaactccttgcccatctgcacccagaga
cccatccatgcagacaaagggacccagagggtctgcggcaacacatagct
cccagaaggcaggaggcttccttaagaagcaagctctggctacacactgg
tgaattcgaggcctgggtcacaggcatcagggtcagtctgtgcaagatgg
cctcctaatgtgctgtttggtttgaatctggttccttgtgttctctaaga
gttcctgcactggaaacgtagttcccgtcatagggtctcaagatatgatg
tgatggagaagcatgagacaactggaaaggtgaataggactctcgagtgt
gtgggaagggacacatgctatagactatgtgaatgctggagacagccaca
aactgacttgccatgtgattaattctatttttctgagtatctgtggtgac
tgggtctctcatagaggctaaaaaaatgatgctgcaggacttgtggaacc
tggagccttcaaatgattagttctctttataatactggagccatggttat
ttatcatagcattatgataaagattagtaccctttacttttttcagcctc
tatactctattaattaagatagcctgtacctgttgagtccttccat
gaattccccaatgaaaagacatagactaatagactggctacaaaaacagg
acccaacattctgctgcttacagggaacccatcacagggaaaaagacaga
cactacctcagagtgaaaggctggaaaacaattttccaagcaaatggtat
gaagaaacaagctggagtagccattctaatatcggataaaattgacttcc
aacccaaagttatcaaaaaagacaaggagggacacttgatactcatcaaa
ggtaaaatcctccaagaggaactctcaattctgaatatctacgctccaaa
tgcaagggcatccacactcattaaagacacattagtaaagctcaaagcac
acattgcacctcacacaataatagtgggagacttcaacacaccactttca
tcaatggacagatcgtggaaaaagaaactaaacagggacacagtgaaact
aacagaaattatgaaacaaatggatctgatagatatctacagaacatttt
atcctaaaacaaaaggatataccttcttctcagcacctcacgggaccttc
tccaaaattgtccatataattggccacaaaacaggcctcaacagatacaa
aaatattgaaattgtctcatgtatactatcagaccaccatggcctaaggc
tgatcttcaataacaacataaataatggaaagccaacattcacatggaaa
ctgaacagcactcttcttaatgataccttggtcaaggaaggaataaagaa
agaaattaaagactttttagagtttaattgaaaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34808671_34809664
seq2: B6Ng01-228F10.b_50_1045 (reverse)

seq1  ATGGAAGG-CCCAACAGGTACAGGCTATCTCA--TTATAGAGTAT--GCG  45
      |||||||| | ||||||||||||||||||| |  | |||||||||    |
seq2  ATGGAAGGACTCAACAGGTACAGGCTATCTTAATTAATAGAGTATAGAGG  50

seq1  CTGAAAAAAGTAAAGGGTACTATTCTTTTTCATAATGCTATGATAAAATA  95
      |||||||||||||||||||||| ||||| ||||||||||||||| |||||
seq2  CTGAAAAAAGTAAAGGGTACTAATCTTTATCATAATGCTATGAT-AAATA  99

seq1  ACCATGGCT-CAGTATTTATAAAGAAGAACTAATCATTTTGAAGGCTCCA  144
      ||||||||| ||||| |||||||| ||||||||||| |||||||||||||
seq2  ACCATGGCTCCAGTA-TTATAAAG-AGAACTAATCA-TTTGAAGGCTCCA  146

seq1  GG-TCCAC-AGTCCTGCAGCCTCATTTTTTTTAGCCTCTATGGAGGACCC  192
      || ||||| ||||||||||| ||| |||||||||||||||||   |||||
seq2  GGTTCCACAAGTCCTGCAGCATCA-TTTTTTTAGCCTCTATGAGAGACCC  195

seq1  AGTCACCAACAGATACTCAG-AAAATAGAATTAATCACATGGCCAAGTCA  241
      ||||||| |||||||||||| ||||||||||||||||||||| |||||||
seq2  AGTCACC-ACAGATACTCAGAAAAATAGAATTAATCACATGG-CAAGTCA  243

seq1  GTTTGTGGCTGTCTCCAGCATTCACCTAGTCTATAGCATGTGTCCCTTCC  291
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTTTGTGGCTGTCTCCAGCATTCACATAGTCTATAGCATGTGTCCCTTCC  293

seq1  CACACACTCGAGAGTCCTATTCACCTTTCCAGTTGTCTCATGCTTCTCCA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTCGAGAGTCCTATTCACCTTTCCAGTTGTCTCATGCTTCTCCA  343

seq1  TCACATCATATCTTGAGACCCTATGACGGGAACTACGTTTCCAGTGCAGG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCATATCTTGAGACCCTATGACGGGAACTACGTTTCCAGTGCAGG  393

seq1  AACTCTTAGAGAACACAAGGAACCAGATTCAAACCAAACAGCACATTAGG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTAGAGAACACAAGGAACCAGATTCAAACCAAACAGCACATTAGG  443

seq1  AGGCCATCTTGCACAGACTGACCCTGATGCCTGTGACCCAGGCCTCGAAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATCTTGCACAGACTGACCCTGATGCCTGTGACCCAGGCCTCGAAT  493

seq1  TCACCAGTGTGTAGCCAGAGCTTGCTTCTTAAGGAAGCCTCCTGCCTTCT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGTGTGTAGCCAGAGCTTGCTTCTTAAGGAAGCCTCCTGCCTTCT  543

seq1  GGGAGCTATGTGTTGCCGCAGACCCTCTGGGTCCCTTTGTCTGCATGGAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTATGTGTTGCCGCAGACCCTCTGGGTCCCTTTGTCTGCATGGAT  593

seq1  GGGTCTCTGGGTGCAGATGGGCAAGGAGTTGGCAGAAATGACAGACAGTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCTGGGTGCAGATGGGCAAGGAGTTGGCAGAAATGACAGACAGTT  643

seq1  GCACACAGGAGATTGTGTAGAATCGGAATGTATTTTGTCAGGTCAAGCAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGGAGATTGTGTAGAATCGGAATGTATTTTGTCAGGTCAAGCAT  693

seq1  CAAACTTTTTATACAGCAGAATACCCAGAAACCAGACGAGATACAATCTA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTTTATACAGCAGAATACCCAGAAACCAGACGAGATACAATCTA  743

seq1  CGAAGTTACAGTGACACAATAGAAAAGCAATGTATGCATCAAAAGAAGTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGTTACAGTGACACAATAGAAAAGCAATGTATGCATCAAAAGAAGTC  793

seq1  AGGGACCAGGCCTCTGCCACTAAGAAGGGAGCCAGGTATAAAGCTAGTCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCAGGCCTCTGCCACTAAGAAGGGAGCCAGGTATAAAGCTAGTCT  843

seq1  ATTGTTAAGCCCACCACCAGGGGTTCTACTTTAGCAGACCTTCTCATGAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAAGCCCACCACCAGGGGTTCTACTTTAGCAGACCTTCTCATGAA  893

seq1  TACTGCAATACCACAACCCCCCTATTTCCTGGGTCCTGATAATTTCTAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAATACCACAACCCCCCTATTTCCTGGGTCCTGATAATTTCTAGT  943

seq1  ATGAGTATAACTTTTAAGTATCTATGGAGAAACTCCATTTGTCAGAAGAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTATAACTTTTAAGTATCTATGGAGAAACTCCATTTGTCAGAAGAA  993

seq1  TTC  994
      |||
seq2  TTC  996