BAC Information

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BAC

Clone NameB6Ng01-228I12
Chromosome7 (Build37)
Map Location 106,503,638 - 106,638,175
singlet/doubletdoublet
Overlap geneGdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630
Upstream geneTsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1
Downstream geneArrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228I12.bB6Ng01-228I12.g
ACCGA041920GA041921
length106151
definitionB6Ng01-228I12.b B6Ng01-228I12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,638,070 - 106,638,175)(106,503,638 - 106,503,789)
sequence
gaattcaaccaagtaaaaaactcagtttctcacatgttgtaaacaaaatt
gatatttttaactttattgtggttgttgttggtggtagtgtgtgtgtgtg
tgtgtg
agttggtaggctgtgagctgaaggagcagtgtgcatccaagctgggggtg
gtggtggtgtggaggtttgctgggtatccacaggtctagtgtaaaaatcc
cttacagccccaacccctcttcgctctgctctcccatctgccagcatcca
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106638070_106638175
seq2: B6Ng01-228I12.b_43_148 (reverse)

seq1  CACACACACACACACACACTACCACCAACAACAACCACAATAAAGTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACTACCACCAACAACAACCACAATAAAGTTAAA  50

seq1  AATATCAATTTTGTTTACAACATGTGAGAAACTGAGTTTTTTACTTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAATTTTGTTTACAACATGTGAGAAACTGAGTTTTTTACTTGGTT  100

seq1  GAATTC  106
      ||||||
seq2  GAATTC  106

seq1: chr7_106503638_106503789
seq2: B6Ng01-228I12.g_73_223

seq1  AGTTGGTAGGCTGTGAGCTGAAGGAGCAGTGTGCATCCAAGCTGGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTAGGCTGTGAGCTGAAGGAGCAGTGTGCATCCAAGCTGGGGGTG  50

seq1  GTGGTGGTGTGGAGGTTTGCTGGGTTATCCACAGGTCTAGTGTAAAAATC  100
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTGGTGGTGTGGAGGTTTGCTGGG-TATCCACAGGTCTAGTGTAAAAATC  99

seq1  CCTTACAGCCCCACCCCCACTTCGCTCTGCTCTCCCATCTGCCAGCATCC  150
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  CCTTACAGCCCCAACCCCTCTTCGCTCTGCTCTCCCATCTGCCAGCATCC  149

seq1  AG  152
      ||
seq2  AG  151