BAC Information

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BAC

Clone NameB6Ng01-229L09
Chromosome7 (Build37)
Map Location 94,397,183 - 94,480,652
singlet/doubletdoublet
Overlap geneNox4
Upstream geneOlfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneTyr, Grm5, Ctsc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229L09.bB6Ng01-229L09.g
ACCGA042768GA042769
length1,1281,100
definitionB6Ng01-229L09.b B6Ng01-229L09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,479,659 - 94,480,652)(94,397,183 - 94,398,084)
sequence
gaattctcctgtttcctgcttttggtgggaaaccttgctccttgaccatc
aggatttacaaatagactaaggaggtgactgttctgtccagagacatcgg
cgggacttgaggtttcatgatagggtctctggatggaagggacggggagc
tgctctccctgcttctgctaatgtagtaaccagagtcacacatggaaaag
gacagtgccttaaatctctgggaaacacatcctgatatgaactgggattt
ccgatctggaaacacgggtgggccatcagagaaatatagacagctgtaaa
gtaacagaaggttagtcgactgataatagtgccttttgccattcagagct
catgggaatgtagagggaaataaatgaaacaagactgaatcaaaagtcac
cataaacatggatgtcctggaaacaaatcgaaaattgtaaaaagtgtttc
aataaaaaatgacagcaggatggaaaggtgctgatttgtaaagaccatga
atgaatgggaaatgctcagtgcatttaccagtaagaaggcatggttcatc
ttggaagtatcttcatggcatgcagctgtggccaaatccaagggtaagca
acagagaaagagagaaaagtctgatgaattgcagcagtagccagaaggga
cgagtcaggaaaggagtgtcttcattttctccttgaaaccaggaggtgag
agaaatatcaaaaactattgatggaataaatcaaattaatattaaccagt
ctatttgttctgagtatgctgctttatttagctcacatttatcacagaag
ctatcattagtctctgaggaaacattgcttttctcctggaagacagccaa
agtacaggagttaggtgatgtttaattctcaaaaacctcaaacattttgt
tgggttctatggatactaatcactgtctgtggttttcaacactgtgcctt
gaaatacataatgacagattgtgcctggcaagctaccttctccttccaag
cttctagcgcaaagatctgagaaaaacaagagtaaggcaaggttttaagt
tgctaactagaaggattaagaagcagaaattccaaagtagttgacaagga
atactagtttacatttcattgacataaa
gaattctctgctttagcaagactgacaaaatcggaggacagatgttttct
tctttcttttaattaagtgctacgattgttgtttctgatttgatcagaag
ttgcttttcatttttttgatatgtttgaatttgaattgtggctggcttac
cttgattgaggttcttctgttatcctcatccactgacttcgatattgggg
tccaaactttgtgtcagaaaagaaaaaagagaccccctccctgattgaaa
agtctgaaataaaaatggacgtcctttctcatcggaataaggtttcttca
tttatgggcaactgttctttacatgagggacacctccgtccccaccaata
cagtgactcctattttggaaatgccgttttgtttgatgctgagaaaccag
gtaaacccacaagcaaacaaaccaatcaaataattgtaggttaataaaca
cattaagaagaatttctctgatgagttaccaaggacgcctagcttttcat
tctctttcttgaaaactcactactcaaagtgaattaataagtgagaagtt
tttaaatatgaggtttattttacttaatgcataacacactcggtgaacaa
cttgtaagaaatcacgtgagaattaccctggcagagtttgttctggatca
gggtgcttatgttactatccaaatctaagaattataaaagccataactca
actttggagttttactcttaaaataatagaaacgtttcctttctaaaggg
agctaagctaattttgcttgactccaacagggtgggtttcatgtacttgg
gatgctgtgtaatttgttgttgacaaatcagctaagattaagctcgtgtg
tacttgcccgtacatacaggaacagatatagtcaaacccattttaaagac
acttcaaaatatgctccatgttctactgtattctacgttagtgcttttgc
tcaaggtgatgttatagaacagagatgtctaagaactgtgcattcatgac
agggattggccaccgttgatgaaaagctcagatgggtgatggagggaaaa
agaagtgcagcaggcagactgatggaaacctcatgaactagtgaacagca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94479659_94480652
seq2: B6Ng01-229L09.b_168_1167 (reverse)

seq1  TTTATGTC-ATTAAATGT-AACTAGTAATTCTTTGTCAACTACTTTG--A  46
      |||||||| || |||||| ||||||| |||| |||||||||||||||  |
seq2  TTTATGTCAATGAAATGTAAACTAGT-ATTCCTTGTCAACTACTTTGGAA  49

seq1  TTTCTGC-TCTTAATCCCTTCTAGTTAGC-ACTTAAAA-CTTGCCTTACT  93
      ||||||| ||||||| ||||||||||||| |||||||| |||||||||||
seq2  TTTCTGCTTCTTAAT-CCTTCTAGTTAGCAACTTAAAACCTTGCCTTACT  98

seq1  CTTGTTTTTCTCAGATCTTTTGCGCTAGAAGCTTGG-AGGAGAAGGTAGC  142
      ||||||||||||||||| |||||||||||||||||| |||||||||||||
seq2  CTTGTTTTTCTCAGATC-TTTGCGCTAGAAGCTTGGAAGGAGAAGGTAGC  147

seq1  TTGCCAGGCACAATCTGTCATTATGTA-TTCAAGGCACAGTGTTGAAAAC  191
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTGCCAGGCACAATCTGTCATTATGTATTTCAAGGCACAGTGTTGAAAAC  197

seq1  CACAGACAGTGATTAGTATCCATAGAACCCAACAAAATGTTTGAGGTTTT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACAGTGATTAGTATCCATAGAACCCAACAAAATGTTTGAGGTTTT  247

seq1  TGAGAATTAAACATCACCTAACTCCTGTACTTTGGCTGTCTTCCAGGAGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATTAAACATCACCTAACTCCTGTACTTTGGCTGTCTTCCAGGAGA  297

seq1  AAAGCAATGTTTCCTCAGAGACTAATGATAGCTTCTGTGATAAATGTGAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATGTTTCCTCAGAGACTAATGATAGCTTCTGTGATAAATGTGAG  347

seq1  CTAAATAAAGCAGCATACTCAGAACAAATAGACTGGTTAATATTAATTTG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAAGCAGCATACTCAGAACAAATAGACTGGTTAATATTAATTTG  397

seq1  ATTTATTCCATCAATAGTTTTTGATATTTCTCTCACCTCCTGGTTTCAAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCCATCAATAGTTTTTGATATTTCTCTCACCTCCTGGTTTCAAG  447

seq1  GAGAAAATGAAGACACTCCTTTCCTGACTCGTCCCTTCTGGCTACTGCTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATGAAGACACTCCTTTCCTGACTCGTCCCTTCTGGCTACTGCTG  497

seq1  CAATTCATCAGACTTTTCTCTCTTTCTCTGTTGCTTACCCTTGGATTTGG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCATCAGACTTTTCTCTCTTTCTCTGTTGCTTACCCTTGGATTTGG  547

seq1  CCACAGCTGCATGCCATGAAGATACTTCCAAGATGAACCATGCCTTCTTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCTGCATGCCATGAAGATACTTCCAAGATGAACCATGCCTTCTTA  597

seq1  CTGGTAAATGCACTGAGCATTTCCCATTCATTCATGGTCTTTACAAATCA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAATGCACTGAGCATTTCCCATTCATTCATGGTCTTTACAAATCA  647

seq1  GCACCTTTCCATCCTGCTGTCATTTTTTATTGAAACACTTTTTACAATTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTTCCATCCTGCTGTCATTTTTTATTGAAACACTTTTTACAATTT  697

seq1  TCGATTTGTTTCCAGGACATCCATGTTTATGGTGACTTTTGATTCAGTCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATTTGTTTCCAGGACATCCATGTTTATGGTGACTTTTGATTCAGTCT  747

seq1  TGTTTCATTTATTTCCCTCTACATTCCCATGAGCTCTGAATGGCAAAAGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATTTATTTCCCTCTACATTCCCATGAGCTCTGAATGGCAAAAGG  797

seq1  CACTATTATCAGTCGACTAACCTTCTGTTACTTTACAGCTGTCTATATTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATTATCAGTCGACTAACCTTCTGTTACTTTACAGCTGTCTATATTT  847

seq1  CTCTGATGGCCCACCCGTGTTTCCAGATCGGAAATCCCAGTTCATATCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGGCCCACCCGTGTTTCCAGATCGGAAATCCCAGTTCATATCAG  897

seq1  GATGTGTTTCCCAGAGATTTAAGGCACTGTCCTTTTCCATGTGTGACTCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTTTCCCAGAGATTTAAGGCACTGTCCTTTTCCATGTGTGACTCT  947

seq1  GGTTACTACATTAGCAGAAGCAGGGAGAGCAGCTAGGTGTCTGTCCCATC  991
      ||||||||||||||||||||||||||||||||||    |||  | |||||
seq2  GGTTACTACATTAGCAGAAGCAGGGAGAGCAGCTCCCCGTCCCTTCCATC  997

seq1  CAG  994
      |||
seq2  CAG  1000

seq1: chr7_94397183_94398084
seq2: B6Ng01-229L09.g_257_1164

seq1  TATTGGGGTCAGAAACATTGTTTCAGAAAAGAAAAAAGAGACCCCCTCCC  50
      ||||||||||  |||| |||| ||||||||||||||||||||||||||||
seq2  TATTGGGGTC-CAAACTTTGTGTCAGAAAAGAAAAAAGAGACCCCCTCCC  49

seq1  TTATTGAAGATTCTGAAATTAATATGCTTGTCCTTTCTCATCTATCTAAA  100
      | |||||| | |||||||| || |||   |||||||||||||    ||| 
seq2  TGATTGAAAAGTCTGAAATAAAAATGGACGTCCTTTCTCATCGGAATAAG  99

seq1  TTTGGTCTATTTATCTAGAACTGTTCTTTACATTGCTTTCTAAATAGTCC  150
       ||  |  ||||||    |||||||||||||||      |      ||||
seq2  GTTTCTTCATTTATGGGCAACTGTTCTTTACATGAGGGACACCTCCGTCC  149

seq1  CAGAGAATAAAGTATTTACTATTTTTCAAGTGCCTTACACTCTGATGCAA  200
      |    |||| |||   | |||||||  || |||| |    | ||||||  
seq2  CCACCAATACAGTGACTCCTATTTTGGAAATGCCGTTTTGTTTGATGC--  197

seq1  AACAGCAACCA---AAACCCACAAGCAAACAAACCAATCAAATAATTGTA  247
         || |||||   ||||||||||||||||||||||||||||||||||||
seq2  -TGAGAAACCAGGTAAACCCACAAGCAAACAAACCAATCAAATAATTGTA  246

seq1  GGTTAATAAACACATTAAGAAGAATTTCTCTGATGAGTTACCAAGGACGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAATAAACACATTAAGAAGAATTTCTCTGATGAGTTACCAAGGACGC  296

seq1  CTAGCTTTTCATTCTCTTTCTTGAAAACTCACTACTCAAAGTGAATTAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTTTCATTCTCTTTCTTGAAAACTCACTACTCAAAGTGAATTAAT  346

seq1  AAGTGAGAAGTTTTTAAATATGAGGTTTATTTTACTTAATGCATAACACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGAAGTTTTTAAATATGAGGTTTATTTTACTTAATGCATAACACA  396

seq1  CTCGGTGAACAACTTGTAAGAAATCACGTGAGAATTACCCTGGCAGAGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTGAACAACTTGTAAGAAATCACGTGAGAATTACCCTGGCAGAGTT  446

seq1  TGTTCTGGATCAGGGTGCTTATGTTACTATCCAAATCTAAGAATTATAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGGATCAGGGTGCTTATGTTACTATCCAAATCTAAGAATTATAAA  496

seq1  AGCCATAACTCAACTTTGGAGTTTTACTCTTAAAATAATAGAAACGTTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATAACTCAACTTTGGAGTTTTACTCTTAAAATAATAGAAACGTTTC  546

seq1  CTTTCTAAAGGGAGCTAAGCTAATTTTGCTTGACTCCAACAGGGTGGGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAAGGGAGCTAAGCTAATTTTGCTTGACTCCAACAGGGTGGGTT  596

seq1  TCATGTACTT-GGATGCTGTGTAATTTGTTGTTGACAAATCAGCTAAGAT  646
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCATGTACTTGGGATGCTGTGTAATTTGTTGTTGACAAATCAGCTAAGAT  646

seq1  TAAGCTCGTGTGTACTTGCCCGTACATACAGGAACAGATATAGTCAAACC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCGTGTGTACTTGCCCGTACATACAGGAACAGATATAGTCAAACC  696

seq1  CATTTTAAAGACACTTCAAAATATGCTCCATGTTTCTACTGTTATTCTAC  746
      |||||||||||||||||||||||||||||||| |||||||| ||||||||
seq2  CATTTTAAAGACACTTCAAAATATGCTCCATG-TTCTACTG-TATTCTAC  744

seq1  GTTAGTGCTTTTGCTCAA-GTGATGTTATAGAACAGAGATGTCTAAGAAC  795
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTTAGTGCTTTTGCTCAAGGTGATGTTATAGAACAGAGATGTCTAAGAAC  794

seq1  TGTGCATTCATGACAGGGATTGGCCA-CGTGAATGAAAAGCTCAGATGGG  844
      |||||||||||||||||||||||||| |||  ||||||||||||||||||
seq2  TGTGCATTCATGACAGGGATTGGCCACCGTTGATGAAAAGCTCAGATGGG  844

seq1  TGATG--AGGAAAAAGAAGTGCAGCAAGCAGACTGATG--AAACTCATG-  889
      |||||   |||||||||||||||||| |||||||||||  || |||||| 
seq2  TGATGGAGGGAAAAAGAAGTGCAGCAGGCAGACTGATGGAAACCTCATGA  894

seq1  ACTAGTG-ACAGCA  902
      ||||||| ||||||
seq2  ACTAGTGAACAGCA  908