BAC Information

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BAC

Clone NameB6Ng01-229O21
Chromosome7 (Build37)
Map Location 50,532,066 - 50,732,711
singlet/doubletdoublet
Overlap geneZfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik
Upstream geneGprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620
Downstream gene4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229O21.bB6Ng01-229O21.g
ACCGA042927GA042928
length7891,165
definitionB6Ng01-229O21.b B6Ng01-229O21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,731,924 - 50,732,711)(50,532,066 - 50,533,223)
sequence
gaattctccgaacccccaaagaactctggaccctccctgaatgtgtctgt
ctttcctggatccttgaaagccaaaaaccaagatcctggtttcactccct
acttctaagtgggtcccctgagcatgacatgggagattccagaaccctag
gtctcctgcactccaaatcctaggcccctttccactgggttctgagctcc
ccagtccttagcttagccccaccctgcccccgcaggaccttcccggctcc
tactgacaggggcactccaggccctgctgtgcccgccccgctgatgtgtg
tccgtgttgtgcccgtgttgtcccgtgttaagtgtttgtgtccggccccg
ccccccacccccacctcccccacagacggtttcacctcagagggtgagat
cctggaaatctcagacatccagcggggccaggccggggaatacgaatgcg
ttactcacaacggagtgaactcggcgcccgacagccgccgtgtgctggtc
acagtgaattgtgagcatcaagggggccacaggggaggaccctgggtgaa
tggggaggaggggtctgcagcatgattgtggaagctaggtgggaactagg
atctgaggtgggagggtgctgaaatgggactccagaagtcctcatgcagg
gagaatgtgctctggcctctgtttccttttcagatcccccgaccatcaca
gatgtgacaagcgcgcgcaccgccctgggccgggctgccctcctgcgctg
tgaagctatggctgtgccgccggcagatttccagtggta
gaattcaaaattcagtcgctatagatacaagttgtgcatctagattggac
aaatgtgctctacattactcaatcatctatgaaatccccagctacttatg
gctcctaggaccacgtggttccggcttatcatcctctcccccagattcca
tcttgtttctcccatctgtctctctgtctctgtctctgtctctgtctctc
tctctctgttccccccaccccctctataactttcagttccgtcttccctt
ccactgcccaatcacaggctctaaccttatctgactaattaagatttcac
ctgaccacacccgaatacatacattcttgagagagcagaacacgcaaaca
actgtctacaacaaagcttcaggaactcagtttgaatccacctctctctt
gtcgaactgcctctagataagtgctgtcaatcagtagccagtttctccac
ctgcctacctcttctccctgactgtgggatctctccccttgtcccaggtt
ttgtagctctcttcccctactaccaggactatgggcctaaaagtaagaaa
aacttccccctgaacgccttaactttatcttctgcccctaatattggttt
cagcatcctgccaggttccgatgttccctcaaaatctgaatcctgggtaa
cttcaaagaggttagccccaggtggtccatcctcacagtctgcttcaact
aggcctgcactttaatagacccagatggtcccacagagccagaacaatga
ggaaaacagccgtgtcttccaggacttggccagcatcccagctttcttgg
gtccccaaagatgtcgacactgtcagaaagtaggaaacggtctaaaaagc
agcatcccgtttcctgcctcacccagtcaactcttcctaggtccttatat
tttataataaacacaaggaaaggaatgttagaactcaggcacacccacac
acactgcctgtcctcagagactcagtgctagcagctacatcattgctagt
caccaaacctttaaatggtccctgccatcacagtcagctctatctcctgg
tctgtctgttttctgttttcctgaactcgctgttcaccaccccccattcc
tagaatacctttttacttatccccccacccccacaatgatccttgtgtgg
aattctgttgcatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50731924_50732711
seq2: B6Ng01-229O21.b_51_839 (reverse)

seq1  TACCACTGGAAATCTGCCGGCGGCACAGCCATAGCTTCACAGCGCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTGGAAATCTGCCGGCGGCACAGCCATAGCTTCACAGCGCAGGAG  50

seq1  GGCAGCCCGGCCCAGGGCGGTGCGCGCGCTTGTCACATCTGTGATGGTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCCGGCCCAGGGCGGTGCGCGCGCTTGTCACATCTGTGATGGTCG  100

seq1  GGGGATCTGAAAAGG-AACAGAGGCCAGAGCACATTCTCCCTGCATGAGG  149
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGGGATCTGAAAAGGAAACAGAGGCCAGAGCACATTCTCCCTGCATGAGG  150

seq1  ACTTCTGGAGTCCCATTTCAGCACCCTCCCACCTCAGATCCTAGTTCCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGGAGTCCCATTTCAGCACCCTCCCACCTCAGATCCTAGTTCCCA  200

seq1  CCTAGCTTCCACAATCATGCTGCAGACCCCTCCTCCCCATTCACCCAGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTTCCACAATCATGCTGCAGACCCCTCCTCCCCATTCACCCAGGG  250

seq1  TCCTCCCCTGTGGCCCCCTTGATGCTCACAATTCACTGTGACCAGCACAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCTGTGGCCCCCTTGATGCTCACAATTCACTGTGACCAGCACAC  300

seq1  GGCGGCTGTCGGGCGCCGAGTTCACTCCGTTGTGAGTAACGCATTCGTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCTGTCGGGCGCCGAGTTCACTCCGTTGTGAGTAACGCATTCGTAT  350

seq1  TCCCCGGCCTGGCCCCGCTGGATGTCTGAGATTTCCAGGATCTCACCCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGGCCTGGCCCCGCTGGATGTCTGAGATTTCCAGGATCTCACCCTC  400

seq1  TGAGGTGAAACCGTCTGTGGGGGAGGTGGGGGTGGGGGGCGGGGCCGGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGAAACCGTCTGTGGGGGAGGTGGGGGTGGGGGGCGGGGCCGGAC  450

seq1  ACAAACACTTAACACGGGACAACACGGGCACAACACGGACACACATCAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACTTAACACGGGACAACACGGGCACAACACGGACACACATCAGC  500

seq1  GGGGCGGGCACAGCAGGGCCTGGAGTGCCCCTGTCAGTAGGAGCCGGGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGGGCACAGCAGGGCCTGGAGTGCCCCTGTCAGTAGGAGCCGGGAA  550

seq1  GGTCCTGCGGGGGCAGGGTGGGGCTAAGCTAAGGACTGGGGAGCTCAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGCGGGGGCAGGGTGGGGCTAAGCTAAGGACTGGGGAGCTCAGAA  600

seq1  CCCAGTGGAAAGGGGCCTAGGATTTGGAGTGCAGGAGACCTAGGGTTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGGAAAGGGGCCTAGGATTTGGAGTGCAGGAGACCTAGGGTTCTG  650

seq1  GAATCTCCCATGTCATGCTCAGGGGACCCACTTAGAAGTAGGGAGTGAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCCCATGTCATGCTCAGGGGACCCACTTAGAAGTAGGGAGTGAAA  700

seq1  CCAGGATCTTGGTTTTTGGCTTTCAAGGATCCAGGAAAGACAGACACATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATCTTGGTTTTTGGCTTTCAAGGATCCAGGAAAGACAGACACATT  750

seq1  CAGGGAGGGTCCAGAGTTCTTTGGGGGTTCGGAGAATTC  788
      |||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGGTCCAGAGTTCTTTGGGGGTTCGGAGAATTC  789

seq1: chr7_50532066_50533223
seq2: B6Ng01-229O21.g_71_1235

seq1  GAATTCAAAATTCAGTCGCTATAGATACAAGTTGTGCATCTAGATTGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTCAGTCGCTATAGATACAAGTTGTGCATCTAGATTGGAC  50

seq1  AAATGTGCTCTACATTACTCAATCATCTATGAAATCCCCAGCTACTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGCTCTACATTACTCAATCATCTATGAAATCCCCAGCTACTTATG  100

seq1  GCTCCTAGGACCACGTGGTTCCGGCTTATCATCCTCTCCCCCAGATTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAGGACCACGTGGTTCCGGCTTATCATCCTCTCCCCCAGATTCCA  150

seq1  TCTTGTTTCTCCCATCTGTCTCTCTGTCTCTGTCTCTGTCTCTGTCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTCTCCCATCTGTCTCTCTGTCTCTGTCTCTGTCTCTGTCTCTC  200

seq1  TCTCTCTGTTCCCCCCACCCCCTCTATAACTTTCAGTTCCGTCTTCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTTCCCCCCACCCCCTCTATAACTTTCAGTTCCGTCTTCCCTT  250

seq1  CCACTGCCCAATCACAGGCTCTAACCTTATCTGACTAATTAAGATTTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCCCAATCACAGGCTCTAACCTTATCTGACTAATTAAGATTTCAC  300

seq1  CTGACCACACCCGAATACATACATTCTTGAGAGAGCAGAACACGCAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCACACCCGAATACATACATTCTTGAGAGAGCAGAACACGCAAACA  350

seq1  ACTGTCTACAACAAAGCTTCAGGAACTCAGTTTGAATCCACCTCTCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTACAACAAAGCTTCAGGAACTCAGTTTGAATCCACCTCTCTCTT  400

seq1  GTCGAACTGCCTCTAGATAAGTGCTGTCAATCAGTAGCCAGTTTCTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAACTGCCTCTAGATAAGTGCTGTCAATCAGTAGCCAGTTTCTCCAC  450

seq1  CTGCCTACCTCTTCTCCCTGACTGTGGGATCTCTCCCCTTGTCCCAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTACCTCTTCTCCCTGACTGTGGGATCTCTCCCCTTGTCCCAGGTT  500

seq1  TTGTAGCTCTCTTCCCCTACTACCAGGACTATGGGCCTAAAAGTAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCTCTCTTCCCCTACTACCAGGACTATGGGCCTAAAAGTAAGAAA  550

seq1  AACTTCCCCCTGAACGCCTTAACTTTATCTTCTGCCCCTAATATTGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCCCCTGAACGCCTTAACTTTATCTTCTGCCCCTAATATTGGTTT  600

seq1  CAGCATCCTGCCAGGTTCCGATGTTCCCTCAAAATCTGAATCCTGGGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCCTGCCAGGTTCCGATGTTCCCTCAAAATCTGAATCCTGGGTAA  650

seq1  CTTCAAAGAGGTTAGCCCCAGGTGGTCCATCCTCACAGTCTGCTTCAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGAGGTTAGCCCCAGGTGGTCCATCCTCACAGTCTGCTTCAACT  700

seq1  AGGCCTGCACTTTAATAGACCCAGATGGTCCCACAGAGCCAGAACAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGCACTTTAATAGACCCAGATGGTCCCACAGAGCCAGAACAATGA  750

seq1  GGAAAACAGCCGTGTCTTCCAGGACTTGGCCAGCATCCCAGCTTTCTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAGCCGTGTCTTCCAGGACTTGGCCAGCATCCCAGCTTTCTTGG  800

seq1  GTCCCCAAAGATGTCGACACTGTCAGAAAGTAGGAAACGGTCTAAAAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAAAGATGTCGACACTGTCAGAAAGTAGGAAACGGTCTAAAAAGC  850

seq1  AGCATCCCGTTTCCTGCCTCACCCAGTCAACTCTTCCTAGGTCCTTATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCCGTTTCCTGCCTCACCCAGTCAACTCTTCCTAGGTCCTTATAT  900

seq1  TTTATAATAAACACAAGG-AAGGAATGTTAGAACTCAGGCACACCCACAC  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTATAATAAACACAAGGAAAGGAATGTTAGAACTCAGGCACACCCACAC  950

seq1  ACACTGCCTGTCCTCAGAGACTCAGTGCTAGCAGCTACATCATTGCTAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCCTGTCCTCAGAGACTCAGTGCTAGCAGCTACATCATTGCTAGT  1000

seq1  CACCAACCCTTTAAAAGGGTCCCCTGCCATCACAGTCAGCTCTATCTCCT  1049
      |||||| |||||||| ||   |||||||||||||||||||||||||||||
seq2  CACCAAACCTTTAAATGG--TCCCTGCCATCACAGTCAGCTCTATCTCCT  1048

seq1  GGTCTGTCTG-TTTCTGTTTCTCTG-ACTCGCTG-TCAC--ACCCCCATT  1094
      |||||||||| |||||||||  ||| |||||||| ||||   ||||||||
seq2  GGTCTGTCTGTTTTCTGTTTTCCTGAACTCGCTGTTCACCACCCCCCATT  1098

seq1  CCTAG-ATAACCTTTTAC---TACCCCCACCCCCACAATGAATCTCTTGT  1140
      ||||| ||| | ||||||   | ||||||||||||||||| ||| |||||
seq2  CCTAGAATACCTTTTTACTTATCCCCCCACCCCCACAATG-ATC-CTTGT  1146

seq1  GT-GAGATCTGTTGCATGG  1158
      || ||  ||||||||||||
seq2  GTGGAATTCTGTTGCATGG  1165