BAC Information

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BAC

Clone NameB6Ng01-229N24
Chromosome7 (Build37)
Map Location 4,232,380 - 4,233,058
singlet/doubletsinglet
Overlap genenone
Upstream geneNlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801
Downstream geneNcr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229N24.bB6Ng01-229N24.g
ACCGA042889GA042890
length1,133339
definitionB6Ng01-229N24.b B6Ng01-229N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatctgtttcagaactactaagagctggcttcctgagctcat
ctagtgacgagtatctcctagagacctccgctaattgatctttcttcttt
tccctttttcctctttttcttctaatctctctccaggtattcctacctaa
ccttaacttttcctcgggttcaagacccttggaaaggcctgtatacttat
tttgtgtaccatatttcctctttgttcctactctctctccccgctttact
tctgatagcttgtcctgaatttcctctagaatccgccctatcttaaccac
ttgataacatgtgaaaaggaacaaaagggctcctaacaccagaaaaaatt
caaggccaaacattttccactttacttctgatagactgtcttgaatttcc
ttagaaagttcaagatcagacttacctcgtaaagctatactcactggtac
tctcgttccccagctgaaaagttctgaattcatacagttgaatccttctt
aacagtctgctttacgggaacctttattaccgcgacccgcagttctggtt
ctggaatgagggatcttccttgcgccagtcccgagtttttttctcgtccc
ggaattcggcaccaattgttattagacgcgttctcacgaccggccaggaa
agacgcaacaaaccagaatcttctgcggcaaagctttattgcttacatct
tcaggagccagagtgcaagagagcaagcaagcaaatggcgaaaccccatc
cctttttaaaggagaattatcctccacctaggatgtattactccctgatt
ggctgcagcccatcggcccagttgtcatcacgggaaaggcagaacacatg
ggtgggaaaactgcccctgcatgtgtgcagactatgttttaccacttaga
acacagctgtcagtgccatcttataatggcaaatgtgagggccggctcct
cacagaatctatgaatacaatgaaccaggctgtcattactgcccagccct
gtggtggagacaggaagggaacatgacactccacctgtgcctcacaagtc
actatgataaatcattctcaccacgaagatagaaatcgcacgcctgtaca
caggagcatatatctcctagttgaacagtaccg
ttcccaaatcctcattcttgctgatagaaggcaagaagaaaggaaggaag
gctatgaaagggaagctatcatttcaccaccagaagtagctatgattaaa
acaaaacaaaacaaaccaaaccaacctgggtgtggtggttttaatgagca
tggcccccatagacttatatgtttgaatgcttggtctccagttagtggaa
ctgtttgggaaggattaagaggtgtggccttgttggaggagatgtgtcat
tgaggtgtgtgtgtgaaaaactttcagatctttctttgacaccgtgcctg
actacctgccaccatgattaccactaagtaactctctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4232380_4233058
seq2: B6Ng01-229N24.b_501_1178

seq1  GTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCTTCTTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCTTCTTAACA  50

seq1  GTCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTTCTGG  100

seq1  AATGAGGGATCTTCCTTGCGCCAGTCCCGAGTTTTTTTCTCGTCCCGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGGATCTTCCTTGCGCCAGTCCCGAGTTTTTTTCTCGTCCCGGAA  150

seq1  TTCGGCACCAATTGTTATTAGACGCGTTCTCACGACCGGCCAGGAAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCACCAATTGTTATTAGACGCGTTCTCACGACCGGCCAGGAAAGAC  200

seq1  GCAACAAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAG  250

seq1  GAGCCAGAGTGCAAGAGAGCAAGCAAGCAAATGGCGAAACCCCATCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAGTGCAAGAGAGCAAGCAAGCAAATGGCGAAACCCCATCCCTT  300

seq1  TTT-AAGGAGAATTATCCTCCACCTAGGATGTATTACTCCCTGATTGGCT  349
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGAGAATTATCCTCCACCTAGGATGTATTACTCCCTGATTGGCT  350

seq1  GCAGCCCATCGGCCCAGTTGTCATCACGGGAAAGGCAGAACACAT-GGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCAGCCCATCGGCCCAGTTGTCATCACGGGAAAGGCAGAACACATGGGTG  400

seq1  GGAAAACTGCCCCTGCATGTGTGCAGACTATG-TTTACCACTTAGAACAC  447
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGAAAACTGCCCCTGCATGTGTGCAGACTATGTTTTACCACTTAGAACAC  450

seq1  AGCTGTCAGTGCCATCTTATAATGGCAAATGTGAGGG-CGGCTCCTCACA  496
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCTGTCAGTGCCATCTTATAATGGCAAATGTGAGGGCCGGCTCCTCACA  500

seq1  GAATCTATGAATACAATGAACCCAGGCTGTCATTACTGCCCAGCCCTGTG  546
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAATCTATGAATACAATGAA-CCAGGCTGTCATTACTGCCCAGCCCTGTG  549

seq1  GT-GAGACCAGGAGGGAACATGACACTCCA-CTGTGCCTCACAAGGTCAC  594
      || |||||  | |||||||||||||||||| ||||||||||||| |||||
seq2  GTGGAGACAGGAAGGGAACATGACACTCCACCTGTGCCTCACAA-GTCAC  598

seq1  TATGATAAATTCATTCTCACCAAGGAAGATAAGAAATTCGCCAACGCCCT  644
      ||||||||| ||||||||||| | |||||| ||||| ||||  ||| |||
seq2  TATGATAAA-TCATTCTCACC-ACGAAGAT-AGAAA-TCGC--ACG-CCT  641

seq1  GGACACA-GAGCATATATCTTCTAGTAG-ACAGTACC  679
      | ||||| |||||||||||| ||||| | ||||||||
seq2  GTACACAGGAGCATATATCTCCTAGTTGAACAGTACC  678