BAC Information

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BAC

Clone NameB6Ng01-228L18
Chromosome7 (Build37)
Map Location 93,544,801 - 93,655,257
singlet/doubletdoublet
Overlap geneOlfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298
Upstream geneLOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303
Downstream geneOlfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228L18.bB6Ng01-228L18.g
ACCGA042076GA042077
length1,1681,188
definitionB6Ng01-228L18.b B6Ng01-228L18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,544,801 - 93,545,951)(93,654,072 - 93,655,257)
sequence
gaattcttatcattagagtgaatagagttctccatggacatattcatgtt
cactatatattatacttctacatatatctaatttaggaaaataacttcac
aaccagaataaaaaagtcttatatcgttttttttaagtttatgaactttt
tatagtgaacacactgagtatatacctcttgtaacaatcaaagcagttgt
ataactgaaacaatgtcacttttgtgtctatctgcaagttcttatctcaa
acccttttggaggtttaagttataaaactcgattaaaacactatatgcat
gcttcatgctttatgcttattactctgattttgttacttatgtagaggag
aatctttatgagaagattttttttcagacctgaagagccaagtagtgtta
tgttggtaatattttatatggtcctatttgaacctgtaaatactgattgc
taaggaaaaatgttgaagcggttccctcagttctataagaaaatttgact
tttagggctatagattccataatgacaatttgaaaattaagcaaaattgt
aattcaagaaaacttttttataaaaaatttgaactaatttttaaatgttt
acatgtatttttaaatctttctctttaagaataaaattctttgtatttat
aaaaggccagattccaaagtggtttttattgtttttaggagaatcatatt
gcatatcttttaatttaccgttaaggtcaaaatatacagtaattatttta
aaaaattaactaaaccttgcaaatgaaattagacgaatgtcattcccttc
caaaaaccatagtattatattaaaagatctcaatcactgcccttgggatt
gacaggatagcacatttttcaactgaattaagcacaaaatggaattttga
acacagagaaaataaatttcaaaatcagggcagtctttcattaaactgat
actcaaatattaaaaagtgaatcatacacagttaacatatagaatggagt
cattcaccctacataacaaaacgcaaatgtaagaaaagaattatagcatt
gttttaattaacctttttcaaatcaccaagtcctactgacacagtttatt
ttggatgagcctgcattaaccctgcagaaaaaactggaggaattgaaatg
ccacaatctttccttact
gaattctttgcacatccagcaccatgtctacctgcatgctgccatgcttc
ctgccacgatgaaaatggattgaacctctaacactgtaaaccatccctag
tgaaatgttttccttataagagttgccttggtcatcaagtctcttcacag
caaaggaaaccctaaataagatatgtacatttgcaaaaatcaataatatc
atctatattttgaataatacgtttattttcatgtaaattttgaagcattg
gtgtgctgaatttcaatttatacatgtgccaatatccccaattatattct
tgaagcttaaattgtgggctacataaaatagacttctaaaccctgttatt
tatatcccccttaagaaaaataaaactactctactcttattactatcatt
gaatcactgatcatgtacatgaaaaactaattctgattttactaacacat
tcttttctattatatctctattattacaagcatcactagaatctgaactt
ttcatacctacaatttagttaacataactttgcccccaggagtgagtttc
tttcctgtaaaatcttttccaaagtgcctcatacactacaacaagaaaga
acatttcataatgtcactcagaacatatttctatcctcatttaaaattca
atgtctgtattttgtaataatgtgtataaaaattctgcttatgacctaga
aaagctgtgtgataagttatcaaatattttattagaaccaccactactaa
aacaagaactgctactaccactactattatttgaaacaaaattcttaaat
tgttagccaaggctatcttagaactatccaaatatcccagggtggcaatt
atattacctcagccatccaggtattataattataggtgcaaccacaacac
taaaggttttttttttttttccttcacctaagtaattgttcctcttgaaa
tcctgttgtcatgcactgggtcatgtcttccaccacactagtcattcaca
tgctgcccgtgtttaatggccaaaaacccctcctccattttccatgcatg
cattagagctggtgattccactcttggagaagattgccttagaatgttaa
gtttcctaaatcaattcctctatcaagtaaatggcttcaagcctcaaacc
tctgtgtgccacaagtactggctcagttactttgtaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93544801_93545951
seq2: B6Ng01-228L18.b_50_1217

seq1  GAATTCTTATCATTAGAGTGAATAGAGTTCTCCATGGACATATTCATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCATTAGAGTGAATAGAGTTCTCCATGGACATATTCATGTT  50

seq1  CACTATATATTATACTTCTACATATATCTAATTTAGGAAAATAACTTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATATATTATACTTCTACATATATCTAATTTAGGAAAATAACTTCAC  100

seq1  AACCAGAATAAAAAAGTCTTATATCGTTTTTTTTAAGTTTATGAACTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAATAAAAAAGTCTTATATCGTTTTTTTTAAGTTTATGAACTTTT  150

seq1  TATAGTGAACACACTGAGTATATACCTCTTGTAACAATCAAAGCAGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGAACACACTGAGTATATACCTCTTGTAACAATCAAAGCAGTTGT  200

seq1  ATAACTGAAACAATGTCACTTTTGTGTCTATCTGCAAGTTCTTATCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGAAACAATGTCACTTTTGTGTCTATCTGCAAGTTCTTATCTCAA  250

seq1  ACCCTTTTGGAGGTTTAAGTTATAAAACTCGATTAAAACACTATATGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTTGGAGGTTTAAGTTATAAAACTCGATTAAAACACTATATGCAT  300

seq1  GCTTCATGCTTTATGCTTATTACTCTGATTTTGTTACTTATGTAGAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATGCTTTATGCTTATTACTCTGATTTTGTTACTTATGTAGAGGAG  350

seq1  AATCTTTATGAGAAGATTTTTTTTCAGACCTGAAGAGCCAAGTAGTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATGAGAAGATTTTTTTTCAGACCTGAAGAGCCAAGTAGTGTTA  400

seq1  TGTTGGTAATATTTTATATGGTCCTATTTGAACCTGTAAATACTGATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTAATATTTTATATGGTCCTATTTGAACCTGTAAATACTGATTGC  450

seq1  TAAGGAAAAATGTTGAAGCGGTTCCCTCAGTTCTATAAGAAAATTTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAAAATGTTGAAGCGGTTCCCTCAGTTCTATAAGAAAATTTGACT  500

seq1  TTTAGGGCTATAGATTCCATAATGACAATTTGAAAATTAAGCAAAATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGCTATAGATTCCATAATGACAATTTGAAAATTAAGCAAAATTGT  550

seq1  AATTCAAGAAAACTTTTTTATAAAAAATTTGAACTAATTTTTAAATGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAGAAAACTTTTTTATAAAAAATTTGAACTAATTTTTAAATGTTT  600

seq1  ACATGTATTTTTAAATCTTTCTCTTTAAGAATAAAATTCTTTGTATTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATTTTTAAATCTTTCTCTTTAAGAATAAAATTCTTTGTATTTAT  650

seq1  AAAAGGCCAGATTCCAAAGTGGTTTTTATTGTTTTTAGGAGAATCATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCAGATTCCAAAGTGGTTTTTATTGTTTTTAGGAGAATCATATT  700

seq1  GCATATC-TTTAATTTACCGTTAAGGTCAAAATATACAGTAATTATTTTA  749
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCTTTTAATTTACCGTTAAGGTCAAAATATACAGTAATTATTTTA  750

seq1  AAAAATTAACTAAACCTTGCAAATGAAATTAGACGAATGTCATTCCCTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAACTAAACCTTGCAAATGAAATTAGACGAATGTCATTCCCTTC  800

seq1  CAAAAACCATAGTATTATATTAAAAGATCTCAATCACTGCCCTTGGGATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACCATAGTATTATATTAAAAGATCTCAATCACTGCCCTTGGGATT  850

seq1  GACAGGATAGCACATTTTTCAACTGAATTAAGCACAAAATGGAA-TTTGA  898
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GACAGGATAGCACATTTTTCAACTGAATTAAGCACAAAATGGAATTTTGA  900

seq1  ACACAGAGAAAATAAA-TTCAAAATCAGGGCAGTCTTTCATTAAACTGAT  947
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACACAGAGAAAATAAATTTCAAAATCAGGGCAGTCTTTCATTAAACTGAT  950

seq1  ACTCAAATA-TAAAAAGTGAATCATACACAGTTAACATATAGAATGGAGT  996
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAATATTAAAAAGTGAATCATACACAGTTAACATATAGAATGGAGT  1000

seq1  CATTCAACCTACAT-ACAAAACGCATATGTAAG-AAAGAA-TATAGCATT  1043
      |||||| ||||||| |||||||||| ||||||| |||||| |||||||||
seq2  CATTCACCCTACATAACAAAACGCAAATGTAAGAAAAGAATTATAGCATT  1050

seq1  GTTTTAA-TAACC-TTTTCAAATCACCAAAGTCCTACTG--ACAGTT--A  1087
      ||||||| ||||| ||||||||||||| |||||||||||  ||||||   
seq2  GTTTTAATTAACCTTTTTCAAATCACC-AAGTCCTACTGACACAGTTTAT  1099

seq1  TTTGGATGAGCCCTGCATTA--CCTGCAG--AAAACT-GAGGAA-TGAAA  1131
      |||||||||| |||||||||  |||||||  |||||| |||||| |||||
seq2  TTTGGATGAG-CCTGCATTAACCCTGCAGAAAAAACTGGAGGAATTGAAA  1148

seq1  TG-CACAATCTTTCCCTTACT  1151
      || |||||||||| |||||||
seq2  TGCCACAATCTTT-CCTTACT  1168

seq1: chr7_93654072_93655257
seq2: B6Ng01-228L18.g_70_1257 (reverse)

seq1  TGTACAAGGTTAACTGA-CCAGTACTTGGTGGGCACACAGAGGTTTTTGG  49
      ||||||| | ||||||| ||||||||||   |||||||||||||||   |
seq2  TGTACAAAG-TAACTGAGCCAGTACTTG--TGGCACACAGAGGTTT---G  44

seq1  AGCTTTGA--GCATTCCTGTGATAGAAGGGATGATTTAGGAAAC-TAACA  96
      ||  ||||   ||||    ||||||| |   ||||||||||||| |||||
seq2  AGGCTTGAAGCCATTTACTTGATAGAGGAATTGATTTAGGAAACTTAACA  94

seq1  -TCTAAGGCAA--TTCTCCCAGAAGTGAATCA-CAGCTCTTATGCATGCA  142
       ||||||||||  |||||| |||   |||||| ||||||| |||||||||
seq2  TTCTAAGGCAATCTTCTCCAAGAGTGGAATCACCAGCTCTAATGCATGCA  144

seq1  TGG-AAATGGAG--AGGGTTTTTTGCCA-TAAACACGGGCAGCATGTGAA  188
      ||| ||||||||   |||||||| |||| ||||||||||||||||||| |
seq2  TGGAAAATGGAGGAGGGGTTTTTGGCCATTAAACACGGGCAGCATGTG-A  193

seq1  ATGACTAGTGTGGTGAAAGACATGA-CCAGTGCATGACAACAGGATTTTC  237
      ||||||||||||||| ||||||||| ||||||||||||||||||| ||||
seq2  ATGACTAGTGTGGTGGAAGACATGACCCAGTGCATGACAACAGGA-TTTC  242

seq1  AAGA-GAACATTTACTTAGGTGAAAGAAAAAAAAAAAAAAAAAACCTTAG  286
      |||| ||||| ||||||||||||| |   |||||||||||||| | ||||
seq2  AAGAGGAACAATTACTTAGGTGAAGG---AAAAAAAAAAAAAACCTTTAG  289

seq1  TGTTGTGGTTTGCACCTATAATTATAATACCTGGATGGCTGAGGTAATAT  336
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGG-TTGCACCTATAATTATAATACCTGGATGGCTGAGGTAATAT  338

seq1  AATTGCCACCCTGGGATATTTGGATAGTTCTAAGATAGCCTTGGCTAACA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCACCCTGGGATATTTGGATAGTTCTAAGATAGCCTTGGCTAACA  388

seq1  ATTTAAGAATTTTGTTTCAAATAATAGTAGTGGTAGTAGCAGTTCTTGTT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAATTTTGTTTCAAATAATAGTAGTGGTAGTAGCAGTTCTTGTT  438

seq1  TTAGTAGTGGTGGTTCTAATAAAATATTTGATAACTTATCACACAGCTTT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGTGGTGGTTCTAATAAAATATTTGATAACTTATCACACAGCTTT  488

seq1  TCTAGGTCATAAGCAGAATTTTTATACACATTATTACAAAATACAGACAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTCATAAGCAGAATTTTTATACACATTATTACAAAATACAGACAT  538

seq1  TGAATTTTAAATGAGGATAGAAATATGTTCTGAGTGACATTATGAAATGT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTAAATGAGGATAGAAATATGTTCTGAGTGACATTATGAAATGT  588

seq1  TCTTTCTTGTTGTAGTGTATGAGGCACTTTGGAAAAGATTTTACAGGAAA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTGTTGTAGTGTATGAGGCACTTTGGAAAAGATTTTACAGGAAA  638

seq1  GAAACTCACTCCTGGGGGCAAAGTTATGTTAACTAAATTGTAGGTATGAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCACTCCTGGGGGCAAAGTTATGTTAACTAAATTGTAGGTATGAA  688

seq1  AAGTTCAGATTCTAGTGATGCTTGTAATAATAGAGATATAATAGAAAAGA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAGATTCTAGTGATGCTTGTAATAATAGAGATATAATAGAAAAGA  738

seq1  ATGTGTTAGTAAAATCAGAATTAGTTTTTCATGTACATGATCAGTGATTC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTAGTAAAATCAGAATTAGTTTTTCATGTACATGATCAGTGATTC  788

seq1  AATGATAGTAATAAGAGTAGAGTAGTTTTATTTTTCTTAAGGGGGATATA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAGTAATAAGAGTAGAGTAGTTTTATTTTTCTTAAGGGGGATATA  838

seq1  AATAACAGGGTTTAGAAGTCTATTTTATGTAGCCCACAATTTAAGCTTCA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGGGTTTAGAAGTCTATTTTATGTAGCCCACAATTTAAGCTTCA  888

seq1  AGAATATAATTGGGGATATTGGCACATGTATAAATTGAAATTCAGCACAC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAATTGGGGATATTGGCACATGTATAAATTGAAATTCAGCACAC  938

seq1  CAATGCTTCAAAATTTACATGAAAATAAACGTATTATTCAAAATATAGAT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTTCAAAATTTACATGAAAATAAACGTATTATTCAAAATATAGAT  988

seq1  GATATTATTGATTTTTGCAAATGTACATATCTTATTTAGGGTTTCCTTTG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTATTGATTTTTGCAAATGTACATATCTTATTTAGGGTTTCCTTTG  1038

seq1  CTGTGAAGAGACTTGATGACCAAGGCAACTCTTATAAGGAAAACATTTCA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAGAGACTTGATGACCAAGGCAACTCTTATAAGGAAAACATTTCA  1088

seq1  CTAGGGATGGTTTACAGTGTTAGAGGTTCAATCCATTTTCATCGTGGCAG  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGATGGTTTACAGTGTTAGAGGTTCAATCCATTTTCATCGTGGCAG  1138

seq1  GAAGCATGGCAGCATGCAGGTAGACATGGTGCTGGATGTGCAAAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGGCAGCATGCAGGTAGACATGGTGCTGGATGTGCAAAGAATTC  1188