BAC Information

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BAC

Clone NameB6Ng01-229E08
Chromosome7 (Build37)
Map Location 84,353,498 - 84,354,631
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC434200, EG244071
Downstream geneA330068G13Rik, Ntrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229E08.bB6Ng01-229E08.g
ACCGA042465GA042466
length1,1241,212
definitionB6Ng01-229E08.b B6Ng01-229E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccaagctcatcttatgttattttgattcaaaatgtgcagttat
attccatactttgtatacatgtgcatatgtgtttgcctagtgtatttatg
tacatatacatacatgcacatatatatgaatcccaaacaatagtttattt
agaaaatattttaatagctttccaagtttaaaaattgaaagagaaaaaat
aaagtaaaaagaatttgtcaaaagagagactgtatagcacatgattttcc
taattaaaaaaaaaatacttactatacatttgttggtaggaaacttccct
aactttataaactttatttccccaaactcatcaaactatgcagtcaaacc
tttggcactactttaacacacacacacacacacacacacacacacacaca
cacacacacacacctacctccattctgtatttaattgattcttacccgat
aaagcaaaaagaatagcaaacaaataacttccaaatggaacctccaaaga
ctgtcaatccaagaataatattaattacttgtttaaaagaagtaagagat
tctaaaatcaattcttaaaattaatcctaaaaaattcttatgaggcttct
ggtcataaatccaaaacataaaataaagtacattcttttttcttttttaa
aaaaaatcagtccattattatattctcatagtacacagtaacaaagtttg
cttttaatgacctatgtacaaatgtcaaaacactaaaaacttaaatggaa
aatctaaccatgaagatacgtatagaaatagtaaatcttgatgccatgaa
ataaggaagacaaaatatgtggcttttaatacgataatatcatacagaag
aatagtgactttagaaaacagaaattaaatcaaaactcacagggacaatt
gtaaagtaaataatactcatttgtaacaagggaaactgtagtttgtgtgg
atcattctacagccccccagaaacagtaaaattcagagtcaagcatcgca
tacataaaaaaaacctgggttttatttactgtgatacatatgggccaaca
ctttggaaacaagtcagcattcttgtataactaacagatgtattgtgtgt
ggatctacaataccactctctttc
gaattcttctggaagtattaggaaatgtggccttgctaaatgaagtgttt
cattgggggtatgctttgaggcttcaaaagactcactgtttctggtgcat
tctttctctctctctctctctctctctctctctctctctctctctctctc
tctccctccctccctccctccgtccctccttccctccgtctctgctgcat
ggttgtggatcaagatgtgtgctctcagcctttctgccatgacatcatta
aggattctaagcttctgaaacagtatgcaacattaaacacaggctgctgt
agttatggtgttttataccagcaatacaaaggataaccctattaaaaaat
ggggtatagagctaaacaaagaattctcaactgaggaataccaaatggct
gagaagcaccatgaaaactgttcaacatccttagtcatcagggaaatgca
aatcaaaataaacctgagattccacttcaaaccagtcagaatagctaaga
tcagaaactcaagtgacagcagatgctggcgaggatgttgagaaagacaa
acaattctccattgctggtgtgattgcaagctggtacaaccactctggaa
atcagtttggtgtttcctcagaaaattggacatagtactactggaggatc
cagcaatacctctcctggtcatatacccagaagatgctccaatgtgtaat
taagacatatgctccactatgttcatagcagccttatttataatagccag
aatttggaaagaacccaaatgttcctcaacagaggaatagatatagaata
tgtgttacatttacataatggagtactacacagctattaaaaacaatgaa
tttatgaaattcttagacaaatggattggatctggaggatatcatcctga
gtgaagtaacccaatcacaaaagaatgcaacatgattagtcacctccact
tgattaaggtgaatattaatcccagagcaacaaaattacccagggattcc
aatttgcaaaacacatggaaacttcaggaggaaaatggactcaagagtgg
tgattcctttggatcctttctttaggaatggggaacgaaaatacccattg
gaacggagttacggagattaagtgtgaagtcatgaccgagagaaaatgaa
catctagacttgccccacttggatccacttcccttaaacataccccccgt
aaatgaactcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84353498_84354631
seq2: B6Ng01-229E08.b_48_1171 (reverse)

seq1  GAAAGAGAGTGGGTATTGTAAGATCCCACAACAACAATAACATCTTGTTA  50
      |||||||||| |||||||| |||| |||||   ||||| ||||| |||||
seq2  GAAAGAGAGT-GGTATTGT-AGAT-CCACA--CACAAT-ACATC-TGTTA  43

seq1  GTTATACAAGGAAATGCTGACTTTGTTTCCAAAGTGGTTGGCCCATATGT  100
      ||||||||||  ||||||||| ||||||||||||| ||||||||||||||
seq2  GTTATACAAG--AATGCTGAC-TTGTTTCCAAAGT-GTTGGCCCATATGT  89

seq1  ATTCAACAAGTAAATAAAA-CCAGGTTTTTTTTATGTATGCGATGCTTGA  149
      | |||   ||||||||||| ||||||||||||||||||||||||||||| 
seq2  A-TCA--CAGTAAATAAAACCCAGGTTTTTTTTATGTATGCGATGCTTG-  135

seq1  ACTCTGAATTTTACTG-TTCTGGGGGGCTGTAGAATGATCCACACAAACT  198
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTCTGAATTTTACTGTTTCTGGGGGGCTGTAGAATGATCCACACAAACT  185

seq1  ACAGTTT-CCTTGTTACAAATGAGTATTATTTACTTTACAATTGTCCCTG  247
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCCCTTGTTACAAATGAGTATTATTTACTTTACAATTGTCCCTG  235

seq1  TGAGTTTTGATTTAATTTCTGTTTTCTAAAGTCACTATTCTTCTGTATGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTGATTTAATTTCTGTTTTCTAAAGTCACTATTCTTCTGTATGA  285

seq1  TATTATCGTATTAAAAGCCACATATTTTGTCTTCCTTATTTCATGGCATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCGTATTAAAAGCCACATATTTTGTCTTCCTTATTTCATGGCATC  335

seq1  AAGATTTACTATTTCTATACGTATCTTCATGGTTAGATTTTCCATTTAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTACTATTTCTATACGTATCTTCATGGTTAGATTTTCCATTTAAG  385

seq1  TTTTTAGTGTTTTGACATTTGTACATAGGTCATTAAAAGCAAACTTTGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTGTTTTGACATTTGTACATAGGTCATTAAAAGCAAACTTTGTT  435

seq1  ACTGTGTACTATGAGAATATAATAATGGACTGATTTTTTTTAAAAAAGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTACTATGAGAATATAATAATGGACTGATTTTTTTTAAAAAAGAA  485

seq1  AAAAGAATGTACTTTATTTTATGTTTTGGATTTATGACCAGAAGCCTCAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATGTACTTTATTTTATGTTTTGGATTTATGACCAGAAGCCTCAT  535

seq1  AAGAATTTTTTAGGATTAATTTTAAGAATTGATTTTAGAATCTCTTACTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTTTTAGGATTAATTTTAAGAATTGATTTTAGAATCTCTTACTT  585

seq1  CTTTTAAACAAGTAATTAATATTATTCTTGGATTGACAGTCTTTGGAGGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAACAAGTAATTAATATTATTCTTGGATTGACAGTCTTTGGAGGT  635

seq1  TCCATTTGGAAGTTATTTGTTTGCTATTCTTTTTGCTTTATCGGGTAAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTGGAAGTTATTTGTTTGCTATTCTTTTTGCTTTATCGGGTAAGA  685

seq1  ATCAATTAAATACAGAATGGAGGTAG--GTGTGTGTGTGTGTGTGTGTGT  745
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  ATCAATTAAATACAGAATGGAGGTAGGTGTGTGTGTGTGTGTGTGTGTGT  735

seq1  GTGTGTGTGTGTGTGTGTGTGTGTTAAAGTAGTGCCAAAGGTTTGACTGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTTAAAGTAGTGCCAAAGGTTTGACTGC  785

seq1  ATAGTTTGATGAGTTTGGGGAAATAAAGTTTATAAAGTTAGGGAAGTTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTGATGAGTTTGGGGAAATAAAGTTTATAAAGTTAGGGAAGTTTC  835

seq1  CTACCAACAAATGTATAGTAAGTATTTTTTTTTTAATTAGGAAAATCATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAACAAATGTATAGTAAGTATTTTTTTTTTAATTAGGAAAATCATG  885

seq1  TGCTATACAGTCTCTCTTTTGACAAATTCTTTTTACTTTATTTTTTCTCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATACAGTCTCTCTTTTGACAAATTCTTTTTACTTTATTTTTTCTCT  935

seq1  TTCAATTTTTAAACTTGGAAAGCTATTAAAATATTTTCTAAATAAACTAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTTTAAACTTGGAAAGCTATTAAAATATTTTCTAAATAAACTAT  985

seq1  TGTTTGGGATTCATATATATGTGCATGTATGTATATGTACATAAATACAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGATTCATATATATGTGCATGTATGTATATGTACATAAATACAC  1035

seq1  TAGGCAAACACATATGCACATGTATACAAAGTATGGAATATAACTGCACA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAACACATATGCACATGTATACAAAGTATGGAATATAACTGCACA  1085

seq1  TTTTGAATCAAAATAACATAAGATGAGCTTGGTGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATCAAAATAACATAAGATGAGCTTGGTGAATTC  1124