MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-228H07
Chromosome	7 (Build37)
Map Location	139,863,453 - 140,009,884
singlet/doublet	doublet
Overlap gene	2310007H09Rik, A930008G19Rik
Upstream gene	LOC100043679, Gpr26, Cpxm2, 4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2
Downstream gene	2010208K18Rik, C430003P19Rik, Zranb1, Ctbp2, LOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043679 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043679
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Gpr26 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233919 MGI:2441758
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpxm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55987 MGI:1926006
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4631426J05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77590 MGI:1924840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043682 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	LOC100043683 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins pseudo : _no_value

name	Oat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18242 MGI:97394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkx1-2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20231 MGI:104806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310007H09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76429 MGI:1923679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930008G19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77938 MGI:1925188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2010208K18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72096 MGI:1919346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C430003P19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109359 MGI:1926116
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zranb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:360216 MGI:106441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctbp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13017 MGI:1201686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	4930404H21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73808 MGI:1921058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	2700050L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214764 MGI:1919831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mmp21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214766 MGI:2664387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uros (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22276 MGI:98917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bccip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66165 MGI:1913415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx32 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101437 MGI:2141813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043695 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1194 ESTs, 6 Proteins

name	Fank1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66930 MGI:1914180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr26 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802803 GeneID:233919 MGI:2441758
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 26 transcript_id : NM_173410.2

name	Cpxm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348888 GeneID:55987 MGI:1926006
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase X 2 (M14 family) transcript_id : NM_018867.4

name	4631426J05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801162 GeneID:77590 MGI:1924840
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4631426J05 gene transcript_id : NM_029935.3

name	LOC100043682 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257811 GeneID:100043682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100043682 transcript_id : XM_001480735.1

name	Oat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032004 GeneID:18242 MGI:97394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ornithine aminotransferase transcript_id : NM_016978.2

name	Nkx1-2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982826 GeneID:20231 MGI:104806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NK1 transcription factor related, locus 2 (Drosophila) transcript_id : NM_009123.2

name	2310007H09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778743 GeneID:76429 MGI:1923679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310007H09 gene transcript_id : NM_029609.1

name	A930008G19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059501 GeneID:77938 MGI:1925188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930008G19 gene transcript_id : NM_212473.1

name	A930008G19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059505 GeneID:77938 MGI:1925188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930008G19 gene transcript_id : NM_175268.4

name	2010208K18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059503 GeneID:72096 MGI:1919346
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010208K18 gene transcript_id : NM_028095.1

name	C430003P19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574118 GeneID:109359 MGI:1926116
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C430003P19 gene transcript_id : NM_198017.1

name	Zranb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46409651 GeneID:360216 MGI:106441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, RAN-binding domain containing 1 transcript_id : NM_207302.1

name	Ctbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922610 GeneID:13017 MGI:1201686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-terminal binding protein 2 transcript_id : NM_009980.4

name	4930404H21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115749425 GeneID:73808 MGI:1921058
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930404H21 gene transcript_id : NM_028654.1

name	LOC100043237 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257734 GeneID:100043237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043237 transcript_id : XM_001479801.1

name	2700050L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54261742 GeneID:214764 MGI:1919831
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700050L05 gene transcript_id : NM_178115.3

name	2700050L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122450 GeneID:214764 MGI:1919831
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700050L05 gene transcript_id : NM_145995.1

name	Mmp21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23308682 GeneID:214766 MGI:2664387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 21 transcript_id : NM_152944.1

name	Uros (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83921610 GeneID:22276 MGI:98917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uroporphyrinogen III synthase transcript_id : NM_009479.2

name	Bccip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031956 GeneID:66165 MGI:1913415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BRCA2 and CDKN1A interacting protein transcript_id : NM_025392.2

name	Dhx32 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326536 GeneID:101437 MGI:2141813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 32 transcript_id : NM_133941.2

name	LOC100043695 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257814 GeneID:100043695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1194 ESTs, 6 Proteins product : similar to ribosomal protein S13 transcript_id : XM_001480802.1

name	Fank1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982667 GeneID:66930 MGI:1914180
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type 3 and ankyrin repeat domains 1 transcript_id : NM_025850.2

name	Gpr26 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734158 CCDS:CCDS21920.1 GeneID:233919 MGI:2441758
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 26 protein_id : NP_775586.1

name	Cpxm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18466804 CCDS:CCDS21921.1 GeneID:55987 MGI:1926006
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0004180 - carboxypeptidase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence TAS] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IDA] codon_start : 1 exception : mismatches in translation note : carboxypeptidase X2; metallocarboxypeptidase 2 product : carboxypeptidase X 2 (M14 family) protein_id : NP_061355.2

name	4631426J05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560040 CCDS:CCDS21922.1 GeneID:77590 MGI:1924840
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0050656 - 3'-phosphoadenosine 5'-phosphosulfate binding [Evidence ISS]; GO:0050659 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0019319 - hexose biosynthesis [Evidence ISS] codon_start : 1 note : GalNAc4S-6ST; GalNAc 4-sulfate 6-O-sulfotransferase product : N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase protein_id : NP_084211.2

name	LOC100043682 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257812 GeneID:100043682
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480785.1

name	Oat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393866 CCDS:CCDS21923.1 GeneID:18242 MGI:97394
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004587 - ornithine-oxo-acid transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : ornithine aminotransferase protein_id : NP_058674.1

name	Nkx1-2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677853 CCDS:CCDS21924.1 GeneID:20231 MGI:104806
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : spinal cord axial homeobox gene 1 product : NK1 transcription factor related, locus 2 protein_id : NP_033149.1

name	2310007H09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70778744 CCDS:CCDS21925.1 GeneID:76429 MGI:1923679
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC76429 protein_id : NP_083885.1

name	A930008G19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542068 CCDS:CCDS21926.1 GeneID:77938 MGI:1925188
definition	codon_start : 1 product : hypothetical protein LOC77938 protein_id : NP_780477.2

name	A930008G19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059502 CCDS:CCDS21926.1 GeneID:77938 MGI:1925188
definition	codon_start : 1 product : hypothetical protein LOC77938 protein_id : NP_997638.1

name	2010208K18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059504 CCDS:CCDS21927.1 GeneID:72096 MGI:1919346
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC72096 protein_id : NP_082371.1

name	C430003P19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574119 CCDS:CCDS21928.1 GeneID:109359 MGI:1926116
definition	codon_start : 1 product : hypothetical protein LOC109359 protein_id : NP_932134.1

name	Zranb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46409652 CCDS:CCDS21929.1 GeneID:360216 MGI:106441
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 function : putative cysteine-peptidase product : TRAF-binding protein protein_id : NP_997185.1

name	Ctbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753548 CCDS:CCDS21930.1 GeneID:13017 MGI:1201686
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IDA]; GO:0003714 - transcription corepressor activity [Evidence IPI] [Evidence IDA] GO_process : GO:0006564 - L-serine biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IPI] codon_start : 1 product : C-terminal binding protein 2 protein_id : NP_034110.1

name	4930404H21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115749426 GeneID:73808 MGI:1921058
definition	codon_start : 1 product : hypothetical protein LOC73808 protein_id : NP_082930.1

name	LOC100043237 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257735 GeneID:100043237
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479851.1

name	2700050L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54261743 CCDS:CCDS21932.1 GeneID:214764 MGI:1919831
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC214764 isoform 2 protein_id : NP_835216.2

name	2700050L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122451 GeneID:214764 MGI:1919831
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC214764 isoform 1 protein_id : NP_666107.1

name	Mmp21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23308683 CCDS:CCDS21933.1 GeneID:214766 MGI:2664387
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence ISS]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : matrix metalloproteinase 21 protein_id : NP_694423.1

name	Uros (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678519 CCDS:CCDS21934.1 GeneID:22276 MGI:98917
definition	GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IDA] GO_process : GO:0006783 - heme biosynthesis [Evidence IEA]; GO:0006779 - porphyrin biosynthesis [Evidence IDA] codon_start : 1 note : URO-synthase; uroporphyrinogen-III synthase; hydroxymethylbilane hydrolyase (cyclizing) product : uroporphyrinogen III synthase protein_id : NP_033505.1

name	Bccip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134031957 CCDS:CCDS21935.1 GeneID:66165 MGI:1913415
definition	GO_component : GO:0019908 - nuclear cyclin-dependent protein kinase holoenzyme complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0019207 - kinase regulator activity [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0000079 - regulation of cyclin-dependent protein kinase activity [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : BRCA2 and CDKN1A interacting protein protein_id : NP_079668.2

name	Dhx32 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527160 CCDS:CCDS21936.1 GeneID:101437 MGI:2141813
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004386 - helicase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 product : helicase DDX32 protein_id : NP_598702.1

name	LOC100043695 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257815 GeneID:100043695
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480852.1

name	Fank1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385328 CCDS:CCDS21937.1 GeneID:66930 MGI:1914180
definition	codon_start : 1 note : germ cell-specific 1 product : fibronectin type 3 and ankyrin repeat domains 1 protein_id : NP_080126.1

name	LOC100043679 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043679
definition	number : 1 pseudo : _no_value

name	LOC668747 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668747
definition	number : 2 pseudo : _no_value

name	LOC668747 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668747
definition	number : 1 pseudo : _no_value

name	LOC100043683 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257813 GeneID:100043683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_034823.1

clone name	MSMg01-537F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335F05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-357C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155F13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-146I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-183L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280L05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-228H07.b	B6Ng01-228H07.g
ACC	GA041864	GA041865
length	1,031	701
definition	B6Ng01-228H07.b	B6Ng01-228H07.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(139,863,453 - 139,864,460)	(140,009,189 - 140,009,884)
sequence	gaattcaattcccagcaactacatggtgactcacaaccatctctaatggg atcagatggcctcttctggcctgtctgaagacagcggctgtgtcctcata cacataaaataaataaaaataaatctcagaaaagaaaaccagctacataa acaaagacgccctgtgaagaatcctggtgatcatggaggtgcttccaccc cagtgaggtcagcacgctggctttgacagcgagatgctgctgttagggcg aattgagtaacttagatttcttacaactctgggtgaatctacacatacct tgggaagtttactgacagtgtatcaagaaagaaaataacccttgcatgta gcatactaaggagatggcttcagtgacccaacgtagatgctaacaatggg ccttgaacacatgttacatggggagggagtttcagagttgcagaggtagg ggcttggagtcagccagctgtctgtctgtctgtctgtctgtctgtctgta catgggtgtcagcatccttcatgcaggcatttgtggagtatctgctaggg gtgaatgctggacacacgccctgcttccccagtgggaggtggcagggtat ggagtgattctgggctgggaggtatgcccagctgtggaatcggagagagt tttcttcctgtttctaaatttccaaaagttttggtagagttacattattg tttattaaggaaaaggtttggatatttgaaaaaggaagccaccttggtcg atctcatgtggcctgggaagccattttggcagctgctctgggctggaagg cctgacctgccaagctgtgagagaactcgtgactggtgcaactgtttgtg ctgttgggctctgcctctgacttcccctgaccacgcccctgttccagcct ggcactcccattcaggcaccagaccagagagcaccttgagtgaagccacc atctggtcatagaataacagtgctgggtcccacagcaatgccgtctacct tgtaggtggtggccttgtgccctgtcaccac	gaattcaggatttggtttgtacatttaagctctgtgaaatcatgaactat atctggttcttctctaatgaaaggacaatgtcctttgtagggggaaatag gaaggctcagtagtttttaacatatcagtaagggtgaattaaaaaaaagt ttgctttgaggcttttcttttcttcttttctctctctctttccctctctc tctctctctctctctctctctctctctctctctttctttctttctttctt tctttctttcttgtgacactaacaactacttcagttgccatcatcacaga tacaccagaggtgtgctcttgttaattatttcttacatcgtttacttctg tgtgtgtgactcttttgcttatatgtgtgtatgttgtactgcatgtgtgc ttggtgcctgtagaggccagaagagggcatcttatcctctggaattggag ttaatgggttaatgctgggtatggaacccaggtcctttgcaataacaata agtgctctaaactgctgagtaatctctccagcaccccagcctttgttttt tgaagtttagtattagaatagtaaggttggtttagttcattttctagtaa ccgaacacctttgttgcactttttttctttttatttactgtgaataaagc tttaatgcctgtttttcatccctgtgcttttcttataagcatattaataa t
quality values	Open. Hide. 58 38 27 27 62 31 23 44 62 62 49 62 37 27 62 47 62 62 62 62 62 47 42 54 62 62 62 62 59 59 62 22 12 30 16 18 23 19 21 28 25 28 32 40 51 59 59 62 62 62 49 59 59 59 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 49 34 42 50 38 36 48 32 33 45 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 59 59 51 62 59 59 62 62 56 56 50 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 37 62 56 56 62 62 62 62 56 62 62 62 51 62 62 62 62 62 54 54 47 62 43 62 62 62 62 62 62 54 39 62 62 62 62 62 54 43 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 62 47 39 62 56 62 62 56 62 43 46 62 62 62 49 62 62 62 52 47 62 41 25 47 46 49 52 52 47 52 47 54 52 52 54 38 47 39 43 42 47 52 42 47 42 52 37 54 41 28 52 45 58 30 35 52 33 47 52 32 58 52 58 50 54 54 52 54 54 41 29 30 54 54 54 37 54 52 35 26 25 58 37 27 58 19 29 25 13 52 52 46 52 43 54 52 10 28 52 33 54 50 58 35 54 26 31 54 26 54 58 50 30 36 42 35 58 34 49 31 36 27 49 20 25 30 50 48 42 15 32 12 50 9 30 52 34 22 29 29 58 16 40 17 50 35 42 34 23 47 47 42 37 49 42 24 51 35 26 6 31 19 39 51 21 51 50 30 24 37 27 46 50 50 42 40 24 39 34 36 19 30 10 10 25 23 37 40 36 53 53 33 25 37 25 40 21 32 35 35 39 50 41 52 51 54 40 40 52 51 21 26 36 29 39 11 35 32 28 40 33 29 33 29 22 26 15 24 24 39 34 40 37 23 17 6 42 16 15 35 28 18 37 35 18 51 37 32 40 30 16 19 39 30 35 28 37 23 51 12 45 21 19 30 29 32 22 21 9 12 20 45 45 32 26 32 24 28 9 41 8 16 28 33 49 21 20 25 28 52 44 37 37 34 18 7 9 23 26 22 27 42 51 28 14 41 8 36 25 32 42 31 17 11 12 13 20 12 12 11 14 19 31 32 32 22 21 24 9 9 16 12 13 16 42 24 15 9 6 31 16 10 27 8 33 21 23 23 13 8 31 17 14 17 11 18 24 31 32 27 23 21 8 13 16 11 6 11 25 16 22 18 8 10 10 32 9 24 16 6 21 23 20 34 18 32 30 22 25 18 31 9 12 6 12 7 20 17 31 24 19 21 9 5 32 25 31 22 13 27 12 15 30 43 9 28 29 9 6 30 21 6 14 6 9 13 27 12 9 31 20 21 8 18 15 31 21 8 7 5 7 7 11 17 9 5	Open. Hide. 62 49 51 59 62 59 59 59 62 59 47 16 13 13 11 13 23 28 28 18 28 27 19 28 28 40 50 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 30 34 38 34 34 34 27 28 23 40 32 32 48 46 54 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 49 54 54 54 62 62 62 62 56 54 54 62 54 54 54 62 59 54 38 42 56 48 49 62 62 62 62 59 59 59 54 62 59 62 62 62 54 62 62 62 56 62 62 62 62 62 62 62 62 59 56 54 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 54 62 62 54 49 54 62 62 62 54 54 62 62 54 42 49 49 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 56 59 50 51 51 56 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 54 56 62 62 62 62 59 59 62 50 50 56 43 51 50 59 50 62 56 62 59 62 59 62 56 59 62 62 62 62 59 46 59 59 56 48 56 59 56 62 62 62 62 62 62 59 62 59 59 49 59 62 62 62 59 62 62 54 62 62 62 62 62 59 62 54 54 62 54 62 62 62 62 62 62 62 59 59 56 56 59 56 59 62 62 62 62 62 62 62 59 59 46 50 56 36 56 56 59 62 59 62 62 62 59 59 59 62 54 59 59 62 59 51 59 59 59 59 51 36 39 18 51 30 28 25 34 34 26 62 62 49 62 59 62 56 59 59 59 59 59 50 48 48 54 56 36 59 51 59 56 56 56 59 49 50 46 59 49 51 49 49 56 56 62 59 59 44 49 59 46 54 59 51 50 48 54 48 46 56 59 56 48 54 62 59 51 37 34 19 27 24 30 21 14 30 25 30 18 59 62 44 54 59 62 40 43 49 40 50 27 35 46 49 51 46 48 28 59 10 9 13 11 11 10 34 48 23 43 41 34 43 34 20 32 30 59 49 49 50 51 51 59 56 56 49 43 16 43 49 62 59 59 59 43 62 46 46 59 46 56 44 44 39 51 44 34 30 16 17 30 30 17 59 24 46 59 45 46 21 10 32 18 18 34 13 14 30 44 20 43 51 44 43 59 18 44 44 59 41 22 10 12 31 34 30 36 36 41 41 20 16 31 35 32 29 31 32 26 51 42 38 38 32 38 39 38 24 15 39 56 51 56 44 56 32 15 47 22 22 19 10 19 14 21 32 42 37 38 33 27 38 26 31 15 38 17 14 26 17 14 15 10 14 23 42 20 22 14 27 32 32 42 33 38 25 25 14 17 10 11 14 30 15 37 21 23 38 27 27 15 39 25 15 27 10 21 14 15 15 10 17 10 11 11 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr7_139863453_139864460
seq2: B6Ng01-228H07.b_47_1077

seq1  GAATTCAATTCCCAGCAACTACATGGTGACTCACAACCATCTCTAATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCCAGCAACTACATGGTGACTCACAACCATCTCTAATGGG  50

seq1  ATCAGATGGCCTCTTCTGGCCTGTCTGAAGACAGCGGCTGTGTCCTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATGGCCTCTTCTGGCCTGTCTGAAGACAGCGGCTGTGTCCTCATA  100

seq1  CACATAAAATAAATAAAAATAAATCTCAGAAAAGAAAACCAGCTACATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAAATAAATAAAAATAAATCTCAGAAAAGAAAACCAGCTACATAA  150

seq1  ACAAAGACGCCCTGTGAAGAATCCTGGTGATCATGGAGGTGCTTCCACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGACGCCCTGTGAAGAATCCTGGTGATCATGGAGGTGCTTCCACCC  200

seq1  CAGTGAGGTCAGCACGCTGGCTTTGACAGCGAGATGCTGCTGTTAGGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGGTCAGCACGCTGGCTTTGACAGCGAGATGCTGCTGTTAGGGCG  250

seq1  AATTGAGTAACTTAGATTTCTTACAACTCTGGGTGAATCTACACATACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGTAACTTAGATTTCTTACAACTCTGGGTGAATCTACACATACCT  300

seq1  TGGGAAGTTTACTGACAGTGTATCAAGAAAGAAAATAACCCTTGCATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGTTTACTGACAGTGTATCAAGAAAGAAAATAACCCTTGCATGTA  350

seq1  GCATACTAAGGAGATGGCTTCAGTGACCCAACGTAGATGCTAACAATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTAAGGAGATGGCTTCAGTGACCCAACGTAGATGCTAACAATGGG  400

seq1  CCTTGAACACATGTTACATGGGGAGGGAGTTTCAGAGTTGCAGAGGTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAACACATGTTACATGGGGAGGGAGTTTCAGAGTTGCAGAGGTAGG  450

seq1  GGCTTGGAGTCAGCCAGCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGAGTCAGCCAGCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTA  500

seq1  CATGGGTGTCAGCATCCTTCATGCAGGCATTTGTGGAGTATCTGCTAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTGTCAGCATCCTTCATGCAGGCATTTGTGGAGTATCTGCTAGGG  550

seq1  GTGAATGCTGGACACACGCCCTGCTTCCCCAGTGGGAGGTGGCAGGGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCTGGACACACGCCCTGCTTCCCCAGTGGGAGGTGGCAGGGTAT  600

seq1  GGAGTGATTCTGGGCTGGGAGGTATGCCCAGCTGTGGAATCGGAGAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGATTCTGGGCTGGGAGGTATGCCCAGCTGTGGAATCGGAGAGAGT  650

seq1  TTTCTTCCTGTTTCTAAA-TTCCAAA--GTTTGGTAGAGTTACATTATTG  697
      |||||||||||||||||| |||||||   |||||||||||||||||||||
seq2  TTTCTTCCTGTTTCTAAATTTCCAAAAGTTTTGGTAGAGTTACATTATTG  700

seq1  TTTATTAAGGAAAAGG-TTGGATA-TTGAAAAAGGAAGCCACC-TGGTCG  744
      |||||||||||||||| ||||||| |||||||||||||||||| ||||||
seq2  TTTATTAAGGAAAAGGTTTGGATATTTGAAAAAGGAAGCCACCTTGGTCG  750

seq1  ATCTCATGTGGCCTGGGAAGCCA-TTTGGCAGCTGCTCTGGGCTGGAAGG  793
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATCTCATGTGGCCTGGGAAGCCATTTTGGCAGCTGCTCTGGGCTGGAAGG  800

seq1  CCTGACCTGCCAAGCTGTGAGAGAACTCGTGACTGGTGCAACTG-TTGTG  842
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCTGACCTGCCAAGCTGTGAGAGAACTCGTGACTGGTGCAACTGTTTGTG  850

seq1  CTGCTGGGCTCTGCC-CTGACTTCCCCTGA-CACG-CCCTGTTCCAGCCT  889
      ||| ||||||||||| |||||||||||||| |||| ||||||||||||||
seq2  CTGTTGGGCTCTGCCTCTGACTTCCCCTGACCACGCCCCTGTTCCAGCCT  900

seq1  -GCACTCCCA-TCAGGCACCAGACCAGAGAGCA-CTTGAGTGAAGCCA-C  935
       ||||||||| |||||||||||||||||||||| |||||||||||||| |
seq2  GGCACTCCCATTCAGGCACCAGACCAGAGAGCACCTTGAGTGAAGCCACC  950

seq1  AGCT-GTCATAGAA-GACAGTGCT-GGTTCCACAGCAGTGCCGTC-ACCC  981
      | || |||||||||  |||||||| ||| |||||||| ||||||| ||| 
seq2  ATCTGGTCATAGAATAACAGTGCTGGGTCCCACAGCAATGCCGTCTACCT  1000

seq1  TGT-GGT-GTGG-CTTGTGCCCTG-CACCAC  1008
      ||| ||| |||| ||||||||||| ||||||
seq2  TGTAGGTGGTGGCCTTGTGCCCTGTCACCAC  1031

seq1: chr7_140009189_140009884
seq2: B6Ng01-228H07.g_67_767 (reverse)

seq1  ATTATT-ATTTGC-TATAAG-AAAGCACAGGGATGAAAAACAGGCATTAA  47
      |||||| || ||| |||||| |||||||||||||||||||||||||||||
seq2  ATTATTAATATGCTTATAAGAAAAGCACAGGGATGAAAAACAGGCATTAA  50

seq1  AGC-TTATTCACAGTAAATAAAAAG-AAAAAAGTGCAACAAAGGTGTTCG  95
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCTTTATTCACAGTAAATAAAAAGAAAAAAAGTGCAACAAAGGTGTTCG  100

seq1  GTTACTAGAAAATGAACTAAACCAACCTTACTATTCTAATACTAAACTTC  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAGAAAATGAACTAAACCAACCTTACTATTCTAATACTAAACTTC  150

seq1  AAAAAACAAAGGCTGGGGTGCTGGAGAGATTACTCAGCAGTTTAGAGCAC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAAGGCTGGGGTGCTGGAGAGATTACTCAGCAGTTTAGAGCAC  200

seq1  TTATTGTTATTGCAAAGGACCTGGGTTCCATACCCAGCATTAACCCATTA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTATTGCAAAGGACCTGGGTTCCATACCCAGCATTAACCCATTA  250

seq1  ACTCCAATTCCAGAGGATAAGATGCCCTCTTCTGGCCTCTACAGGCACCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAATTCCAGAGGATAAGATGCCCTCTTCTGGCCTCTACAGGCACCA  300

seq1  AGCACACATGCAGTACAACATACACACATATAAGCAAAAGAGTCACACAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACATGCAGTACAACATACACACATATAAGCAAAAGAGTCACACAC  350

seq1  ACAGAAGTAAACGATGTAAGAAATAATTAACAAGAGCACACCTCTGGTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTAAACGATGTAAGAAATAATTAACAAGAGCACACCTCTGGTGT  400

seq1  ATCTGTGATGATGGCAACTGAAGTAGTTGTTAGTGTCACAAGAAAGAAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGATGATGGCAACTGAAGTAGTTGTTAGTGTCACAAGAAAGAAAG  450

seq1  AAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500

seq1  AGAGAGAGGGAAAGAGAGAGAGAAAAGAAGAAAAGAAAAGCCTCAAAGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGGGAAAGAGAGAGAGAAAAGAAGAAAAGAAAAGCCTCAAAGCA  550

seq1  AACTTTTTTTTAATTCACCCTTACTGATATGTTAAAAACTACTGAGCCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTTTTAATTCACCCTTACTGATATGTTAAAAACTACTGAGCCTT  600

seq1  CCTATTTCCCCCTACAAAGGACATTGTCCTTTCATTAGAGAAGAACCAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCCCCCTACAAAGGACATTGTCCTTTCATTAGAGAAGAACCAGA  650

seq1  TATAGTTCATGATTTCACAGAGCTTAAATGTACAAACCAAATCCTGAATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTCATGATTTCACAGAGCTTAAATGTACAAACCAAATCCTGAATT  700

seq1  C  696
      |
seq2  C  701

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information