BAC Information

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BAC

Clone NameB6Ng01-228K09
Chromosome7 (Build37)
Map Location 38,958,293 - 38,959,182
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp536, LOC100043453, EG627844, C80913, Ccne1
Downstream gene1600014C10Rik, Plekhf1, Pop4, LOC668519, LOC100043464, 1700010N08Rik, EG627975, EG625594, EG627983, EG434171, LOC100043467
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228K09.bB6Ng01-228K09.g
ACCGA042010GA042011
length223893
definitionB6Ng01-228K09.b B6Ng01-228K09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atgtgggttccctaacaattggaacagggctgtctctgactctgttgcct
gccattgcatcccttccctctacctagactgcctgatcaaaccttgatga
gatggatctacttagcactgcttggacctgatgttccagagcaggctgat
atcccagggaggctttgccttatctgaggaaaagaggaggttataatggt
gggagggatttgtgagggtgggg

gaattcaatggcctcttttagccatcgagggtaccaggccggcatgcaca
tggtgggcataaacgtacacactctttcacacgcgtgtacacatataaca
aataaatgaatatatactgctagaagagaaggaggaggaagaagaagaga
aagaagaggagaaggaagaagagaaggaggagagaggaggagaaaggcag
catagcagaagcggctgcagaagcaggcttggcatttcctatccggcatc
tctgggcctccggtgagcttcagccctctagcctaccacagggaaaagtt
gtttgaaggtctgtcccaataagcacctttataacaatcccttgagaact
catcccagatagatccagggtacctgatccttccagtcagacattgtgca
gagagagaatatcagagctaaggaggaagagccggagactgtcaggtaga
ggtgggctgctctggggctgctctgttcctgggccacgggaaggcctgga
tctcccggtagtttgagtgctgctcctcagttgatcccgctaaaaattct
gaaaggctacaggacattttggagttcggatattttcctctgaaaaaact
gactttttaagaaacttacaaagtgaatgcgttgtaactgttttgcaaat
ataacttcaagagagacccctgtcccgctgctctcctggtccacgcaccc
tcctccctgaccccgactgtccccgcagcaaacaagttctggggccctaa
gaatgtgagagggctgaagtcggtagggggccgggtgggagaatggactc
tcctcttccagcccaggagaaagaagctggttgtctggcacgcccgtgca
tccttggcggggtgattatctcaataataaaaggacaggaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_38958293_38959182
seq2: B6Ng01-228K09.g_69_961

seq1  GAATTCAATGGCCTCTTTTAGCCATCGAGGGTACCAGGCCGGCATGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGCCTCTTTTAGCCATCGAGGGTACCAGGCCGGCATGCACA  50

seq1  TGGTGGGCATAAACGTACACACTCTTTCACACGCGTGTACACATATAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGCATAAACGTACACACTCTTTCACACGCGTGTACACATATAACA  100

seq1  AATAAATGAATATATACTGCTAGAAGAGAAGGAGGAGGAAGAAGAAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGAATATATACTGCTAGAAGAGAAGGAGGAGGAAGAAGAAGAGA  150

seq1  AAGAAGAGGAGAAGGAAGAAGAGAAGGAGGAGAGAGGAGGAGAAAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGGAGAAGGAAGAAGAGAAGGAGGAGAGAGGAGGAGAAAGGCAG  200

seq1  CATAGCAGAAGCGGCTGCAGAAGCAGGCTTGGCATTTCCTATCCGGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAGAAGCGGCTGCAGAAGCAGGCTTGGCATTTCCTATCCGGCATC  250

seq1  TCTGGGCCTCCGGTGAGCTTCAGCCCTCTAGCCTACCACAGGGAAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCCTCCGGTGAGCTTCAGCCCTCTAGCCTACCACAGGGAAAAGTT  300

seq1  GTTTGAAGGTCTGTCCCAATAAGCACCTTTATAACAATCCCTTGAGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAGGTCTGTCCCAATAAGCACCTTTATAACAATCCCTTGAGAACT  350

seq1  CATCCCAGATAGATCCAGGGTACCTGATCCTTCCAGTCAGACATTGTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAGATAGATCCAGGGTACCTGATCCTTCCAGTCAGACATTGTGCA  400

seq1  GAGAGAGAATATCAGAGCTAAGGAGGAAGAGCCGGAGACTGTCAGGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAATATCAGAGCTAAGGAGGAAGAGCCGGAGACTGTCAGGTAGA  450

seq1  GGTGGGCTGCTCTGGGGCTGCTCTGTTCCTGGGCCACGGGAAGGCCTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCTGCTCTGGGGCTGCTCTGTTCCTGGGCCACGGGAAGGCCTGGA  500

seq1  TCTCCCGGTAGTTTGAGTGCTGCTCCTCAGTTGATCCCGCTAAAAATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCGGTAGTTTGAGTGCTGCTCCTCAGTTGATCCCGCTAAAAATTCT  550

seq1  GAAAGGCTACAGGACATTTTGGAGTTCGGATATTTTCCTCTGAAAAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCTACAGGACATTTTGGAGTTCGGATATTTTCCTCTGAAAAAACT  600

seq1  GACTTTTTAAGAAACTTACAAAGTGAATGCGTTGTAACTGTTTTGCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTAAGAAACTTACAAAGTGAATGCGTTGTAACTGTTTTGCAAAT  650

seq1  ATAACTTCAAGAGAGACCCCTGTCCCGCTGCTCTCCTGGTCCACGCACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTCAAGAGAGACCCCTGTCCCGCTGCTCTCCTGGTCCACGCACCC  700

seq1  TCCTCCCTGACCCCGACTGTCCCCGCAGCAAACAAGTTCTGGGGCCCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTGACCCCGACTGTCCCCGCAGCAAACAAGTTCTGGGGCCCTAA  750

seq1  GAATGTGAGAGGGCTGAAGTCGGTAGGGGGCCGGGTGGGAGAATGGACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGAGAGGGCTGAAGTCGGTAGGGGGCCGGGTGGGAGAATGGACTC  800

seq1  TCCTC-TCCAGCCCAGGAGAAAGGAAGCTGG-TGTCTGGCACGCCCGTGC  848
      ||||| |||||||||||||||| |||||||| ||||||||||||||||||
seq2  TCCTCTTCCAGCCCAGGAGAAA-GAAGCTGGTTGTCTGGCACGCCCGTGC  849

seq1  ATCC-TGGCGGGGTGATTATCTCAATAAT-AAAGGACAGGAAAA  890
      |||| |||||||||||||||||||||||| |||||||||||| |
seq2  ATCCTTGGCGGGGTGATTATCTCAATAATAAAAGGACAGGAATA  893


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